Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_H20
(522 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 22 3.3
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 22 3.3
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 22 4.4
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 5.8
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 5.8
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 21 7.7
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 7.7
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 7.7
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 7.7
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 7.7
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 7.7
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 22.2 bits (45), Expect = 3.3
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 417 RRAREGSHRFNIKRSCTGTNGDN 485
+RAR G H KR G G N
Sbjct: 253 KRARMGFHGMRGKRDAAGIYGSN 275
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 22.2 bits (45), Expect = 3.3
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 417 RRAREGSHRFNIKRSCTGTNGDN 485
+RAR G H KR G G N
Sbjct: 253 KRARMGFHGMRGKRDAAGIYGSN 275
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 21.8 bits (44), Expect = 4.4
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +1
Query: 229 GACDGLARVTDCRAADAHRSWQL-AGEIE 312
G CDGL V + + R W L +G+++
Sbjct: 240 GNCDGLTSVFRIQVDECDRLWILDSGKVD 268
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 5.8
Identities = 10/24 (41%), Positives = 11/24 (45%), Gaps = 4/24 (16%)
Frame = -2
Query: 227 DSSVC----ASSGWNDNDCTLSWK 168
D VC AS GW +D WK
Sbjct: 170 DRQVCSLRMASYGWTTDDLVFLWK 193
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 5.8
Identities = 10/24 (41%), Positives = 11/24 (45%), Gaps = 4/24 (16%)
Frame = -2
Query: 227 DSSVC----ASSGWNDNDCTLSWK 168
D VC AS GW +D WK
Sbjct: 170 DRQVCSLRMASYGWTTDDLVFLWK 193
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 21.0 bits (42), Expect = 7.7
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +2
Query: 5 EEIKRKKLNESDTRTLCSICRGIGILHIY*R 97
E R+K N+ T C CR G Y R
Sbjct: 24 ETTPRRKKNKKPLPTECVFCRNNGEEEAYYR 54
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -3
Query: 181 PYPGSSPVS-YAVYPDLNPKATPYY 110
P+P P + Y P LNP+ P Y
Sbjct: 371 PFPRFIPPNAYRFRPPLNPRFGPTY 395
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -3
Query: 181 PYPGSSPVS-YAVYPDLNPKATPYY 110
P+P P + Y P LNP+ P Y
Sbjct: 382 PFPRFIPPNAYRFRPPLNPRFGPTY 406
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -3
Query: 181 PYPGSSPVS-YAVYPDLNPKATPYY 110
P+P P + Y P LNP+ P Y
Sbjct: 382 PFPRFIPPNAYRFRPPLNPRFGPTY 406
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -3
Query: 181 PYPGSSPVS-YAVYPDLNPKATPYY 110
P+P P + Y P LNP+ P Y
Sbjct: 371 PFPRFIPPNAYRFRPPLNPRFGPTY 395
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.0 bits (42), Expect = 7.7
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = -3
Query: 499 YRLYWLSPLVPVHDRLILNR*LPSRARLESKAGRRACSPRSPLYL 365
Y ++ L HD + + +P R KA + SPR Y+
Sbjct: 590 YPVHTFGRLTSKHDNSLYDEYIPFLERELRKAHQEKDSPRIQTYI 634
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,711
Number of Sequences: 438
Number of extensions: 2217
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -