Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_H16
(614 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 110 9e-25
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 93 1e-19
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 56 2e-14
Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical pr... 31 0.65
AL034489-6|CAA22468.1| 157|Caenorhabditis elegans Hypothetical ... 31 0.86
L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical pr... 29 3.5
L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 29 3.5
Z77135-2|CAB00879.1| 769|Caenorhabditis elegans Hypothetical pr... 28 4.6
AF014940-5|AAB63937.1| 203|Caenorhabditis elegans Suppressor/en... 27 8.1
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 110 bits (264), Expect = 9e-25
Identities = 71/200 (35%), Positives = 100/200 (50%)
Frame = +2
Query: 5 EVYTYPENFRAYKALIAAQYSGANVKVAPDFVFGETNKTENFLKKFPAGKVPAFESADGK 184
++Y +NFR K LIAA+ + V +A D + KFP G PAFE G
Sbjct: 4 KLYGNKDNFRTQKVLIAAKLANKTVTLAGDAAPAD---------KFPLGVTPAFE---GD 51
Query: 185 VLLTESNAIAYYVANDDLRGGDLATQARVLQWASWADSELLPASCAWVFPYLGIMQFNKQ 364
LL + +I ++ + A +QW +A+ LLPA +V P + F+K+
Sbjct: 52 ALLFGAESIGLHLTGT-------SANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKK 104
Query: 365 NVERAKNXXXXXXXXXXXXXXSRTFLVTERITLADIIVYSTLLHAFQHVLDPTVRSKLVN 544
VE+ KN +T+LV ER++LAD+ V LL AFQ+VLD R +VN
Sbjct: 105 TVEQYKNELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQYVLDANARKSIVN 164
Query: 545 VQRWFLTVGHQPQVSSVVRE 604
V RWF TV +QP V V+ E
Sbjct: 165 VTRWFRTVVNQPAVKEVLGE 184
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 93.5 bits (222), Expect = 1e-19
Identities = 50/136 (36%), Positives = 72/136 (52%)
Frame = +2
Query: 197 ESNAIAYYVANDDLRGGDLATQARVLQWASWADSELLPASCAWVFPYLGIMQFNKQNVER 376
E +A+ + + L + A +QW +A+ LLPA +V P + F+K+ VE+
Sbjct: 24 EGDALLFGAESIGLHLTGTSANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQ 83
Query: 377 AKNXXXXXXXXXXXXXXSRTFLVTERITLADIIVYSTLLHAFQHVLDPTVRSKLVNVQRW 556
KN +T+LV ER++LAD+ V LL AFQ+VLD R +VNV RW
Sbjct: 84 YKNELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQYVLDANARKSIVNVTRW 143
Query: 557 FLTVGHQPQVSSVVRE 604
F TV +QP V V+ E
Sbjct: 144 FRTVVNQPAVKEVLGE 159
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 56.0 bits (129), Expect(2) = 2e-14
Identities = 40/127 (31%), Positives = 60/127 (47%)
Frame = +2
Query: 5 EVYTYPENFRAYKALIAAQYSGANVKVAPDFVFGETNKTENFLKKFPAGKVPAFESADGK 184
++Y +NFR K LIAA+ + V +A D + KFP G PAFE G
Sbjct: 4 KLYGNKDNFRTQKVLIAAKLANKTVTLAGDAAPAD---------KFPLGVTPAFE---GD 51
Query: 185 VLLTESNAIAYYVANDDLRGGDLATQARVLQWASWADSELLPASCAWVFPYLGIMQFNKQ 364
LL + +I ++ + A +QW +A+ LLPA +V P + F+K+
Sbjct: 52 ALLFGAESIGLHLTGT-------SANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKK 104
Query: 365 NVERAKN 385
VE+ KN
Sbjct: 105 TVEQYKN 111
Score = 40.3 bits (90), Expect(2) = 2e-14
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +2
Query: 503 QHVLDPTVRSKLVNVQRWFLTVGHQPQVSSVVRE 604
Q+VLD R +VNV RWF TV +QP V V+ E
Sbjct: 118 QYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGE 151
>Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical
protein F13A7.10 protein.
Length = 254
Score = 31.1 bits (67), Expect = 0.65
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Frame = +2
Query: 20 PENFRAYKALI--AAQYS--GANVKVAPDFVFGET--NKTENFLKKFPAGKVPAFESADG 181
P FR Y AAQ + A+VK P V K + + K G+VP E A+G
Sbjct: 24 PNTFRIYSMRFCPAAQRALIYASVKKIPSEVININLQQKPDWYFTKNYKGQVPTLEHAEG 83
Query: 182 KVLLTESNAIAYYVANDDL 238
K L+ ES I Y+ DD+
Sbjct: 84 KKLVIESAVIPEYL--DDI 100
>AL034489-6|CAA22468.1| 157|Caenorhabditis elegans Hypothetical
protein Y7A5A.8 protein.
Length = 157
Score = 30.7 bits (66), Expect = 0.86
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = -2
Query: 526 YSRIQHMLESMQQRAVDDNICKSNPLRDQESAAQKMSIQKL 404
+S QH+L+ +RA+ ++ ++QE+ AQK+ I+KL
Sbjct: 67 FSNQQHLLQDKPKRAMAQGEHGNDASKEQEAKAQKVEIKKL 107
>L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical
protein C02D5.3c protein.
Length = 254
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 116 KTENFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANDDL 238
K + F K G+VPA E +GK ++ ES I Y+ DD+
Sbjct: 62 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL--DDI 100
>L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical
protein C02D5.3a protein.
Length = 537
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 116 KTENFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANDDL 238
K + F K G+VPA E +GK ++ ES I Y+ DD+
Sbjct: 345 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL--DDI 383
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 28.7 bits (61), Expect = 3.5
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 17 YPENFRAYKALIAAQYSGANVKVAPDFVFGETNKTEN-FLKKFPAGKVPAFESADGKVLL 193
Y F Y + + N+ V + V +++ N +L K P G+VPA E +GKV +
Sbjct: 102 YSMRFCPYAQRVLIYLAKKNIPV--EVVNVNPDRSPNWYLPKSPIGRVPALE-INGKV-V 157
Query: 194 TESNAIAYYV 223
ESN I Y+
Sbjct: 158 WESNVIVEYL 167
>Z77135-2|CAB00879.1| 769|Caenorhabditis elegans Hypothetical
protein T16A9.4 protein.
Length = 769
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 503 QHVLDPTVRSKLVNVQRWFLTVGHQPQVSSVVREP 607
QHVL T + L N W L G P + REP
Sbjct: 371 QHVLQSTPKRVLANYISWRLVQGFSPFLPPSAREP 405
>AF014940-5|AAB63937.1| 203|Caenorhabditis elegans
Suppressor/enhancer of lin-12 protein9 protein.
Length = 203
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 34 RLQGVDRRTIFRGERESSPRF 96
++ G D + I++GERESS +F
Sbjct: 58 KITGPDNKEIYKGERESSGKF 78
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,751,384
Number of Sequences: 27780
Number of extensions: 355503
Number of successful extensions: 900
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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