Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_H04
(478 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosom... 130 7e-31
AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p pro... 130 7e-31
AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA ... 130 7e-31
Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein ( Dros... 124 6e-29
EF460788-1|ABQ10624.1| 1840|Drosophila melanogaster neurexin pro... 29 3.3
BT023898-1|ABA81832.1| 1840|Drosophila melanogaster LP14275p pro... 29 3.3
AY069731-1|AAL39876.1| 934|Drosophila melanogaster LP03809p pro... 29 3.3
AE014297-3164|AAF56006.1| 1837|Drosophila melanogaster CG7050-PA... 29 3.3
AY061562-1|AAL29110.1| 249|Drosophila melanogaster LP11415p pro... 29 4.3
AE014298-1718|AAF48118.1| 249|Drosophila melanogaster CG2471-PA... 29 4.3
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 28 7.5
U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl... 27 9.9
>S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosomal
protein rpA2 protein.
Length = 112
Score = 130 bits (315), Expect = 7e-31
Identities = 69/112 (61%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
Frame = +3
Query: 72 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
M++KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 252 TNIGSGV-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 404
TNIGSGV DDDMGFGLFD
Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p
protein.
Length = 112
Score = 130 bits (315), Expect = 7e-31
Identities = 69/112 (61%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
Frame = +3
Query: 72 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
M++KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 252 TNIGSGV-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 404
TNIGSGV DDDMGFGLFD
Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA
protein.
Length = 112
Score = 130 bits (315), Expect = 7e-31
Identities = 69/112 (61%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
Frame = +3
Query: 72 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
M++KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 252 TNIGSGV-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 404
TNIGSGV DDDMGFGLFD
Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein (
Drosophila melanogastermRNA for A-type ribosomal protein
rp21C. ).
Length = 112
Score = 124 bits (299), Expect = 6e-29
Identities = 67/112 (59%), Positives = 74/112 (66%), Gaps = 1/112 (0%)
Frame = +3
Query: 72 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 251
M++KAELA VY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALE INV+DLI
Sbjct: 1 MSTKAELASVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEAINVKDLI 60
Query: 252 TNIGSGV-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFGLFD 404
TNIGSGV DDDMGFGLFD
Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>EF460788-1|ABQ10624.1| 1840|Drosophila melanogaster neurexin protein.
Length = 1840
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -1
Query: 271 TPDPMLVIKSRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSST 119
TP S + + A+ PGQ +TS+ A S S T+TSSST
Sbjct: 1538 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 1588
>BT023898-1|ABA81832.1| 1840|Drosophila melanogaster LP14275p protein.
Length = 1840
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -1
Query: 271 TPDPMLVIKSRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSST 119
TP S + + A+ PGQ +TS+ A S S T+TSSST
Sbjct: 1538 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 1588
>AY069731-1|AAL39876.1| 934|Drosophila melanogaster LP03809p
protein.
Length = 934
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -1
Query: 271 TPDPMLVIKSRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSST 119
TP S + + A+ PGQ +TS+ A S S T+TSSST
Sbjct: 632 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 682
>AE014297-3164|AAF56006.1| 1837|Drosophila melanogaster CG7050-PA
protein.
Length = 1837
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -1
Query: 271 TPDPMLVIKSRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSST 119
TP S + + A+ PGQ +TS+ A S S T+TSSST
Sbjct: 1535 TPSYATTQSSSSSSSGGSAASTPGQVSTTSSVATSSTQRATSSSTSTSSST 1585
>AY061562-1|AAL29110.1| 249|Drosophila melanogaster LP11415p
protein.
Length = 249
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +3
Query: 39 AFWRLARITFKMASKAELACVYSALILVDDDVAVTGEKISTI 164
+F L ++ FK+ S A L +A++ +D D A+T + ++ +
Sbjct: 174 SFIVLPQVVFKLQSLASLDAQNNAILEIDTDEAITSDNLALV 215
>AE014298-1718|AAF48118.1| 249|Drosophila melanogaster CG2471-PA
protein.
Length = 249
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +3
Query: 39 AFWRLARITFKMASKAELACVYSALILVDDDVAVTGEKISTI 164
+F L ++ FK+ S A L +A++ +D D A+T + ++ +
Sbjct: 174 SFIVLPQVVFKLQSLASLDAQNNAILEIDTDEAITSDNLALV 215
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 253 VIKSRTLMPSKAFANRPGQYGSTSTAAAFSMVEI 152
+I S+ L+P+K N P QY T+ A +I
Sbjct: 255 LIASQNLVPAKTHINSPTQYNDTNATNALKTAKI 288
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -1
Query: 244 SRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSSTR 116
S+ +P+K N P QY T+ A + SP S T+
Sbjct: 410 SQNFIPAKTHINIPTQYNDTNATKALKTAKAASPSHTYSRQTK 452
>U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative
single-stranded nucleicacid binding protein protein.
Length = 1043
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -1
Query: 244 SRTLMPSKAFANRPGQYGSTSTAAAFSMVEIFSPVTATSSSTR 116
S+ +P+K N P QY T+ A + SP S T+
Sbjct: 410 SQNFIPAKTHINIPTQYNDTNATKALKTAKAASPSHTYSRQTK 452
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,398,655
Number of Sequences: 53049
Number of extensions: 265098
Number of successful extensions: 735
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1643002263
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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