Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_H06
(441 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein. 60 9e-10
S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein. 60 9e-10
AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated... 60 9e-10
AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associa... 32 0.16
AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap (death-as... 32 0.16
U40800-4|AAO91742.1| 763|Caenorhabditis elegans Hypothetical pr... 29 2.0
U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical pr... 27 6.0
>S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein.
Length = 919
Score = 59.7 bits (138), Expect = 9e-10
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Frame = +2
Query: 32 FKLSGRIKRQLCSILDPPNARGNDWRALASRLGVDRYMTWFAT--KSSPTEAILELWECR 205
F+L +K +L +LD PN +DWR LA +L DRY+ +FA+ SPT +L+LWE
Sbjct: 820 FRLPFGVKDELARLLDMPNESHSDWRGLAKKLHYDRYLQFFASFPDCSPTSLLLDLWEAS 879
Query: 206 ERGPXXXX-XXXXXXRQMDRHDAADLLQ 286
G R M R DA +L+
Sbjct: 880 SSGSARAVPDLLQTLRVMGRPDAVMVLE 907
>S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein.
Length = 947
Score = 59.7 bits (138), Expect = 9e-10
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Frame = +2
Query: 32 FKLSGRIKRQLCSILDPPNARGNDWRALASRLGVDRYMTWFAT--KSSPTEAILELWECR 205
F+L +K +L +LD PN +DWR LA +L DRY+ +FA+ SPT +L+LWE
Sbjct: 848 FRLPFGVKDELARLLDMPNESHSDWRGLAKKLHYDRYLQFFASFPDCSPTSLLLDLWEAS 907
Query: 206 ERGPXXXX-XXXXXXRQMDRHDAADLLQ 286
G R M R DA +L+
Sbjct: 908 SSGSARAVPDLLQTLRVMGRPDAVMVLE 935
>AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated
protein 5, isoform a protein.
Length = 919
Score = 59.7 bits (138), Expect = 9e-10
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Frame = +2
Query: 32 FKLSGRIKRQLCSILDPPNARGNDWRALASRLGVDRYMTWFAT--KSSPTEAILELWECR 205
F+L +K +L +LD PN +DWR LA +L DRY+ +FA+ SPT +L+LWE
Sbjct: 820 FRLPFGVKDELARLLDMPNESHSDWRGLAKKLHYDRYLQFFASFPDCSPTSLLLDLWEAS 879
Query: 206 ERGPXXXX-XXXXXXRQMDRHDAADLLQ 286
G R M R DA +L+
Sbjct: 880 SSGSARAVPDLLQTLRVMGRPDAVMVLE 907
>AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associated
protein kinase protein.
Length = 1425
Score = 32.3 bits (70), Expect = 0.16
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +2
Query: 59 QLCSILDPPNARGNDWRALASRLGV-DRYMTWFAT--KSSPTEAILELWECRERGPXXXX 229
+L +LDPP+A G DW LA +L + D+ +T S T+ +L W
Sbjct: 1308 ELACLLDPPHAMGRDWSILAVKLQLTDQVPDVDSTGQSLSRTDQLLNEWAIHHPEQASVG 1367
Query: 230 XXXXXXRQMDRHDAADLL 283
++ R DA D L
Sbjct: 1368 NLCRILVELGRCDARDAL 1385
>AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap
(death-associated protein)kinase homolog protein 1
protein.
Length = 1425
Score = 32.3 bits (70), Expect = 0.16
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +2
Query: 59 QLCSILDPPNARGNDWRALASRLGV-DRYMTWFAT--KSSPTEAILELWECRERGPXXXX 229
+L +LDPP+A G DW LA +L + D+ +T S T+ +L W
Sbjct: 1308 ELACLLDPPHAMGRDWSILAVKLQLTDQVPDVDSTGQSLSRTDQLLNEWAIHHPEQASVG 1367
Query: 230 XXXXXXRQMDRHDAADLL 283
++ R DA D L
Sbjct: 1368 NLCRILVELGRCDARDAL 1385
>U40800-4|AAO91742.1| 763|Caenorhabditis elegans Hypothetical
protein D2096.12 protein.
Length = 763
Score = 28.7 bits (61), Expect = 2.0
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = -1
Query: 237 ASAPVAPGPRSLH-SHNSNIASVG----ELFVANQVIYRSTPSLDASARQSLP 94
+ AP +P + H S NS + + + VAN R+TP D S+R S P
Sbjct: 165 SQAPASPNSLARHRSANSGLRNAAIHTPSMRVANMFATRTTPPFDTSSRPSTP 217
>U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical
protein T04G9.1 protein.
Length = 1610
Score = 27.9 bits (59), Expect = 3.5
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -1
Query: 267 SCRSIWRNAVASAPVAPGPRSLHSHNSN 184
+CRS W+N+ P+ P ++H + N
Sbjct: 256 NCRSHWKNSRGHQPIRPAQPNIHPMSQN 283
>Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical
protein M18.1 protein.
Length = 337
Score = 27.1 bits (57), Expect = 6.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 300 HDGRPWSRSAASCRSIWRNAVASAPVAPGP 211
+DGRP + A RS+ R A +P GP
Sbjct: 193 NDGRPGAPGAPGTRSVGRPGTAGSPGPQGP 222
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,224,151
Number of Sequences: 27780
Number of extensions: 172004
Number of successful extensions: 499
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 496
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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