Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_H09
(306 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 25 0.16
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 23 1.1
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 23 1.1
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 2.6
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 2.6
DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein. 21 4.5
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 20 7.9
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 20 7.9
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 20 7.9
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 20 7.9
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 20 7.9
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 20 7.9
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 20 7.9
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 20 7.9
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 20 7.9
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 25.4 bits (53), Expect = 0.16
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 110 YSRISWRDFGLSYFGP 63
Y R SWRD LS+ GP
Sbjct: 88 YFRQSWRDSRLSFLGP 103
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.6 bits (46), Expect = 1.1
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 89 RAKIYGSISKYCDVS 133
R KIYG++ YC V+
Sbjct: 359 REKIYGALEGYCRVA 373
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.6 bits (46), Expect = 1.1
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 89 RAKIYGSISKYCDVS 133
R KIYG++ YC V+
Sbjct: 359 REKIYGALEGYCRVA 373
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.4 bits (43), Expect = 2.6
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -3
Query: 151 WDRGRAAYVAIFTYTPVYLGAILDCHILVLVFSLLT 44
W G + + T LG + D H +L+ +LLT
Sbjct: 22 WQVGNEYTYLVRSRTLTSLGDLSDVHTGILIKALLT 57
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 2.6
Identities = 9/30 (30%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 65 DQNMTVQN-RAKIYGSISKYCDVSRSPPIP 151
D+++ V + A++ ++ CDV+ +PP P
Sbjct: 312 DKSLEVNHISARVGDNVEIKCDVTGTPPPP 341
>DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein.
Length = 132
Score = 20.6 bits (41), Expect = 4.5
Identities = 6/28 (21%), Positives = 18/28 (64%)
Frame = -2
Query: 176 VVILCLCMMG*GESGLRRNIYLYSRISW 93
++++ L + GE+ ++++ S++SW
Sbjct: 10 ILVITLIFLYFGEADIKKDCRKESKVSW 37
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 19.8 bits (39), Expect = 7.9
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 61 QGPKYDSPKSRQDIREYK*ILR 126
+GPK + PK IR ILR
Sbjct: 431 RGPKQNKPKVLHAIRRGASILR 452
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 7.9
Identities = 9/33 (27%), Positives = 15/33 (45%)
Frame = +2
Query: 59 NKDQNMTVQNRAKIYGSISKYCDVSRSPPIPSY 157
N + N N K+Y +I+ + P+P Y
Sbjct: 96 NYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIY 128
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 19.8 bits (39), Expect = 7.9
Identities = 9/33 (27%), Positives = 15/33 (45%)
Frame = +2
Query: 59 NKDQNMTVQNRAKIYGSISKYCDVSRSPPIPSY 157
N + N N K+Y +I+ + P+P Y
Sbjct: 96 NYNNNNNYNNYKKLYYNINYIEQIPIPVPVPIY 128
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 7.9
Identities = 9/33 (27%), Positives = 15/33 (45%)
Frame = +2
Query: 59 NKDQNMTVQNRAKIYGSISKYCDVSRSPPIPSY 157
N + N N K+Y +I+ + P+P Y
Sbjct: 96 NYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIY 128
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 7.9
Identities = 9/33 (27%), Positives = 15/33 (45%)
Frame = +2
Query: 59 NKDQNMTVQNRAKIYGSISKYCDVSRSPPIPSY 157
N + N N K+Y +I+ + P+P Y
Sbjct: 96 NYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIY 128
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 7.9
Identities = 9/33 (27%), Positives = 15/33 (45%)
Frame = +2
Query: 59 NKDQNMTVQNRAKIYGSISKYCDVSRSPPIPSY 157
N + N N K+Y +I+ + P+P Y
Sbjct: 96 NYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIY 128
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 7.9
Identities = 9/33 (27%), Positives = 15/33 (45%)
Frame = +2
Query: 59 NKDQNMTVQNRAKIYGSISKYCDVSRSPPIPSY 157
N + N N K+Y +I+ + P+P Y
Sbjct: 96 NYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIY 128
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 7.9
Identities = 9/33 (27%), Positives = 15/33 (45%)
Frame = +2
Query: 59 NKDQNMTVQNRAKIYGSISKYCDVSRSPPIPSY 157
N + N N K+Y +I+ + P+P Y
Sbjct: 96 NYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIY 128
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 7.9
Identities = 9/33 (27%), Positives = 15/33 (45%)
Frame = +2
Query: 59 NKDQNMTVQNRAKIYGSISKYCDVSRSPPIPSY 157
N + N N K+Y +I+ + P+P Y
Sbjct: 96 NYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIY 128
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,737
Number of Sequences: 438
Number of extensions: 1971
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 6493812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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