Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_H18
         (561 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.59 
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    23   2.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   5.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   5.5  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   7.2  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   9.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.59
 Identities = 8/24 (33%), Positives = 18/24 (75%)
 Frame = +1

Query: 157 FPVNKNLLIKQTLSMMFRITYVIV 228
           FP++ +L+  +T  ++F+IT V++
Sbjct: 701 FPIDYSLVFSETKLLLFKITSVMI 724


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 88  GMVAARAFSTNIASSKCAYGLMFVA 14
           GM+ + A S  IAS K +Y +  VA
Sbjct: 174 GMILSAAVSGGIASCKLSYDIAKVA 198


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +3

Query: 252 IILEEIQPTLKTNIDQETVNEVSNEEIQRLVVDLNNP 362
           + L + Q TLK+ + +E+    S +++  +V  L NP
Sbjct: 347 VALRQEQETLKSQVQRESDVVDSLKDVIEIVDKLLNP 383


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -2

Query: 311 INRFLIYICLQRWLDFFENYLNGDIFCNTIT*VILN 204
           I  F+I IC +R L +   Y   +   + +  V+LN
Sbjct: 4   ITLFMIIICFERNLSYKVMYNGNNNVTDLVEYVLLN 39


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +3

Query: 96  IQPETEKELISDDIRS 143
           IQ ET+ E++SD +R+
Sbjct: 194 IQIETQCEIVSDTLRN 209


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 532 FSLFSDKF*IPSVTPWKPC 476
           FSL  D   +PS+ P+ PC
Sbjct: 48  FSLPLDLEPLPSLFPFSPC 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,849
Number of Sequences: 336
Number of extensions: 2633
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)