Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_H19
(495 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 220 6e-58
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 220 6e-58
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 218 2e-57
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 217 4e-57
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 217 4e-57
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 217 5e-57
03_01_0034 + 318432-318825,318902-319851 212 1e-55
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 208 1e-54
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 112 1e-25
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 105 2e-23
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 100 7e-22
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 95 4e-20
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 77 1e-14
09_04_0325 + 16689613-16689772,16690043-16690329 30 0.89
12_02_0931 + 24512496-24512567,24512705-24512806,24512939-245129... 28 3.6
03_02_0319 - 7421357-7421757,7421768-7421843,7424695-7424796,742... 28 4.7
11_06_0061 - 19702893-19703869,19703960-19704098,19704166-197042... 27 6.3
07_03_0252 - 15846143-15848473 27 6.3
07_01_1133 - 10550799-10551137,10552195-10552254,10555693-105574... 27 6.3
04_04_0672 + 27164628-27164792,27164903-27164965,27165298-271654... 27 6.3
01_01_0624 - 4696314-4696608,4696704-4697394,4699525-4699540,469... 27 6.3
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 27 8.3
08_01_0554 - 4851698-4851943,4852041-4852760 27 8.3
06_03_0964 - 26372924-26372990,26373172-26373686 27 8.3
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 220 bits (537), Expect = 6e-58
Identities = 99/124 (79%), Positives = 111/124 (89%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 301
MREI+H+Q GQCGNQIGAKFWE+I +EHGID TG Y G SDLQLERI+VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEAS----- 55
Query: 302 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 481
GG+YVPRA+L+DLEPGTMD+VRSG YGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 56 -GGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 482 AVLD 493
+VLD
Sbjct: 115 SVLD 118
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 220 bits (537), Expect = 6e-58
Identities = 96/125 (76%), Positives = 113/125 (90%)
Frame = +2
Query: 119 KMREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATA 298
KMREI+H+Q GQCGNQIG+KFWE++ +EHGIDPTG Y GTSDLQLER++VYYNEAS
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASC--- 236
Query: 299 ESGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELV 478
G++VPRA+L+DLEPGTMD+VR+G YGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+
Sbjct: 237 ---GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELI 293
Query: 479 DAVLD 493
D+VLD
Sbjct: 294 DSVLD 298
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 218 bits (532), Expect = 2e-57
Identities = 97/124 (78%), Positives = 111/124 (89%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 301
MREI+H+Q GQCGNQIGAKFWE+I +EHG+D TG Y G SDLQLERI+VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEAS----- 55
Query: 302 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 481
GG+YVPRA+L+DLEPGTMD+VRSG +GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 56 -GGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 482 AVLD 493
+VLD
Sbjct: 115 SVLD 118
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 217 bits (530), Expect = 4e-57
Identities = 95/124 (76%), Positives = 111/124 (89%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 301
MREI+H+Q GQCGNQIGAKFWE++ +EHGIDPTG Y G SDLQLER++VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASC---- 56
Query: 302 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 481
G++VPRA+L+DLEPGTMD+VR+G YGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 57 --GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 482 AVLD 493
+VLD
Sbjct: 115 SVLD 118
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 217 bits (530), Expect = 4e-57
Identities = 95/124 (76%), Positives = 112/124 (90%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 301
MREI+H+Q GQCGNQIG+KFWE++ +EHGIDPTG Y GTSDLQLER++VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASC---- 56
Query: 302 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 481
G++VPRA+L+DLEPGTMD+VR+G YGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 57 --GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 482 AVLD 493
+VLD
Sbjct: 115 SVLD 118
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 217 bits (529), Expect = 5e-57
Identities = 97/124 (78%), Positives = 111/124 (89%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 301
MREI+H+Q GQCGNQIGAKFWE+I +EHGID TG Y G SDLQLERI+VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEAS----- 55
Query: 302 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 481
GG++VPRA+L+DLEPGTMD+VRSG +GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 56 -GGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 482 AVLD 493
+VLD
Sbjct: 115 SVLD 118
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 212 bits (518), Expect = 1e-55
Identities = 95/124 (76%), Positives = 108/124 (87%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 301
MREI+H+Q GQCGNQIGAKFWE++ EHGID TG Y G SDLQLER++VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASC---- 56
Query: 302 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 481
G++VPRA+L+DLEPGTMD+VRSG YG +FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 57 --GRFVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 482 AVLD 493
AVLD
Sbjct: 115 AVLD 118
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 208 bits (509), Expect = 1e-54
Identities = 93/124 (75%), Positives = 108/124 (87%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 301
MREI+H+Q GQCGNQIGAKFWE+I EHG+DPTG Y GTS QLERI+VY+NEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEAS----- 55
Query: 302 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 481
GG++VPRA+L+DLEPGTMD++RSG G +FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 56 -GGRHVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 482 AVLD 493
+VLD
Sbjct: 115 SVLD 118
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 112 bits (270), Expect = 1e-25
Identities = 57/125 (45%), Positives = 78/125 (62%), Gaps = 1/125 (0%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 301
MREI+ + GQ G Q+G WE+ EHGI+P G SD + V ++ + +E
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTM--PSDTT---VGVAHDAFNTFFSE 55
Query: 302 SG-GKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELV 478
+G GK+VPRAI +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E+V
Sbjct: 56 TGAGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIV 115
Query: 479 DAVLD 493
D LD
Sbjct: 116 DLCLD 120
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 105 bits (252), Expect = 2e-23
Identities = 52/126 (41%), Positives = 73/126 (57%), Gaps = 2/126 (1%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQL--ERISVYYNEASVAT 295
MRE + + GQ G Q+G WE+ EHGI P G G + + + +++E
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGA-- 58
Query: 296 AESGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 475
GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E+
Sbjct: 59 ----GKHVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEI 114
Query: 476 VDAVLD 493
VD LD
Sbjct: 115 VDLCLD 120
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 100 bits (239), Expect = 7e-22
Identities = 53/124 (42%), Positives = 71/124 (57%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 301
MRE + + GQ G Q+G WE+ EHGI G + SD + +N T
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADG--QMPSDRTVGGGDDAFNTFFSETG- 57
Query: 302 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 481
GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 58 -AGKHVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVD 116
Query: 482 AVLD 493
LD
Sbjct: 117 LCLD 120
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 94.7 bits (225), Expect = 4e-20
Identities = 47/125 (37%), Positives = 74/125 (59%), Gaps = 2/125 (1%)
Frame = +2
Query: 125 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAES 304
REI+ +Q GQCGNQIG +FW+ + EHGI G+ + +R V++ +A
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQA------D 56
Query: 305 GGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQ--SGAGNNWAKGHYTEGAELV 478
Y+PRA+L+DLEP ++ +++ Y L+ +N + GAGNNWA G Y +G ++V
Sbjct: 57 DQHYIPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVV 115
Query: 479 DAVLD 493
D ++D
Sbjct: 116 DDIMD 120
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 76.6 bits (180), Expect = 1e-14
Identities = 33/64 (51%), Positives = 45/64 (70%)
Frame = +2
Query: 302 SGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 481
S GK+VPRA+ +DLEP +D V++G Y QLF P+ + + A NN+A+GHYT G E+VD
Sbjct: 117 SSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVD 176
Query: 482 AVLD 493
LD
Sbjct: 177 LCLD 180
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGV 226
MREI+ + GQ G Q+G WE+ EHGI P G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGL 35
>09_04_0325 + 16689613-16689772,16690043-16690329
Length = 148
Score = 30.3 bits (65), Expect = 0.89
Identities = 14/19 (73%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = +2
Query: 392 FRPDNFVFGQSGAGN-NWA 445
F PDNFVF QS AG NWA
Sbjct: 129 FNPDNFVFHQSVAGGINWA 147
>12_02_0931 +
24512496-24512567,24512705-24512806,24512939-24512984,
24513292-24513355,24513997-24514348,24514497-24514749,
24515069-24515311,24515399-24515518,24515710-24516158
Length = 566
Score = 28.3 bits (60), Expect = 3.6
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIISEEHGI--DPTG--VYRGTSDLQLERISVYYNEASV 289
MRE V +Q G N +G+ FW E G+ DP V++ + L ++ V Y S
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGLADDPDADPVFKNAA-LDMD---VLYR--SG 54
Query: 290 ATAESGGKYVPRAILLD 340
T + Y PR + +D
Sbjct: 55 ETHQGVATYCPRLVSVD 71
>03_02_0319 -
7421357-7421757,7421768-7421843,7424695-7424796,
7424911-7424982
Length = 216
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 122 MREIVHLQAGQCGNQIGAKFWEIISEEHGI 211
MRE V +Q G N +G+ FW E G+
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGL 30
>11_06_0061 -
19702893-19703869,19703960-19704098,19704166-19704287,
19704362-19704416,19704508-19704624,19704718-19705413,
19706358-19706393,19707190-19708236
Length = 1062
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 391 ELPVAAGADGVHGPWFEVEEYG 326
E+ V ADG HG WFE G
Sbjct: 57 EVEVRVDADGFHGSWFEAVVVG 78
>07_03_0252 - 15846143-15848473
Length = 776
Score = 27.5 bits (58), Expect = 6.3
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 200 EHGIDPTGVYRGTSDLQLERISVYYNEASVATAESGGKYVPRAILLDLEPGTMD-AVRSG 376
+ GID T G D +ER + + + A E G + A ++DL PG D A
Sbjct: 494 DSGIDFTA---GAHDSGMERATPWTPMSEAALFEQQGPPLAPAAVVDLPPGNADCADHQS 550
Query: 377 GYGQL 391
YG +
Sbjct: 551 SYGDM 555
>07_01_1133 -
10550799-10551137,10552195-10552254,10555693-10557401,
10557534-10557616,10577533-10578074
Length = 910
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 158 GNQIGAKFWEIISEEHG--IDPTGVYRGTSDLQLERIS 265
G+Q +KFW+ + EE G ++ + Y +D Q ER++
Sbjct: 540 GSQFTSKFWQKLQEEMGTHLNFSTAYHPQTDGQTERVN 577
>04_04_0672 +
27164628-27164792,27164903-27164965,27165298-27165408,
27165454-27165537,27166081-27166194,27166901-27167494,
27167604-27167675,27167761-27167997
Length = 479
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 344 RGRGVWREARTCHRSPPSQQRP-HYNKRRFSRVVNR 240
R R W E + H+ +++RP H N RR R R
Sbjct: 48 RSRSTWAEVVSDHKGGEAEERPDHRNSRRDGRQERR 83
>01_01_0624 -
4696314-4696608,4696704-4697394,4699525-4699540,
4699577-4699630,4699741-4699809
Length = 374
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -3
Query: 394 EELPVAAGADGVHGPWFEVE 335
+E VAA DG HGPW VE
Sbjct: 107 QERLVAARPDGSHGPWSYVE 126
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 158 GNQIGAKFWEIISEEHG--IDPTGVYRGTSDLQLERIS 265
G+Q +KFW+ + EE G ++ + Y +D Q ER++
Sbjct: 331 GSQFTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVN 368
>08_01_0554 - 4851698-4851943,4852041-4852760
Length = 321
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/22 (63%), Positives = 17/22 (77%), Gaps = 2/22 (9%)
Frame = -3
Query: 412 DEVVWAEELPVAAGAD--GVHG 353
D +V A+E+PVAAGAD G HG
Sbjct: 244 DVLVGAKEVPVAAGADSGGGHG 265
>06_03_0964 - 26372924-26372990,26373172-26373686
Length = 193
Score = 27.1 bits (57), Expect = 8.3
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 284 SVATAESGGKYVPRAILLDLEPGTMDAVRSGGYGQLFRPDNFVFGQSGAG 433
++ATA GG P+AI+L +P + A R+ G++ R +SGAG
Sbjct: 52 AMATARGGGARWPKAIVLQQQPASTTA-RARRCGRIVRRCCGRKTRSGAG 100
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,646,126
Number of Sequences: 37544
Number of extensions: 238390
Number of successful extensions: 860
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1035514020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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