Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_H15
         (541 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   2.8  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   3.7  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    23   5.0  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 398 QRSRWHTRVRTRPSSLRRSARWCSQK*KKLAEAYL 502
           Q+  W T VR RPS   R  +   Q+ ++  E Y+
Sbjct: 231 QQQLWTTVVRGRPSQRHRQPQQQQQQQQQQGERYV 265


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 321  SDKTFGIKDGVIGVHRNLVLGCITDK 244
            +D    ++DG +G++R LV  CI  K
Sbjct: 1049 ADDLHQLEDGEVGIYRRLVGCCIGAK 1074


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 58  FND*LSIRYKRNKMAKAPAVGI 123
           FND L+  Y + K   AP VG+
Sbjct: 55  FNDVLNEAYAKGKAQSAPLVGL 76


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,050
Number of Sequences: 2352
Number of extensions: 12271
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)