Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_H21
         (550 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    26   0.25 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   1.3  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    22   3.1  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   3.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   5.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   5.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.1  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 25.8 bits (54), Expect = 0.25
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +1

Query: 343 PLQLIKCTSSELLCSSAKYLCKWDWCSHRLCDNY 444
           P   +    +E+  S A   CK D+  H LCD Y
Sbjct: 458 PAPAVSNPQNEVDGSVAPKECKQDFMPHELCDKY 491


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 440 TTVDKLIIEHTETYPCIITRYSVLGRY 520
           T +   +  +T+TYP + T   V G+Y
Sbjct: 42  TRISSTVSRNTDTYPTLETCRLVCGKY 68


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +1

Query: 424 HRLCDNYC 447
           H LCDN+C
Sbjct: 9   HELCDNFC 16


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +1

Query: 424 HRLCDNYC 447
           H LCDN+C
Sbjct: 165 HELCDNFC 172


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -2

Query: 276 SIQKSFLYFGETVQPTNFFAS 214
           ++Q+ F Y  E+   +N+FA+
Sbjct: 553 NMQQQFAYIDESSNSSNYFAN 573



 Score = 20.6 bits (41), Expect = 9.4
 Identities = 6/20 (30%), Positives = 15/20 (75%)
 Frame = -3

Query: 485 KDMSQYVQLSTYQQ*LSHNL 426
           ++++QY+Q+   +Q L+H +
Sbjct: 753 ENVAQYLQIENVEQTLNHEI 772


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 412 DWCSHRLCDNYC**VDN 462
           DWCS   C+N    V N
Sbjct: 101 DWCSTNPCENQATCVQN 117


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 9/41 (21%), Positives = 20/41 (48%)
 Frame = +2

Query: 425 TDCVTTTVDKLIIEHTETYPCIITRYSVLGRYLRRILVHLE 547
           T  +    DK+ I H + +  ++  Y +LG  L  + + ++
Sbjct: 680 TKMIAHLKDKMKIRHRKRWSQVMYMYYLLGHRLMELPISVD 720


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 9/41 (21%), Positives = 20/41 (48%)
 Frame = +2

Query: 425 TDCVTTTVDKLIIEHTETYPCIITRYSVLGRYLRRILVHLE 547
           T  +    DK+ I H + +  ++  Y +LG  L  + + ++
Sbjct: 680 TKMIAHLKDKMKIRHRKRWSQVMYMYYLLGHRLMELPISVD 720


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 9/41 (21%), Positives = 20/41 (48%)
 Frame = +2

Query: 425 TDCVTTTVDKLIIEHTETYPCIITRYSVLGRYLRRILVHLE 547
           T  +    DK+ I H + +  ++  Y +LG  L  + + ++
Sbjct: 680 TKMIAHLKDKMKIRHRKRWSQVMYMYYLLGHRLMELPISVD 720


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 9/41 (21%), Positives = 20/41 (48%)
 Frame = +2

Query: 425 TDCVTTTVDKLIIEHTETYPCIITRYSVLGRYLRRILVHLE 547
           T  +    DK+ I H + +  ++  Y +LG  L  + + ++
Sbjct: 680 TKMIAHLKDKMKIRHRKRWSQVMYMYYLLGHRLMELPISVD 720


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,175
Number of Sequences: 336
Number of extensions: 2996
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)