Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_H17
         (481 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041098-1|AAH41098.1| 1531|Homo sapiens UDP-glucose ceramide gl...    29   6.4  
AK023671-1|BAB14632.1|  817|Homo sapiens protein ( Homo sapiens ...    29   6.4  
AF227905-1|AAF66232.1| 1555|Homo sapiens UDP-glucose:glycoprotei...    29   6.4  
AC017079-1|AAY14735.1|  842|Homo sapiens unknown protein.              29   6.4  

>BC041098-1|AAH41098.1| 1531|Homo sapiens UDP-glucose ceramide
            glucosyltransferase-like 1 protein.
          Length = 1531

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = -2

Query: 351  DKHYILNLFNGSSNVYINCLLNIMTISINLNTKITN*LLFISFLHYLHTRKFINYMLIKY 172
            DK  I+N+F+ +S       L IM +S+  NTK      F+        ++FI YM  +Y
Sbjct: 1227 DKDDIINIFSVASGHLYERFLRIMMLSVLKNTKTPVKFWFLKNYLSPTFKEFIPYMANEY 1286

Query: 171  S 169
            +
Sbjct: 1287 N 1287


>AK023671-1|BAB14632.1|  817|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13609 fis, clone PLACE1010662, moderately
           similar to UDP-GLUCOSE:GLYCOPROTEIN GLUCOSYLTRANSFERASE
           PRECURSOR ).
          Length = 817

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = -2

Query: 351 DKHYILNLFNGSSNVYINCLLNIMTISINLNTKITN*LLFISFLHYLHTRKFINYMLIKY 172
           DK  I+N+F+ +S       L IM +S+  NTK      F+        ++FI YM  +Y
Sbjct: 513 DKDDIINIFSVASGHLYERFLRIMMLSVLKNTKTPVKFWFLKNYLSPTFKEFIPYMANEY 572

Query: 171 S 169
           +
Sbjct: 573 N 573


>AF227905-1|AAF66232.1| 1555|Homo sapiens UDP-glucose:glycoprotein
            glucosyltransferase 1 precursor protein.
          Length = 1555

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = -2

Query: 351  DKHYILNLFNGSSNVYINCLLNIMTISINLNTKITN*LLFISFLHYLHTRKFINYMLIKY 172
            DK  I+N+F+ +S       L IM +S+  NTK      F+        ++FI YM  +Y
Sbjct: 1251 DKDDIINIFSVASGHLYERFLRIMMLSVLKNTKTPVKFWFLKNYLSPTFKEFIPYMANEY 1310

Query: 171  S 169
            +
Sbjct: 1311 N 1311


>AC017079-1|AAY14735.1|  842|Homo sapiens unknown protein.
          Length = 842

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = -2

Query: 351 DKHYILNLFNGSSNVYINCLLNIMTISINLNTKITN*LLFISFLHYLHTRKFINYMLIKY 172
           DK  I+N+F+ +S       L IM +S+  NTK      F+        ++FI YM  +Y
Sbjct: 538 DKDDIINIFSVASGHLYERFLRIMMLSVLKNTKTPVKFWFLKNYLSPTFKEFIPYMANEY 597

Query: 171 S 169
           +
Sbjct: 598 N 598


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,831,008
Number of Sequences: 237096
Number of extensions: 946363
Number of successful extensions: 4735
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4735
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)