Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_H16
         (614 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   1.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   4.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.2  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   9.6  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.6  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 161  LVLYPPGTSSRSFQSCWSHRI 99
            ++L  PGT    F+  W HR+
Sbjct: 968  MILVGPGTGIAPFRGFWHHRL 988


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 8    VYTYPENFRAYKALIAAQYSGANVKVA 88
            ++  PE+F A  ALI+ Q  G ++ VA
Sbjct: 1616 LFRKPEHFVASYALISNQCEGDSLNVA 1642


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = -2

Query: 514  QHMLESMQQRAVDDNICKSN 455
            Q + ESM+ +A+ D +C+++
Sbjct: 1317 QQIPESMRSKALIDQLCRNS 1336


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 553 LVPNGGSSAPGVQCCT*AC 609
           L+  GG    G+QC T  C
Sbjct: 374 LLKGGGGYLLGIQCLTVVC 392


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 285 EAHCNTRACVARSP 244
           E H    +C+ARSP
Sbjct: 73  EVHAQVYSCLARSP 86


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,918
Number of Sequences: 438
Number of extensions: 4205
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)