Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_H22
(437 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1782.06c |||prohibitin Phb1|Schizosaccharomyces pombe|chr 1|... 127 6e-31
SPCC1322.16 |phb2||prohibitin Phb2|Schizosaccharomyces pombe|chr... 121 4e-29
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 28 0.55
SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyc... 27 0.96
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 26 2.9
SPAC17G8.10c |dma1||mitotic spindle checkpoint protein Dma1|Schi... 25 3.9
SPCC970.02 |||mannan endo-1,6-alpha-mannosidase|Schizosaccharomy... 25 6.7
SPAC22H10.08 |||DUF2009 protein|Schizosaccharomyces pombe|chr 1|... 25 6.7
SPBC1709.14 |||peptide N-glycanase |Schizosaccharomyces pombe|ch... 24 8.9
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 24 8.9
>SPAC1782.06c |||prohibitin Phb1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 282
Score = 127 bits (307), Expect = 6e-31
Identities = 58/112 (51%), Positives = 78/112 (69%)
Frame = +1
Query: 100 VVQTALAKWDXXXXXXXXXXNSALYNVDGGHRAVIFDRFAGVKNLVTGEGTHFFIPWVQK 279
VV +A++ S++Y+V GG RAV+FDR +GV+ V EGTHF IPW+QK
Sbjct: 3 VVLERVARYAIPIGIGFTLLQSSIYDVPGGKRAVLFDRLSGVQKQVVQEGTHFLIPWLQK 62
Query: 280 PIIFDIRSRPRNVPTVTGSKDLQNVNITLRILFRPVPDQLPKIYTILGVDYD 435
I++D+R+RPRN+ T TGSKDLQ V++TLR+L RP LP+IY LG+DYD
Sbjct: 63 AIVYDVRTRPRNIATTTGSKDLQMVSLTLRVLHRPEVGMLPQIYQNLGLDYD 114
>SPCC1322.16 |phb2||prohibitin Phb2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 279
Score = 121 bits (292), Expect = 4e-29
Identities = 51/91 (56%), Positives = 69/91 (75%)
Frame = +1
Query: 163 SALYNVDGGHRAVIFDRFAGVKNLVTGEGTHFFIPWVQKPIIFDIRSRPRNVPTVTGSKD 342
++L+NVDGGHRA+ + R G+KNL+ EGTHF IPW++ I +D+R++PRN+ ++TG+KD
Sbjct: 34 TSLFNVDGGHRAIKYSRIGGIKNLIYPEGTHFLIPWIETAIDYDVRAKPRNISSLTGTKD 93
Query: 343 LQNVNITLRILFRPVPDQLPKIYTILGVDYD 435
LQ VNI R+L RP LPKIY LG DYD
Sbjct: 94 LQMVNINCRVLSRPDVHALPKIYRTLGGDYD 124
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 28.3 bits (60), Expect = 0.55
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 336 ASSNGGHISWSRPDIENNWFLYPWYEEVGALTGYQ 232
ASS+G IS D++N + W +E A +GY+
Sbjct: 1922 ASSHGDVISIDEEDLDNQGEEFEWEDEDNASSGYE 1956
>SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 581
Score = 27.5 bits (58), Expect = 0.96
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Frame = +1
Query: 250 THFFIPWVQKPIIFDIRSRPRNVP---TVTGSKDLQNV----NITLRILFRPVPDQLPKI 408
TH+ +P + P+ +DIR P T+T + + + + L IL VP LP I
Sbjct: 519 THYVLPTLLAPLGYDIREHPGGQQFWNTLTAKSEAKTIRSFTKLKLFILLIAVPFALPMI 578
Query: 409 YTI 417
I
Sbjct: 579 ILI 581
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 25.8 bits (54), Expect = 2.9
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 248 PSPVTKFFTPANLSKITAL*PPS 180
P P +KF + NLS I +L PPS
Sbjct: 576 PIPFSKFSSSENLSLIPSLLPPS 598
>SPAC17G8.10c |dma1||mitotic spindle checkpoint protein
Dma1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 25.4 bits (53), Expect = 3.9
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -3
Query: 396 LIRHWSEQYTKCDVYILKIFASSNGGHIS 310
L+R+W+ + +YI + NGG +S
Sbjct: 47 LVRYWNRKQNNLPIYIGRYTERYNGGDVS 75
>SPCC970.02 |||mannan endo-1,6-alpha-mannosidase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 442
Score = 24.6 bits (51), Expect = 6.7
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -3
Query: 273 YPWYEEVGALTGYQILYTSKSIKDYCS 193
Y W + +G + ++ SIKD CS
Sbjct: 212 YDWSQRIGFIQEDYTVFDGSSIKDNCS 238
>SPAC22H10.08 |||DUF2009 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 492
Score = 24.6 bits (51), Expect = 6.7
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 27 KAVFHV*NNYYVARIVKLRKRW 92
+AV H+ YY ++I K + RW
Sbjct: 217 RAVEHIAKKYYSSKITKEKVRW 238
>SPBC1709.14 |||peptide N-glycanase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 333
Score = 24.2 bits (50), Expect = 8.9
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -3
Query: 273 YPWYEEVGALTGYQILYTSKSIKDY 199
YP+Y EV ++ + +Y ++DY
Sbjct: 29 YPFYHEVRQMSQHPWMYEDPELQDY 53
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 24.2 bits (50), Expect = 8.9
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 151 PPTRAIPSPTWP 116
PP RA+P+PT P
Sbjct: 255 PPERALPAPTMP 266
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,019,250
Number of Sequences: 5004
Number of extensions: 43454
Number of successful extensions: 103
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 103
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 158122380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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