Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_H17
         (481 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   3.0  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   3.9  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               22   3.9  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   6.9  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   6.9  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 58   KSFMTSLGILDKAYIASCR 2
            K  M  LG+LDK ++A  R
Sbjct: 1020 KEEMVELGVLDKIFLALSR 1038


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -3

Query: 239 YYLFHSYI 216
           YYLFH+YI
Sbjct: 246 YYLFHTYI 253


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 61 MKSFMTSLGILDK 23
          +K FMT  GILDK
Sbjct: 59 LKCFMTKHGILDK 71


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = -3

Query: 80  IMGYVMNEIFYDITRYIRQS 21
           ++G + + +FY I+RY+ +S
Sbjct: 337 VLGAIGSIVFYIISRYVFRS 356


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 97  YLTKWQ*WDM 68
           YL KW+ WD+
Sbjct: 261 YLIKWKNWDL 270


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,911
Number of Sequences: 438
Number of extensions: 2321
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)