Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_H09
         (306 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   2.6  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    22   6.0  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    22   6.0  
DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.        21   7.9  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       21   7.9  

>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 146 IPSYISKE*PPLVLIVDYVMLEQS 217
           +P YI    PP+  + DYV+ E S
Sbjct: 95  LPDYIFFRMPPIYYLFDYVVNEFS 118



 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = +1

Query: 145 YPIIH-KQRITTPSLNC*LCNAGTIT*TRGR 234
           Y I H  Q+ T   + C LC+ G  +  RGR
Sbjct: 440 YAIGHWLQKATEHVIGCVLCSPGCFSLFRGR 470


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -1

Query: 282 FELHRPTLGSLSSTSIAPTCLSDCSSIT 199
           +E  R ++   ++TSI+ +CL  C  I+
Sbjct: 404 YEQIRSSIAFTANTSISCSCLPGCFEIS 431


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -1

Query: 282 FELHRPTLGSLSSTSIAPTCLSDCSSIT 199
           +E  R ++   ++TSI+ +CL  C  I+
Sbjct: 404 YEQIRSSIAFTANTSISCSCLPGCFEIS 431


>DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.
          Length = 482

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 106 PVYLGAILDCHILVLVFSLLTCSMYIIL 23
           P Y    L   I+   +   T SMYI+L
Sbjct: 302 PYYSSPELQARIMAFPYRNRTTSMYIVL 329


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 119 YCDVSRSPPIPSYISKE 169
           YCD S  PP+  +   E
Sbjct: 81  YCDTSACPPLIEFCDAE 97


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 341,577
Number of Sequences: 2352
Number of extensions: 6835
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19992474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)