Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_H02
         (504 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   2.7  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   2.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.6  

>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 330 YGTASNV-GQRIWS*RTTNEKITCGRKSS 413
           Y   +N+ G  IWS  T +   TCG K++
Sbjct: 337 YAKDNNLAGVMIWSIETDDLHATCGTKNA 365


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -1

Query: 111 WFIHGLIIPVTIIHVHFFT 55
           W + G+++    +HV FFT
Sbjct: 106 WVLLGVMVVTVDLHVFFFT 124


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 85  WYDEPMNEPFY 117
           WYD P N+ +Y
Sbjct: 30  WYDFPTNQKYY 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,792
Number of Sequences: 336
Number of extensions: 1095
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)