Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_H06
         (441 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    24   0.56 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    24   0.56 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   5.2  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   5.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   6.9  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    20   9.1  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = -1

Query: 297 DGRPWSRSAASCRSIWRNAVASAPVAPGPRSLHSHNSNIASVG 169
           + R W R+AA+   +W N   S  V    R  + H   + + G
Sbjct: 534 ESRVWPRAAAAAERLWTN--PSDYVKQTERRFYRHRERLVARG 574


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +2

Query: 20  GESPFKLSGRIKRQLCSILDPPNARGNDWRALASRLGVD 136
           G+  + L G ++ +L  I    NA+  DW+ +A  +  D
Sbjct: 441 GQVKYPLIGAMREELRGISRGKNAKDVDWQKIAGAVEED 479


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 291 RPWSRSAASCRSIWRNAVA 235
           R W RSAA    IW +  A
Sbjct: 525 RIWPRSAAFAERIWSDPSA 543


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 113 LASRLGVDRYMTWFATKSSPT 175
           L   + VD +MT F+ ++ PT
Sbjct: 177 LREEIKVDPFMTGFSHRNQPT 197


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 297 DGRPWSRSAASCRSIW 250
           D R W R+AA    +W
Sbjct: 565 DTRLWPRAAAFAERVW 580


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = -1

Query: 138 RSTPSLDASARQSLPRAFGGSSIEHNCRFIRPLNLNGLSPGTLASC 1
           R TPS DAS+++          +E    F   + L+ L    +A+C
Sbjct: 108 RLTPSKDASSKRIXTAFTSTQLLELEREFASNMYLSRLRRIEIATC 153


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,750
Number of Sequences: 336
Number of extensions: 1742
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9880622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)