Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_H17
         (481 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   0.84 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   3.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   3.4  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   4.5  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.8 bits (49), Expect = 0.84
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = -2

Query: 330 LFNG---SSNVYINCLLNIMTISINLNTKITN*LLFISFLHYLHTRKFIN 190
           LF+G   S N +   L+ ++++S N    I   +L ISF+H    + F+N
Sbjct: 67  LFDGQLYSFNTFAKLLIFVVSLSGNSAVFI---MLIISFMHKKSFKNFVN 113


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 13  LYMLCLIYLVMS*KISFITYPII 81
           L+    +Y V + K SF+T P+I
Sbjct: 267 LFQAYYLYYVATGKASFVTVPMI 289


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 13  LYMLCLIYLVMS*KISFITYPII 81
           L+    +Y V + K SF+T P+I
Sbjct: 267 LFQAYYLYYVATGKASFVTVPMI 289


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = -1

Query: 418 TLSSGVFKHSLTNITTSYKHIVRQTLHFKFV*RFFKRIYKLFIEHNDNF 272
           T +  +   +LTN+       +R TL   F     K +Y L  E  +NF
Sbjct: 66  TNTEPLLSEALTNLPGEKWKEMRATLSPAFTSSKIKNMYSLISECAENF 114


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,157
Number of Sequences: 336
Number of extensions: 2051
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)