Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_H15
         (541 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    24   1.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   1.5  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    23   2.6  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    23   2.6  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              22   3.5  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
 Frame = +1

Query: 388 GGKPK--IKVAYKGEDKTFFPEEVSSMVLTKMKETCRSLPRQ 507
           GG P     +  KG D   FP  ++      +K+ CR  P +
Sbjct: 567 GGDPMKTYNIILKGIDAIEFPRSITRNATALIKKLCRDNPAE 608


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 83  TKETKWQKHQQLVSIWAQPTLVWVCSS 163
           T+  K+ KH+    +W    LVW  S+
Sbjct: 289 TQPIKYAKHKNNRRVWLTILLVWAISA 315


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 425 RTRPSSLRRSARWCSQK*KKLAEAYLGKTVQN 520
           R  P +L      CS+K KK+A+  +   + N
Sbjct: 65  RNLPDALENECSPCSEKQKKIADKVVQFLIDN 96


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 425 RTRPSSLRRSARWCSQK*KKLAEAYLGKTVQN 520
           R  P +L      CS+K KK+A+  +   + N
Sbjct: 65  RNLPDALENECSPCSEKQKKIADKVVQFLIDN 96


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +2

Query: 134 QPTLVWVCSSMGKLRSSPMTRATELRPRTLRSPTLS 241
           QPTL  +CS  G    S     T   P T  + T+S
Sbjct: 74  QPTLRLLCSIAGGTSESQWEDVTGSTPLTFVNDTVS 109


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,073
Number of Sequences: 438
Number of extensions: 2901
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)