Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_H08
(434 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26 pro... 177 1e-44
BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26 p... 177 1e-44
BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26 p... 177 1e-44
BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26 p... 177 1e-44
BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26 p... 177 1e-44
BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26 p... 177 1e-44
X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26 pro... 177 1e-44
X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26 pro... 176 3e-44
AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl... 175 4e-44
AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein. 167 2e-41
AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-l... 164 1e-40
AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26 p... 69 9e-12
AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26 p... 42 7e-04
X79236-1|CAA55818.1| 20|Homo sapiens ribosomal protein S26 pro... 37 0.026
BC039248-1|AAH39248.1| 928|Homo sapiens regulatory factor X dom... 30 3.0
AL355272-1|CAI23444.2| 928|Homo sapiens Regulatory factor X dom... 30 3.0
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 29 5.2
U12767-1|AAB02581.1| 587|Homo sapiens mitogen induced nuclear o... 29 5.2
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 29 5.2
D85242-1|BAA31221.1| 143|Homo sapiens NOR-1 3'-variant protein. 29 5.2
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 29 5.2
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 29 5.2
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 29 5.2
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 29 5.2
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 29 5.2
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 29 5.2
>U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 177 bits (432), Expect = 1e-44
Identities = 84/110 (76%), Positives = 94/110 (85%), Gaps = 1/110 (0%)
Frame = +3
Query: 18 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 197
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 198 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMA-RP 344
++ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP P A RP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPRP 110
>BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 177 bits (432), Expect = 1e-44
Identities = 84/110 (76%), Positives = 94/110 (85%), Gaps = 1/110 (0%)
Frame = +3
Query: 18 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 197
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 198 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMA-RP 344
++ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP P A RP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPRP 110
>BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 177 bits (432), Expect = 1e-44
Identities = 84/110 (76%), Positives = 94/110 (85%), Gaps = 1/110 (0%)
Frame = +3
Query: 18 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 197
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 198 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMA-RP 344
++ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP P A RP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPRP 110
>BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 177 bits (432), Expect = 1e-44
Identities = 84/110 (76%), Positives = 94/110 (85%), Gaps = 1/110 (0%)
Frame = +3
Query: 18 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 197
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 198 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMA-RP 344
++ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP P A RP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPRP 110
>BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 177 bits (432), Expect = 1e-44
Identities = 84/110 (76%), Positives = 94/110 (85%), Gaps = 1/110 (0%)
Frame = +3
Query: 18 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 197
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 198 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMA-RP 344
++ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP P A RP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPRP 110
>BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 177 bits (432), Expect = 1e-44
Identities = 84/110 (76%), Positives = 94/110 (85%), Gaps = 1/110 (0%)
Frame = +3
Query: 18 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 197
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 198 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMA-RP 344
++ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP P A RP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPRP 110
>X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 177 bits (431), Expect = 1e-44
Identities = 80/98 (81%), Positives = 90/98 (91%)
Frame = +3
Query: 18 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 197
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 198 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 311
++ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 176 bits (428), Expect = 3e-44
Identities = 83/110 (75%), Positives = 93/110 (84%), Gaps = 1/110 (0%)
Frame = +3
Query: 18 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 197
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+EASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 198 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMA-RP 344
++ LPKLY KLHYCVSC IHSKVVRNRS++ R+ RTPP P A RP
Sbjct: 61 AYVLPKLYVKLHYCVSCVIHSKVVRNRSREARKDRTPPPRFRPAGAAPRP 110
>AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl
Coenzyme A ).).
Length = 115
Score = 175 bits (427), Expect = 4e-44
Identities = 83/110 (75%), Positives = 93/110 (84%), Gaps = 1/110 (0%)
Frame = +3
Query: 18 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 197
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKD AIKKFVIRNIVEAAAVRDI+EASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 198 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMA-RP 344
++ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP P A RP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPRP 110
>AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein.
Length = 115
Score = 167 bits (405), Expect = 2e-41
Identities = 80/110 (72%), Positives = 90/110 (81%), Gaps = 1/110 (0%)
Frame = +3
Query: 18 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 197
MT+KRRN RAK GRGHV+ +RCTNCARCVPKD AIKKFVIRNIVEAAAVRDI+EASV+
Sbjct: 1 MTKKRRNNVRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 198 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRD-MARP 344
++ LPKL KLHYCVSC IHSKVVRNRS++ R+ RTPP P ARP
Sbjct: 61 AYVLPKLCVKLHYCVSCVIHSKVVRNRSREARKDRTPPPRFRPAGAAARP 110
>AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-like
1 protein.
Length = 115
Score = 164 bits (399), Expect = 1e-40
Identities = 78/110 (70%), Positives = 88/110 (80%), Gaps = 1/110 (0%)
Frame = +3
Query: 18 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINEASVYT 197
MT+KRRN AK GRGHV+ +RCTNC RCVP DKAIKKFVIRNIVEAAAVRDI+E SV+
Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFD 60
Query: 198 SFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMA-RP 344
++ LPKLY KLHYCVSCAIHSKVVRNRS++ + RTPP P A RP
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPPPRFRPAGAAPRP 110
>AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26
protein.
Length = 45
Score = 68.5 bits (160), Expect = 9e-12
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +3
Query: 201 FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 311
+ LPKLY KLHYCVSCAIHSKVVRNRS++ R+ RTPP
Sbjct: 1 YVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 37
>AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26
protein.
Length = 23
Score = 42.3 bits (95), Expect = 7e-04
Identities = 20/22 (90%), Positives = 22/22 (100%)
Frame = +3
Query: 129 KFVIRNIVEAAAVRDINEASVY 194
KFVIRNIVEAAAVRDI+EASV+
Sbjct: 1 KFVIRNIVEAAAVRDISEASVF 22
>X79236-1|CAA55818.1| 20|Homo sapiens ribosomal protein S26
protein.
Length = 20
Score = 37.1 bits (82), Expect = 0.026
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +3
Query: 18 MTRKRRNGGRAKHGRGHVK 74
MT+KRRN GRAK GRGHV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQ 19
>BC039248-1|AAH39248.1| 928|Homo sapiens regulatory factor X domain
containing 1 protein.
Length = 928
Score = 30.3 bits (65), Expect = 3.0
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 170 GHKRSLSIYFIPTSQAVCKTPLL-RVMRDP*QSGA*QI*EGQADPYTTQEQLPKGYGAST 346
G K++ S Y +S C+TP+L ++ P S + Q G ++ Y QE L +G S+
Sbjct: 848 GRKQTSSFYTDTSSPVACRTPVLASSLQTPIPSSSSQCMYGTSNQYPAQETL-DSHGTSS 906
Query: 347 ECTEEVGSL 373
E V SL
Sbjct: 907 R--EMVSSL 913
>AL355272-1|CAI23444.2| 928|Homo sapiens Regulatory factor X domain
containing 1 protein.
Length = 928
Score = 30.3 bits (65), Expect = 3.0
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 170 GHKRSLSIYFIPTSQAVCKTPLL-RVMRDP*QSGA*QI*EGQADPYTTQEQLPKGYGAST 346
G K++ S Y +S C+TP+L ++ P S + Q G ++ Y QE L +G S+
Sbjct: 848 GRKQTSSFYTDTSSPVACRTPVLASSLQTPIPSSSSQCMYGTSNQYPAQETL-DSHGTSS 906
Query: 347 ECTEEVGSL 373
E V SL
Sbjct: 907 R--EMVSSL 913
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 219 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMARP 344
Y + C+S + +VVR S K RR R P PKS ++ ++P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>U12767-1|AAB02581.1| 587|Homo sapiens mitogen induced nuclear
orphan receptor protein.
Length = 587
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 219 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMARP 344
Y + C+S + +VVR S K RR R P PKS ++ ++P
Sbjct: 307 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 350
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 219 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMARP 344
Y + C+S + +VVR S K RR R P PKS ++ ++P
Sbjct: 404 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 447
>D85242-1|BAA31221.1| 143|Homo sapiens NOR-1 3'-variant protein.
Length = 143
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 219 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMARP 344
Y + C+S + +VVR S K RR R P PKS ++ ++P
Sbjct: 46 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 89
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 219 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMARP 344
Y + C+S + +VVR S K RR R P PKS ++ ++P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 219 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMARP 344
Y + C+S + +VVR S K RR R P PKS ++ ++P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 219 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMARP 344
Y + C+S + +VVR S K RR R P PKS ++ ++P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 219 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMARP 344
Y + C+S + +VVR S K RR R P PKS ++ ++P
Sbjct: 357 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 400
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 219 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMARP 344
Y + C+S + +VVR S K RR R P PKS ++ ++P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 219 YAKLHYCVSCAIHSKVVRNRSKKDRRIRTP--PKSNFPRDMARP 344
Y + C+S + +VVR S K RR R P PKS ++ ++P
Sbjct: 357 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 400
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,832,381
Number of Sequences: 237096
Number of extensions: 1070187
Number of successful extensions: 14443
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 10560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14438
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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