BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_H03
(552 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q24333 Cluster: Elastin like protein; n=1; Drosophila m... 37 0.27
UniRef50_Q7PUG1 Cluster: ENSANGP00000015834; n=1; Anopheles gamb... 37 0.36
UniRef50_Q9FCW8 Cluster: ORF616; n=46; root|Rep: ORF616 - Escher... 36 0.83
UniRef50_Q17GI9 Cluster: Putative uncharacterized protein; n=1; ... 34 1.9
UniRef50_Q4WZ75 Cluster: Putative uncharacterized protein; n=1; ... 34 1.9
UniRef50_Q8NF36 Cluster: FLJ00366 protein; n=2; Eutheria|Rep: FL... 33 3.3
UniRef50_Q675Z4 Cluster: Putative uncharacterized protein; n=1; ... 33 4.4
UniRef50_UPI0001553983 Cluster: PREDICTED: hypothetical protein;... 33 5.8
UniRef50_UPI0000EBC99A Cluster: PREDICTED: hypothetical protein;... 33 5.8
UniRef50_Q5D863 Cluster: Period 3; n=2; Simiiformes|Rep: Period ... 33 5.8
UniRef50_UPI000069DFE9 Cluster: UPI000069DFE9 related cluster; n... 32 7.7
UniRef50_Q9D367 Cluster: Adult male olfactory brain cDNA, RIKEN ... 32 7.7
UniRef50_Q23KB2 Cluster: Putative uncharacterized protein; n=1; ... 32 7.7
UniRef50_A2R725 Cluster: Function: H. jecorina ACEI protein is D... 32 7.7
>UniRef50_Q24333 Cluster: Elastin like protein; n=1; Drosophila
melanogaster|Rep: Elastin like protein - Drosophila
melanogaster (Fruit fly)
Length = 110
Score = 37.1 bits (82), Expect = 0.27
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 57 DPPGCRNSAQGWSGANLPGDMWSGVSLPG 143
DPPGCRNSA+ ANL +++G PG
Sbjct: 14 DPPGCRNSARDRQRANLNSQLYAGYPYPG 42
>UniRef50_Q7PUG1 Cluster: ENSANGP00000015834; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000015834 - Anopheles gambiae
str. PEST
Length = 240
Score = 36.7 bits (81), Expect = 0.36
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +1
Query: 229 SXLEQYMAGTKAALDKELDAYM 294
S L+QYMA TK++LDKE+D YM
Sbjct: 216 SELDQYMANTKSSLDKEMDQYM 237
>UniRef50_Q9FCW8 Cluster: ORF616; n=46; root|Rep: ORF616 -
Escherichia coli
Length = 616
Score = 35.5 bits (78), Expect = 0.83
Identities = 25/73 (34%), Positives = 34/73 (46%)
Frame = +1
Query: 58 IPRAAGIRHKGGLGPTCQGTCGLGSACQGTFSKRTW*RRYTTETGSEDDAHQGGAGRSXL 237
IP AGI L P C+G +GTFS +TG+ D+ + G G+
Sbjct: 161 IPNNAGIL----LVPCCRGGSAFTQGAEGTFS---------ADTGASQDSARWGVGKPLY 207
Query: 238 EQYMAGTKAALDK 276
+ +A TKAAL K
Sbjct: 208 QDLIARTKAALQK 220
>UniRef50_Q17GI9 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 103
Score = 34.3 bits (75), Expect = 1.9
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +1
Query: 235 LEQYMAGTKAALDKELDAYM 294
L+QYMA TK++LD+E+D YM
Sbjct: 77 LDQYMANTKSSLDREMDEYM 96
>UniRef50_Q4WZ75 Cluster: Putative uncharacterized protein; n=1;
Aspergillus fumigatus|Rep: Putative uncharacterized
protein - Aspergillus fumigatus (Sartorya fumigata)
Length = 149
Score = 34.3 bits (75), Expect = 1.9
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 189 CFRCVPPL-PRPLAECPLAG*PQTTCPLAGWPQTTLVPNSCS 67
C RC P L P P + L+G +TTC L GW TL+P S
Sbjct: 73 CTRCSPGLLPGPHTQHMLSG-AETTCLLLGWLSPTLLPGPTS 113
>UniRef50_Q8NF36 Cluster: FLJ00366 protein; n=2; Eutheria|Rep:
FLJ00366 protein - Homo sapiens (Human)
Length = 282
Score = 33.5 bits (73), Expect = 3.3
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 213 LVSIVFGPCFRCVPPLPRPLAECPLAG*PQTTCPLAGWPQTT-LVPNSCSPGDH 55
L + + G C P PR PLA PL+ WP + L+P CSPG H
Sbjct: 28 LPTAMSGECLHSTCPAPRLFLPPPLA------VPLSRWPPCSCLIPPPCSPGRH 75
>UniRef50_Q675Z4 Cluster: Putative uncharacterized protein; n=1;
Oikopleura dioica|Rep: Putative uncharacterized protein
- Oikopleura dioica (Tunicate)
Length = 203
Score = 33.1 bits (72), Expect = 4.4
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +1
Query: 235 LEQYMAGTKAALDKELDAYM 294
+++YM+GTKA LDK++D YM
Sbjct: 177 MDKYMSGTKAYLDKQMDEYM 196
>UniRef50_UPI0001553983 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 250
Score = 32.7 bits (71), Expect = 5.8
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -1
Query: 264 SLRPRHVLFQXXXXXXSLVSIVFGPCFRCVPPLPRPLAECPLAG*PQ--TTCPLAGWPQT 91
S+ PRH LFQ L SI CVPP P+P A PL+ PQ +T A +P +
Sbjct: 22 SIHPRHRLFQVFLNNLLLASI-------CVPP-PQPPASQPLSN-PQNLSTLVQAPFPCS 72
Query: 90 TLVPNSCSP 64
++ N +P
Sbjct: 73 SVTTNRTAP 81
>UniRef50_UPI0000EBC99A Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 158
Score = 32.7 bits (71), Expect = 5.8
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
Frame = +1
Query: 61 PRAAGIRHKGGLGPTCQGT-CGLGSACQGTFS-----KRTW*RRYTTETGSEDDAHQGGA 222
PR + + GPT GT G G C+G K+TW R T G+E A + A
Sbjct: 58 PRTQPVNRRTAGGPTLAGTGAGRGGGCRGPEDAKRARKQTWERGVTWGPGAESPAGEERA 117
Query: 223 GRS 231
RS
Sbjct: 118 SRS 120
>UniRef50_Q5D863 Cluster: Period 3; n=2; Simiiformes|Rep: Period 3 -
Callithrix jacchus (Common marmoset)
Length = 144
Score = 32.7 bits (71), Expect = 5.8
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 8/43 (18%)
Frame = -3
Query: 145 SPGRLTPDHM--------SPGRLAPDHPCAEFLQPGGSPKXXP 41
SP R TP H SP R AP HP A L PG P+ P
Sbjct: 37 SPPRETPSHPTASVLSTGSPPREAPSHPSASELSPGSPPRETP 79
>UniRef50_UPI000069DFE9 Cluster: UPI000069DFE9 related cluster; n=1;
Xenopus tropicalis|Rep: UPI000069DFE9 UniRef100 entry -
Xenopus tropicalis
Length = 112
Score = 32.3 bits (70), Expect = 7.7
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = -1
Query: 189 CFRCVPPLPRPLAE-CPLAG*PQTTCPLAGW-----PQTTLVPNSCSPGDH 55
C VPP PL CP A P + PL W P +TLVP+S +P H
Sbjct: 44 CPAAVPPYSAPLVHWCP-AAVPPYSAPLVHWCQEQCPPSTLVPSSSAPLVH 93
>UniRef50_Q9D367 Cluster: Adult male olfactory brain cDNA, RIKEN
full-length enriched library, clone:6430628N08
product:hypothetical protein, full insert sequence; n=1;
Mus musculus|Rep: Adult male olfactory brain cDNA, RIKEN
full-length enriched library, clone:6430628N08
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 176
Score = 32.3 bits (70), Expect = 7.7
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Frame = -2
Query: 158 LLLNVPWQADPRP-HVPWQVG---PRPPLCRIPAARGIT 54
LLL+ P P P +PW + PRPP CR P R +T
Sbjct: 100 LLLHPPAAPAPAPASLPWTLPHRQPRPPTCRAPKGRSLT 138
>UniRef50_Q23KB2 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 507
Score = 32.3 bits (70), Expect = 7.7
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2
Query: 509 YLNPPQNDSIFRGKFIKKNHHDTESRLTLINIKTTQKLLSRFKLR 375
YLN P ND IF +++ N S+ L N K+ Q L+ F +
Sbjct: 165 YLNQPSNDQIFYSHYLQNNTSLQNSKNVLENYKSQQGDLNTFTFK 209
>UniRef50_A2R725 Cluster: Function: H. jecorina ACEI protein is
DNA-binding; n=1; Aspergillus niger|Rep: Function: H.
jecorina ACEI protein is DNA-binding - Aspergillus niger
Length = 739
Score = 32.3 bits (70), Expect = 7.7
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -3
Query: 148 MSPGRLTPDHMSPGRLAPDHPC-AEFLQPGGSP 53
MSP +L+PDHMSP ++ PD AE L SP
Sbjct: 571 MSPLQLSPDHMSPLQMTPDRASPAEMLSLQMSP 603
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,944,586
Number of Sequences: 1657284
Number of extensions: 10791910
Number of successful extensions: 32179
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 29762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32049
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -