Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_H21
         (550 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    23   2.0  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    23   2.0  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   6.2  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    21   6.2  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    21   6.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   6.2  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   6.2  

>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 179 VAFIREYGLLKMEAKKLVGCTVSPKY 256
           +AFI E G +    +K +G  V P+Y
Sbjct: 13  LAFIAEEGYVPSMREKFLGWNVPPEY 38


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 179 VAFIREYGLLKMEAKKLVGCTVSPKY 256
           +AFI E G +    +K +G  V P+Y
Sbjct: 13  LAFIAEEGYVPSMREKFLGWNVPPEY 38


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = -2

Query: 195 SRIKATTAIL*GVMFSMLPFTLINFTKSKISLSGSITTKEFTFLSQNCYVGSK 37
           SR     A +   M  +LP   +N+   +I +S +  + E T   Q C  G +
Sbjct: 354 SRFGEEKARMITTMSLLLPGVAVNYYGDEIGMSDTYISWEDTQDPQGCGAGKE 406


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +2

Query: 215 EAKKLVGCTVSPKYRKDFCMLALKLIQCPDMEFKELE 325
           +  +++   VS    +D CM+A K I C   + K L+
Sbjct: 91  DVHEIIEQCVSKAADEDECMVARKYIDCALEKMKFLD 127


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +2

Query: 215 EAKKLVGCTVSPKYRKDFCMLALKLIQCPDMEFKELE 325
           +  +++   VS    +D CM+A K I C   + K L+
Sbjct: 91  DVHEIIEQCVSKAADEDECMVARKYIDCALEKMKFLD 127


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 7/33 (21%), Positives = 17/33 (51%)
 Frame = +2

Query: 446 VDKLIIEHTETYPCIITRYSVLGRYLRRILVHL 544
           ++ L  +H   Y C+    +    + +R++VH+
Sbjct: 672 IEHLSPDHNGNYSCVARNLAAEVSHTQRLVVHV 704


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = -2

Query: 195 SRIKATTAIL*GVMFSMLPFTLINFTKSKISLSGSITTKEFTFLSQNCYVGSK 37
           SR     A +   M  +LP   +N+   +I +S +  + E T   Q C  G +
Sbjct: 354 SRFGEEKARMITTMSLLLPGVAVNYYGDEIGMSDTYISWEDTQDPQGCGAGKE 406


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,661
Number of Sequences: 438
Number of extensions: 3275
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)