Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_H21
         (550 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450 pr...    26   0.94 
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    24   2.9  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    24   3.8  
AF515526-1|AAM61893.1|  229|Anopheles gambiae glutathione S-tran...    23   6.6  
AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B...    23   8.8  
AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B...    23   8.8  

>AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 25.8 bits (54), Expect = 0.94
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -2

Query: 246 ETVQPTNFFASIFSKPYSRIKATTAIL*GVMFSMLPFTLI 127
           +T++PT  FA I  K Y R+K+    + G+ F   P  L+
Sbjct: 46  DTLKPTIHFAYIIEKLYKRLKSKGDYV-GIYFFRDPVLLV 84


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 294 CISLSASIQKSFLYFGETVQPTNFFASIFSK 202
           CIS+  S+   FL   E + PT+    +  K
Sbjct: 280 CISILVSLTVFFLLLAEIIPPTSLAVPLLGK 310


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 294 CISLSASIQKSFLYFGETVQPTNFFASIFSK 202
           CIS+  S+   FL   E + PT+    +  K
Sbjct: 274 CISILLSLTVFFLLLAEIIPPTSLTVPLLGK 304


>AF515526-1|AAM61893.1|  229|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 229

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -3

Query: 125 ISRSLKYHYPVPSQP 81
           +S++LKY+Y + SQP
Sbjct: 1   MSKNLKYYYDLMSQP 15


>AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B
           precursor protein.
          Length = 423

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 304 YGV*RTRNSPNRWPLQLIKCTSS 372
           YGV   RN P +W     +CT++
Sbjct: 253 YGVDLNRNFPFQWDRTTSECTNN 275


>AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B
           protein.
          Length = 423

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 304 YGV*RTRNSPNRWPLQLIKCTSS 372
           YGV   RN P +W     +CT++
Sbjct: 253 YGVDLNRNFPFQWDRTTSECTNN 275


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,345
Number of Sequences: 2352
Number of extensions: 12395
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)