Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_H22
         (437 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   0.73 
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    24   0.73 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    24   0.73 
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   1.7  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   3.9  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   3.9  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   6.8  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.8 bits (49), Expect = 0.73
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -3

Query: 318 HISWSRPDIENNWFL 274
           H+ WS+PD+  N+++
Sbjct: 291 HLMWSKPDLIPNYYI 305


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 0.73
 Identities = 8/33 (24%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -3

Query: 357 VYILKIFASSNGG-HISWSRPDIENNWFLYPWY 262
           ++++ +   + GG + +WS+   +  +FL  WY
Sbjct: 136 IFVMHLMFDTLGGLYSTWSKKSKQVEYFLIHWY 168



 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/35 (22%), Positives = 17/35 (48%)
 Frame = -3

Query: 132 PVPLGQCGLNNCAAIFF*VLRFLQRNNYFKREIRL 28
           P+P+    + NC +  F +     ++N   RE ++
Sbjct: 272 PLPIVLSIVKNCLSYCFNLYHLASKSNQLSREAKV 306


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 0.73
 Identities = 8/33 (24%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -3

Query: 357 VYILKIFASSNGG-HISWSRPDIENNWFLYPWY 262
           ++++ +   + GG + +WS+   +  +FL  WY
Sbjct: 136 IFVMHLMFDTLGGLYSTWSKKSKQVEYFLIHWY 168



 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/35 (22%), Positives = 17/35 (48%)
 Frame = -3

Query: 132 PVPLGQCGLNNCAAIFF*VLRFLQRNNYFKREIRL 28
           P+P+    + NC +  F +     ++N   RE ++
Sbjct: 272 PLPIVLSIVKNCLSYCFNLYHLASKSNQLSREAKV 306


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 184 HQHCRVQNLTTPPTRAIPSP 125
           H    ++ +  PP R IPSP
Sbjct: 61  HHKAPIRPVALPPKREIPSP 80


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -3

Query: 282 WFLYPWYEEVGALTGYQILYT 220
           +F+Y ++++   LT  ++LYT
Sbjct: 20  FFIYLYWQQTSNLTTSKLLYT 40


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 327 NGGHISWSRPDIENNWFLYPWYE 259
           NG   SW +   E++WF    +E
Sbjct: 277 NGLETSWGKSRDESSWFYNSGWE 299


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 223 HQQIYQRLLLCDHHQHCRV 167
           H +IYQ LL   +H H ++
Sbjct: 77  HLRIYQTLLSGKNHPHIQL 95


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,032
Number of Sequences: 336
Number of extensions: 2777
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)