Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_H17
         (481 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY044166-1|AAK98804.1|  422|Drosophila melanogaster potassium in...    30   1.4  
AJ344344-1|CAC87637.1|  532|Drosophila melanogaster inwardly rec...    30   1.4  
AE014297-3286|AAF56107.1|  532|Drosophila melanogaster CG6747-PA...    30   1.4  
AE014134-2751|AAN10956.2|  826|Drosophila melanogaster CG31782-P...    30   1.9  
AE014134-2750|AAN10955.1|  656|Drosophila melanogaster CG31782-P...    30   1.9  
BT029920-1|ABM92794.1|  535|Drosophila melanogaster IP03029p pro...    29   2.5  

>AY044166-1|AAK98804.1|  422|Drosophila melanogaster potassium
           inwardly rectifyingchannel DIR protein.
          Length = 422

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +3

Query: 270 WKLSLCSINNL-YIRLKNR*TNLKCNVCRTMCLYEVVMLVSECLNTPDDRVP*SYKNR 440
           W +   + N+L Y  LKN+  +L  N+  T+C+ +V  ++S  L + + +    Y NR
Sbjct: 80  WWIIAYAHNDLEYTNLKNQSPDLVANITHTVCVTQVSNMMSAFLYSVETQTTIGYGNR 137


>AJ344344-1|CAC87637.1|  532|Drosophila melanogaster inwardly
           rectifying K+ channelprotein protein.
          Length = 532

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +3

Query: 270 WKLSLCSINNL-YIRLKNR*TNLKCNVCRTMCLYEVVMLVSECLNTPDDRVP*SYKNR 440
           W +   + N+L Y  LKN+  +L  N+  T+C+ +V  ++S  L + + +    Y NR
Sbjct: 80  WWIIAYAHNDLEYTNLKNQSPDLVANITHTVCVTQVSNMMSAFLYSVETQTTIGYGNR 137


>AE014297-3286|AAF56107.1|  532|Drosophila melanogaster CG6747-PA
           protein.
          Length = 532

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +3

Query: 270 WKLSLCSINNL-YIRLKNR*TNLKCNVCRTMCLYEVVMLVSECLNTPDDRVP*SYKNR 440
           W +   + N+L Y  LKN+  +L  N+  T+C+ +V  ++S  L + + +    Y NR
Sbjct: 80  WWIIAYAHNDLEYTNLKNQSPDLVANITHTVCVTQVSNMMSAFLYSVETQTTIGYGNR 137


>AE014134-2751|AAN10956.2|  826|Drosophila melanogaster CG31782-PB,
           isoform B protein.
          Length = 826

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +3

Query: 309 RLKNR*TNLKCNVCRTMCLYEV-VMLVSECLNTPDD 413
           R+K+  +   C  CR +CLY + V+L + CL+T ++
Sbjct: 520 RVKSAGSKFTCTYCRKICLYLLFVLLQNTCLSTREN 555


>AE014134-2750|AAN10955.1|  656|Drosophila melanogaster CG31782-PA,
           isoform A protein.
          Length = 656

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +3

Query: 309 RLKNR*TNLKCNVCRTMCLYEV-VMLVSECLNTPDD 413
           R+K+  +   C  CR +CLY + V+L + CL+T ++
Sbjct: 350 RVKSAGSKFTCTYCRKICLYLLFVLLQNTCLSTREN 385


>BT029920-1|ABM92794.1|  535|Drosophila melanogaster IP03029p
           protein.
          Length = 535

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +3

Query: 270 WKLSLCSINNL-YIRLKNR*TNLKCNVCRTMCLYEVVMLVSECLNTPDDRVP*SYKNR 440
           W +   + N+L Y  LKN+  +L  N+  T+C+ +V  ++S  L + + +    Y NR
Sbjct: 83  WWIIAYAHNDLEYTNLKNQSPDLVANMTHTVCVTQVSNMMSAFLYSVETQTTIGYGNR 140


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,920,574
Number of Sequences: 53049
Number of extensions: 285776
Number of successful extensions: 372
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)