Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_H08
(434 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|R... 182 4e-45
UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110... 164 6e-40
UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4; Eukar... 160 1e-38
UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68; Euka... 149 3e-35
UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4; ... 148 6e-35
UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia ob... 139 3e-32
UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S riboso... 129 3e-29
UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=... 120 1e-26
UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkie... 119 3e-26
UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing prote... 118 7e-26
UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n... 114 7e-25
UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S riboso... 113 2e-24
UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6; T... 112 3e-24
UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2; ... 106 2e-22
UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillar... 102 4e-21
UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2; Apanspo... 98 6e-20
UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiell... 79 5e-14
UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin re... 69 4e-11
UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2; Thermoprot... 60 2e-08
UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n... 56 3e-07
UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10; Thermoprot... 56 3e-07
UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5; Crenar... 56 3e-07
UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 37 0.21
UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1; Meth... 36 0.28
UniRef50_Q28JV6 Cluster: Binding-protein-dependent transport sys... 34 1.1
UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:... 34 1.1
UniRef50_Q9BHL4 Cluster: Putative uncharacterized protein; n=3; ... 33 2.6
UniRef50_Q73K35 Cluster: GGDEF domain protein; n=1; Treponema de... 33 3.5
UniRef50_UPI0000E0E882 Cluster: hypothetical protein OM2255_2123... 32 4.6
UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011; ... 32 4.6
UniRef50_Q7QJ36 Cluster: ENSANGP00000016640; n=3; Culicidae|Rep:... 32 6.0
UniRef50_UPI00005A5A53 Cluster: PREDICTED: similar to aldehyde o... 31 8.0
UniRef50_A4QNR9 Cluster: Putative uncharacterized protein; n=1; ... 31 8.0
>UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|Rep:
Ribosomal protein S26 - Pectinaria gouldii (Trumpet
worm) (Ice-cream cone worm)
Length = 109
Score = 182 bits (442), Expect = 4e-45
Identities = 84/109 (77%), Positives = 93/109 (85%)
Frame = +3
Query: 18 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 197
MT+KRRN GR+K GRGH + VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EASVY
Sbjct: 1 MTKKRRNNGRSKKGRGHTRPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVYE 60
Query: 198 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMARP 344
+ LPKLYAKLHYCVSCAIHSKVVRNRS++ R+ RTPP P M +P
Sbjct: 61 GYPLPKLYAKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFKPGAMRKP 109
>UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110;
Fungi/Metazoa group|Rep: 40S ribosomal protein S26-like
1 - Homo sapiens (Human)
Length = 115
Score = 164 bits (399), Expect = 6e-40
Identities = 78/110 (70%), Positives = 88/110 (80%), Gaps = 1/110 (0%)
Frame = +3
Query: 18 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 197
MT+KRRN AK GRGHV+ +RCTNC RCVP DKAIKKFVIRNIVEAAAVRDI+E SV+
Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFD 60
Query: 198 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMA-RP 344
++ LPKLY KLHYCVSCAIHSKVVRNRS++ + RTPP P A RP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPPPRFRPAGAAPRP 110
>UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4;
Eukaryota|Rep: 40S ribosomal protein S26-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 160 bits (389), Expect = 1e-38
Identities = 69/98 (70%), Positives = 81/98 (82%)
Frame = +3
Query: 18 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 197
MT KRRNGGR KH RGHV +RC+NC +C PKDKAIK+F++RNIVE AA+RD+ EASVY
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 198 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 311
+ LPKLYAK YCVSCAIHS VVR RS+ +RR+RTPP
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPP 98
>UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68;
Eukaryota|Rep: 40S ribosomal protein S26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 119
Score = 149 bits (361), Expect = 3e-35
Identities = 65/99 (65%), Positives = 81/99 (81%)
Frame = +3
Query: 18 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 197
M +KR + GR K GRGHVK VRC NC++ +PKDKAIK+ IRNIVEAAAVRD++EASVY
Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYP 60
Query: 198 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK 314
+ LPK Y KLHYCVSCAIH+++VR RS++DR+ R PP+
Sbjct: 61 EYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQ 99
>UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S26 - Entamoeba histolytica HM-1:IMSS
Length = 147
Score = 148 bits (358), Expect = 6e-35
Identities = 66/99 (66%), Positives = 79/99 (79%)
Frame = +3
Query: 18 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 197
MT KRRN GR+K GRGH + VRC++C RCVPKDKAIK++ I+NIVEAAAVRDI++ S T
Sbjct: 1 MTSKRRNNGRSKKGRGHTQNVRCSHCGRCVPKDKAIKRYQIKNIVEAAAVRDISDNSALT 60
Query: 198 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK 314
++LPK Y KL YCVSC IH +VVR RS+ DRR R PPK
Sbjct: 61 KYKLPKTYMKLEYCVSCGIHGRVVRVRSRTDRRNRLPPK 99
>UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia
obliqua|Rep: Ribosomal protein S26e - Lonomia obliqua
(Moth)
Length = 82
Score = 139 bits (336), Expect = 3e-32
Identities = 63/72 (87%), Positives = 68/72 (94%)
Frame = +3
Query: 147 IVEAAAVRDINEASVYTSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFP 326
+++ +RDINEASVYTSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK+ FP
Sbjct: 11 LLKLLPLRDINEASVYTSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKNTFP 70
Query: 327 RDMARPQNVQRK 362
RDMARPQNVQRK
Sbjct: 71 RDMARPQNVQRK 82
>UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S ribosomal
protein S26-2, partial; n=4; Pan troglodytes|Rep:
PREDICTED: similar to 40S ribosomal protein S26-2,
partial - Pan troglodytes
Length = 196
Score = 129 bits (311), Expect = 3e-29
Identities = 64/107 (59%), Positives = 77/107 (71%), Gaps = 2/107 (1%)
Frame = +3
Query: 33 RNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYTSFQLP 212
RN RAK G H++ +RCTN A+ VPKDKAIKKF+IRN+VEAAAVRDI+EASV+ ++ LP
Sbjct: 1 RNNNRAKKGHSHMQRIRCTNYAQRVPKDKAIKKFIIRNVVEAAAVRDISEASVFNAYVLP 60
Query: 213 K--LYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMARPQ 347
K LY KL+YCV CAIH KVVRN K + +T P P A PQ
Sbjct: 61 KLYLYVKLNYCVRCAIHGKVVRNPPCKAHKDQTHPPRFRPSRSAAPQ 107
>UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=1;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S26,
putative - Trichomonas vaginalis G3
Length = 118
Score = 120 bits (290), Expect = 1e-26
Identities = 54/114 (47%), Positives = 74/114 (64%)
Frame = +3
Query: 18 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 197
M KRRN GR+K RGH + V C NC R VPKDKAI +F I+N+V+A++ +D+++A +Y
Sbjct: 1 MPVKRRNHGRSKMNRGHTRTVNCMNCGRQVPKDKAITRFAIKNMVDASSAKDVSDACIYQ 60
Query: 198 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMARPQNVQR 359
++LPK Y K +YCVSCA+H VVR R+ RR R P + +N QR
Sbjct: 61 GYELPKTYQKQYYCVSCAVHRHVVRPRNVNVRRNRVPLFLKLRLEKLEQRNAQR 114
>UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkiella
nova|Rep: 40S ribosomal protein S26 - Oxytricha nova
Length = 125
Score = 119 bits (286), Expect = 3e-26
Identities = 57/101 (56%), Positives = 70/101 (69%), Gaps = 2/101 (1%)
Frame = +3
Query: 18 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVY- 194
M KRRN GR K +GH VRCTNC R V KDKAIK+F RN+V+A++ RDI E Y
Sbjct: 1 MPSKRRNNGRNKKNKGHADTVRCTNCGRVVSKDKAIKRFQQRNMVDASSKRDIQENYAYA 60
Query: 195 -TSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK 314
+ F +PK+Y KL YCVSCAIH+++VR RS +DRR R K
Sbjct: 61 QSDFTMPKIYVKLSYCVSCAIHARIVRVRSVEDRRHRYTTK 101
>UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing protein;
n=12; Alveolata|Rep: Ribosomal protein S26e containing
protein - Tetrahymena thermophila SB210
Length = 197
Score = 118 bits (283), Expect = 7e-26
Identities = 53/103 (51%), Positives = 73/103 (70%), Gaps = 2/103 (1%)
Frame = +3
Query: 18 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 197
M KRRN GR++ RGH + V CTNC R V KDKA+K++ +R++V+ ++ RDI + +
Sbjct: 79 MPVKRRNAGRSQKNRGHTRTVPCTNCGRQVAKDKAVKRYTVRDMVDPSSKRDIQQKLAFE 138
Query: 198 SFQ--LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSN 320
+ + +PKLY KL YC+SCAIHS+VVR R +DRRIR PP N
Sbjct: 139 NEKQGIPKLYVKLQYCISCAIHSRVVRVRCAEDRRIRRPPIRN 181
>UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n=2;
Rattus norvegicus|Rep: UPI00001CB188 UniRef100 entry -
Rattus norvegicus
Length = 107
Score = 114 bits (275), Expect = 7e-25
Identities = 55/87 (63%), Positives = 68/87 (78%)
Frame = +3
Query: 48 AKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYTSFQLPKLYAK 227
AK G GHV+ V C + A C+PKDKAIK F+I+NI+EAAAVRDI++A+V+ ++ LP LY K
Sbjct: 12 AKKGCGHVQPVPCRSSAWCLPKDKAIK-FIIQNILEAAAVRDIDKANVFKAYMLPMLYVK 70
Query: 228 LHYCVSCAIHSKVVRNRSKKDRRIRTP 308
LHYCVSCAIHS+VVRN K RR P
Sbjct: 71 LHYCVSCAIHSEVVRNHLLKLRRTEHP 97
>UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S ribosomal
protein S26 isoform 3; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 40S ribosomal protein S26 isoform
3 - Canis familiaris
Length = 118
Score = 113 bits (271), Expect = 2e-24
Identities = 51/59 (86%), Positives = 56/59 (94%)
Frame = +3
Query: 18 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVY 194
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVF 59
>UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein s26, putative -
Leishmania major
Length = 112
Score = 112 bits (270), Expect = 3e-24
Identities = 55/106 (51%), Positives = 73/106 (68%), Gaps = 4/106 (3%)
Frame = +3
Query: 18 MTRKRRNGGRAK--HGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEAS- 188
MT KRRN GR+K H RG VK + C NC R PKDKA+ +FV+R +++AA+ RD+ EAS
Sbjct: 1 MTTKRRNHGRSKPAHSRGRVKPIHCFNCGRLTPKDKAVGRFVVRRMLDAASARDVAEASP 60
Query: 189 VY-TSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNF 323
VY +F +PKLY K +C++CAIHS+ VR R +R+IR K F
Sbjct: 61 VYGANFPMPKLYMKQRFCIACAIHSRTVRARPVGNRKIRYTKKVPF 106
>UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2;
Ostreococcus|Rep: Ribosomal protein S26, cytosolic -
Ostreococcus tauri
Length = 221
Score = 106 bits (254), Expect = 2e-22
Identities = 47/82 (57%), Positives = 64/82 (78%)
Frame = +3
Query: 69 VKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYTSFQLPKLYAKLHYCVSC 248
VK V C + VPKDKA+++F++RNIVE+AA+RD+ E+ + S+ LPKLY K++Y +S
Sbjct: 127 VKRVFCESSGALVPKDKAVRRFMVRNIVESAAIRDLQESCAFESYTLPKLYRKVYYSISA 186
Query: 249 AIHSKVVRNRSKKDRRIRTPPK 314
AIHSKVVR RS++ RRIR PPK
Sbjct: 187 AIHSKVVRVRSREARRIRDPPK 208
>UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillardia
theta|Rep: 40S ribosomal protein S26 - Guillardia theta
(Cryptomonas phi)
Length = 98
Score = 102 bits (244), Expect = 4e-21
Identities = 44/95 (46%), Positives = 68/95 (71%)
Frame = +3
Query: 18 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 197
MT+KRRN GR+K RG V+ + C + VPKDKAI ++VI+NIV+ +++RD+ ++ +Y
Sbjct: 1 MTKKRRNNGRSKKNRGLVRRIHCNLTGKLVPKDKAIVRYVIKNIVDLSSLRDLQDSCIYE 60
Query: 198 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIR 302
+ +PKLY K + + AIH+++VR RSK DR+ R
Sbjct: 61 YYTMPKLYYKNTFSIESAIHNRIVRVRSKADRKKR 95
>UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2;
Apansporoblastina|Rep: 40S RIBOSOMAL PROTEIN S26 -
Encephalitozoon cuniculi
Length = 105
Score = 98.3 bits (234), Expect = 6e-20
Identities = 41/91 (45%), Positives = 63/91 (69%)
Frame = +3
Query: 30 RRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYTSFQL 209
RRN GR K RG +++C C PKDKAIK+F I++++E A+ D+ +A++Y F++
Sbjct: 2 RRNHGRGKKNRGSAGSIQCDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQATIYDVFEV 61
Query: 210 PKLYAKLHYCVSCAIHSKVVRNRSKKDRRIR 302
P++ K +CVSCA H+K+VR RS + R+IR
Sbjct: 62 PRMGYKSQFCVSCACHAKIVRVRSSQARKIR 92
>UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiella
natans|Rep: Ribosomal protein S26 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 98
Score = 78.6 bits (185), Expect = 5e-14
Identities = 36/94 (38%), Positives = 55/94 (58%)
Frame = +3
Query: 18 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 197
M +KRRN GR+K+ RGHV + C + VP+DKAIKK ++++ ++D V
Sbjct: 1 MVKKRRNNGRSKNNRGHVNRIHCMSSNALVPRDKAIKKLNVKSLFFPNILKDTPNVFVLP 60
Query: 198 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRI 299
++ PKLY+ + Y +S A K ++ KK RRI
Sbjct: 61 GYKAPKLYSYVFYSISSAFSQKFIKPGRKKYRRI 94
>UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin
repeat domain protein 11 (Ankyrin repeat-containing
cofactor 1); n=1; Rattus norvegicus|Rep: PREDICTED:
similar to Ankyrin repeat domain protein 11 (Ankyrin
repeat-containing cofactor 1) - Rattus norvegicus
Length = 682
Score = 68.9 bits (161), Expect = 4e-11
Identities = 34/57 (59%), Positives = 41/57 (71%)
Frame = +3
Query: 60 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYTSFQLPKLYAKL 230
R +V+ + NC + +PKDKA KKFV RNIVEAAAVRDI EA+V + LPK Y KL
Sbjct: 34 RSYVRPIGYMNCVQYMPKDKASKKFVTRNIVEAAAVRDIAEANVLDANVLPKFYIKL 90
>UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2;
Thermoprotei|Rep: Ribosomal protein S26E - Caldivirga
maquilingensis IC-167
Length = 152
Score = 60.5 bits (140), Expect = 2e-08
Identities = 27/95 (28%), Positives = 52/95 (54%)
Frame = +3
Query: 24 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYTSF 203
+KR+N GR K +G V C NC + +P+ KA++ V + + +++ +
Sbjct: 7 KKRKNRGRHKGDKGKESIVYCDNCGKMIPRSKAVRVTVPYSPIPTDLAKELEKQGAI--- 63
Query: 204 QLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 308
+P+ Y YCV+CAI+ +++ RS+ +R+ + P
Sbjct: 64 -VPRYYITKTYCVNCAIYLGIIKVRSEDERKSKKP 97
>UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC1C52 UniRef100 entry -
Rattus norvegicus
Length = 70
Score = 56.0 bits (129), Expect = 3e-07
Identities = 40/84 (47%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Frame = +3
Query: 24 RKRRNGGRAKHGR--GHVKAVRCT-NCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVY 194
R RR+ G+ K GR G + V+ N C+ KDKA KFVI+NIVEAAA+R
Sbjct: 3 RMRRDEGKGKKGRSQGLLWPVKAAANFTGCMTKDKA-NKFVIQNIVEAAAIR-------- 53
Query: 195 TSFQLPKLYAKLHYCVSCAIHSKV 266
Y KLH CVSCAIH KV
Sbjct: 54 -------FYVKLHCCVSCAIHIKV 70
>UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10;
Thermoprotei|Rep: Ribosomal protein S26 - Pyrobaculum
aerophilum
Length = 98
Score = 56.0 bits (129), Expect = 3e-07
Identities = 26/97 (26%), Positives = 51/97 (52%)
Frame = +3
Query: 18 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 197
M +KR+N GR K +G + C NC + +P+ KA++ V + V R++ +
Sbjct: 1 MPKKRKNRGRKKGDKGREPYLHCDNCGKIMPRSKAVRVTVPYSPVPPDLARELEKQGAII 60
Query: 198 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 308
S + YC++CA+ +++ RS+++R+ + P
Sbjct: 61 S----RYLVTKTYCINCAVFFGIIKVRSREERKKKIP 93
>UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5;
Crenarchaeota|Rep: 30S ribosomal protein S26e -
Aeropyrum pernix
Length = 95
Score = 56.0 bits (129), Expect = 3e-07
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = +3
Query: 18 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI-NEASVY 194
M +KR + GR K +G V+C NC R VP DKAI + + V+ ++ + ++
Sbjct: 1 MPKKRESRGRRKGAKGKAGTVQCDNCGRVVPADKAICVTRMYSPVDPQLAEELEKKGAII 60
Query: 195 TSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRR 296
+ + K YCVSCA+H +V+ R ++ R+
Sbjct: 61 MRYPVTKC-----YCVSCAVHYGIVKIRPEEQRK 89
>UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 157
Score = 36.7 bits (81), Expect = 0.21
Identities = 23/78 (29%), Positives = 39/78 (50%)
Frame = -1
Query: 302 TDPPVLLRSVTHHFAMDRA*HAVVEFCIQLGKLE*SIY*GFVYVPHSGSFNNIPDHKLFD 123
+D V S +++ ++D A + VV+ + L K S+ GF + S SFN++ D D
Sbjct: 35 SDSSVSSGSDSNNSSVDSARNTVVQLVVGLWKSIFSVDRGFRQISDSSSFNDVSDSHSLD 94
Query: 122 GFVFGHAASAVGAPDGLN 69
G V + + V D L+
Sbjct: 95 GLVLWNRSGTVDTSDRLD 112
>UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1;
Methanopyrus kandleri|Rep: Zn-ribbon containing protein
- Methanopyrus kandleri
Length = 87
Score = 36.3 bits (80), Expect = 0.28
Identities = 24/80 (30%), Positives = 35/80 (43%)
Frame = +3
Query: 12 RNMTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASV 191
RN RK R+G + RG V C C VP+ KAI I + + +++ V
Sbjct: 3 RNPRRKGRDGWKQSKSRGKPSFVTCECCGGKVPRHKAIPWTQGFRITDPVVRQAVDDRYV 62
Query: 192 YTSFQLPKLYAKLHYCVSCA 251
+T K++YC CA
Sbjct: 63 HT------FSRKVYYCPKCA 76
>UniRef50_Q28JV6 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=2;
Rhodobacteraceae|Rep: Binding-protein-dependent
transport systems inner membrane component - Jannaschia
sp. (strain CCS1)
Length = 293
Score = 34.3 bits (75), Expect = 1.1
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -2
Query: 256 WIAHDTQ*WSFAYSLGSWNEVYTEASFMSLTAAASTIFLI 137
W+ + W+F Y WN VY A + +T +T+F +
Sbjct: 48 WLGFENYTWAFLYEPPFWNSVYVTALYTVVTVVLTTLFAL 87
>UniRef50_Q74N49 Cluster: NEQ043; n=1; Nanoarchaeum equitans|Rep:
NEQ043 - Nanoarchaeum equitans
Length = 84
Score = 34.3 bits (75), Expect = 1.1
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +3
Query: 72 KAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYTSFQLPKLYAKLHYCVSCA 251
K VRC C R +PK+KA + N+ +++E V F + K++ C SCA
Sbjct: 11 KTVRCYYCGRILPKEKAYVIYTKPNV-----AGELSENEVIAVFSQKR---KIYVCPSCA 62
Query: 252 IHSKVVRNRSK 284
H + +R +
Sbjct: 63 RHRGIKDHRKE 73
>UniRef50_Q9BHL4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 430
Score = 33.1 bits (72), Expect = 2.6
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +3
Query: 66 HVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYTSFQL-PKLYAKLHYCV 242
H+K ++C NC+ +K+++ +IR+ E A ++ +A +L P K H
Sbjct: 198 HLKEIQCDNCSLVFQSEKSLQSHIIRHHQEDADELEVWKAPCSICKELFPSTSVKTHEWY 257
Query: 243 SCAIHSKVV-RNRSKKDRRIRTPPKS 317
C K++ + R K ++++ P S
Sbjct: 258 -CKNREKIIEKQRVSKILKVQSLPSS 282
>UniRef50_Q73K35 Cluster: GGDEF domain protein; n=1; Treponema
denticola|Rep: GGDEF domain protein - Treponema
denticola
Length = 1431
Score = 32.7 bits (71), Expect = 3.5
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 117 KAIKKFVIRNIVEAAAVRDINEASVYTSFQLPKLYAKLHYCVSCAIHSKVV-RNRSKK 287
K I K + +NI++ + NE S+ LY +L Y +H K++ R ++KK
Sbjct: 278 KYIPKLLEQNIIKKTTKQHANEYSIINKILQKTLYDELDYAYRLEVHKKIIQRIKTKK 335
>UniRef50_UPI0000E0E882 Cluster: hypothetical protein OM2255_21238;
n=1; alpha proteobacterium HTCC2255|Rep: hypothetical
protein OM2255_21238 - alpha proteobacterium HTCC2255
Length = 524
Score = 32.3 bits (70), Expect = 4.6
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 274 TDLRRTGGSVHHPRATSQGIWRVHRMYRGSREF 372
T+ RT V+ P + + +WR+ R+YR S EF
Sbjct: 36 TETTRTSNVVYGPVSDNDTLWRIARIYRNSPEF 68
>UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 53.t00011 - Entamoeba histolytica HM-1:IMSS
Length = 586
Score = 32.3 bits (70), Expect = 4.6
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +3
Query: 81 RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYTSFQLPKLYAK 227
R N ++C+PKDK++ ++V N ++ +RDI +VY+ + KL K
Sbjct: 170 RGINESKCIPKDKSLNEYVENNPIK-FTIRDI--VTVYSISDIKKLMMK 215
>UniRef50_Q7QJ36 Cluster: ENSANGP00000016640; n=3; Culicidae|Rep:
ENSANGP00000016640 - Anopheles gambiae str. PEST
Length = 123
Score = 31.9 bits (69), Expect = 6.0
Identities = 23/74 (31%), Positives = 36/74 (48%)
Frame = +3
Query: 81 RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYTSFQLPKLYAKLHYCVSCAIHS 260
R A +P+ + + V+R + A RDIN+A YTS K KL Y +S I S
Sbjct: 49 RSRGVASEIPRPQTWAERVLRT--QKTATRDINDAYNYTSISHKKDDKKLMYTLSNQIKS 106
Query: 261 KVVRNRSKKDRRIR 302
+++ +R+ R
Sbjct: 107 YNCHSKAYTNRKYR 120
>UniRef50_UPI00005A5A53 Cluster: PREDICTED: similar to aldehyde
oxidase 1; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to aldehyde oxidase 1 - Canis familiaris
Length = 1053
Score = 31.5 bits (68), Expect = 8.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 359 PLYILWTRHIPWEVALGWCTD 297
P Y L+TRH+PW+V C D
Sbjct: 1014 PEYFLYTRHVPWQVLGANCAD 1034
>UniRef50_A4QNR9 Cluster: Putative uncharacterized protein; n=1;
Danio rerio|Rep: Putative uncharacterized protein -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 1361
Score = 31.5 bits (68), Expect = 8.0
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +2
Query: 80 PVHQLRSLRAQRQSHQKVCDQEYC*SCRCEGHKRSLSIYFIPTSQAVC 223
PV +LRS R QR++ + E S R GH S S P QAVC
Sbjct: 315 PVEKLRSPRRQRRASRSCHAPERPYSPRNAGHASSCSPVMKPLPQAVC 362
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 375,203,233
Number of Sequences: 1657284
Number of extensions: 6895930
Number of successful extensions: 22931
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 22284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22907
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21496989549
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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