Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_H12
         (486 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X56465-1|CAA39837.2|  698|Homo sapiens zinc finger transcription...    29   8.7  
BC067294-1|AAH67294.1|  761|Homo sapiens zinc finger protein 711...    29   8.7  

>X56465-1|CAA39837.2|  698|Homo sapiens zinc finger transcription
           factor protein.
          Length = 698

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 387 NNEVNLDNKLEKHKLKVRINRRHDYEIYLLAY 292
           N +V+  N LE HKL  ++++ H++  Y   Y
Sbjct: 361 NKKVSFHNHLESHKLINKVDKTHEFTEYTRRY 392


>BC067294-1|AAH67294.1|  761|Homo sapiens zinc finger protein 711
           protein.
          Length = 761

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 387 NNEVNLDNKLEKHKLKVRINRRHDYEIYLLAY 292
           N +V+  N LE HKL  ++++ H++  Y   Y
Sbjct: 424 NKKVSFHNHLESHKLINKVDKTHEFTEYTRRY 455


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,781,329
Number of Sequences: 237096
Number of extensions: 683380
Number of successful extensions: 980
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4384610846
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)