Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_H03
         (552 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   0.77 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.3  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   5.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   7.2  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   7.2  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 24.2 bits (50), Expect = 0.77
 Identities = 11/33 (33%), Positives = 22/33 (66%)
 Frame = +3

Query: 288 LHEECSRDTLATMN*NLDCLMNDIKDADLPKLE 386
           +H++CS  TL  +  NLD L+ D+ + D+ +++
Sbjct: 305 VHKKCSNFTLPEIQHNLDVLV-DMCEQDIIRID 336


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 87   LVPNSCSPGDHQN 49
            LVP +C+PG H N
Sbjct: 1229 LVPQNCAPGLHYN 1241


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -1

Query: 105 GWPQTTLVPNSCSPG 61
           GWPQ  L+P     G
Sbjct: 581 GWPQHMLIPKGTPEG 595


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -1

Query: 105 GWPQTTLVPNSCSPG 61
           GWPQ  L+P     G
Sbjct: 580 GWPQHMLLPKGTEAG 594


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/33 (27%), Positives = 13/33 (39%)
 Frame = -3

Query: 184 PLXXXXXXXXX*MSPGRLTPDHMSPGRLAPDHP 86
           P+          +SP   TP+  S     P+HP
Sbjct: 46  PVSFSMGGHGSLLSPSGNTPNKSSTSPYPPNHP 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,659
Number of Sequences: 336
Number of extensions: 2626
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)