Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_H14
         (541 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        26   0.24 
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   3.0  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   3.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   5.2  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   9.2  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   9.2  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 25.8 bits (54), Expect = 0.24
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -2

Query: 399 PVSSLALLFEPPVGSHSTSPAIVVV-TFSTSPCPRFSL 289
           P S +  L+  PV  HSTSP + +    + +P P  S+
Sbjct: 315 PTSVMTELYPSPVPGHSTSPNLPLTHNIAHNPYPSHSI 352


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 14/57 (24%), Positives = 22/57 (38%)
 Frame = +2

Query: 206 GSIGMAIVYGLKVNLSVAMVGMLNHTAIKLNLGHGDVENVTTTIAGDVECEPTGGSN 376
           G +   I Y L  +L   +        I  N  +G     T T+ GD   + + G+N
Sbjct: 419 GFVAFTIGYDLNQHLQTGLPAGSYCDVISGNAENGSCSGKTITVGGDGYADISLGAN 475


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 14/57 (24%), Positives = 22/57 (38%)
 Frame = +2

Query: 206 GSIGMAIVYGLKVNLSVAMVGMLNHTAIKLNLGHGDVENVTTTIAGDVECEPTGGSN 376
           G +   I Y L  +L   +        I  N  +G     T T+ GD   + + G+N
Sbjct: 420 GFVAFTIGYDLNQHLQTGLPAGSYCDVISGNAENGSCSGKTITVGGDGYADISLGAN 476


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 378 LFEPPVGSHSTSPAIVVVTFSTSPCPRFSLIAVWFN 271
           L EP VG+ + +    +V+ STS      L A+ FN
Sbjct: 282 LLEPAVGTMTGAGGTAIVSISTSVSTSVYL-AIVFN 316


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 13/57 (22%), Positives = 21/57 (36%)
 Frame = +2

Query: 206 GSIGMAIVYGLKVNLSVAMVGMLNHTAIKLNLGHGDVENVTTTIAGDVECEPTGGSN 376
           G +   I Y L  +    +        I  N  +G     T T+ GD   + + G+N
Sbjct: 420 GFVAFTIGYDLNQHFETGLPAGSYCDVISGNAENGSCSGKTITVGGDGYADISLGAN 476


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 509 SQYIILPLEHLVF 471
           S Y + P+EHL+F
Sbjct: 187 SVYKVFPVEHLLF 199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,233
Number of Sequences: 336
Number of extensions: 2983
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)