Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_H01
(427 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 101 2e-22
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 54 4e-08
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 52 2e-07
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 51 3e-07
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 46 1e-05
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 45 2e-05
10_08_0620 - 19321612-19323237 43 9e-05
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 42 2e-04
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 40 0.001
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 38 0.003
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 38 0.004
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238... 29 1.2
04_04_1189 + 31586991-31587291,31587358-31587397,31587449-315875... 29 2.1
03_02_0142 + 5877480-5879663,5879783-5879898,5880749-5882419,588... 29 2.1
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 29 2.1
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 28 2.7
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297... 28 2.7
03_05_0407 - 23906388-23906966,23907028-23907915,23908141-239087... 28 3.6
08_02_0679 + 20006105-20006488,20006615-20006848,20007929-20008138 27 4.8
06_01_0001 - 18456-18521,18692-18874,19046-19153,19337-19396,197... 27 4.8
06_02_0316 - 14241729-14242049 27 6.3
06_01_0636 + 4627533-4628546 27 6.3
05_07_0367 - 29700855-29700920,29701092-29701149,29701446-297015... 27 8.3
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 27 8.3
02_03_0245 + 16802005-16802814,16802849-16803310,16804233-16804448 27 8.3
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 101 bits (243), Expect = 2e-22
Identities = 43/70 (61%), Positives = 62/70 (88%)
Frame = +2
Query: 119 AVAFDEYGRPFIIIKDQEKQNRLTGIDALKSHIQAARQIAGILRTSLGPRGLDKLMVSSD 298
A+AFDE+GRPFII+++QEK++RL G+DA K++I A + +A ILRTSLGP+G+DK++ S D
Sbjct: 2 ALAFDEFGRPFIILREQEKKSRLRGLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSPD 61
Query: 299 GEVTVTNDGS 328
G+VT+TNDG+
Sbjct: 62 GDVTITNDGA 71
Score = 36.3 bits (80), Expect = 0.010
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +3
Query: 327 ATILKMMDVEHQIGKLLVQLPARVRIDEIGDGT 425
ATIL+ MDV++QI KL+V+L + EIGDGT
Sbjct: 71 ATILEQMDVDNQIAKLMVELSCS-QDYEIGDGT 102
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 54.4 bits (125), Expect = 4e-08
Identities = 25/61 (40%), Positives = 42/61 (68%)
Frame = +2
Query: 146 PFIIIKDQEKQNRLTGIDALKSHIQAARQIAGILRTSLGPRGLDKLMVSSDGEVTVTNDG 325
P +++KD K R +G ++IQAA+ +A I+RT+LGPR + K+++ + G + VTNDG
Sbjct: 6 PVLVLKDSLK--RESGTKVHHANIQAAKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDG 63
Query: 326 S 328
+
Sbjct: 64 N 64
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 52.0 bits (119), Expect = 2e-07
Identities = 24/61 (39%), Positives = 42/61 (68%)
Frame = +2
Query: 146 PFIIIKDQEKQNRLTGIDALKSHIQAARQIAGILRTSLGPRGLDKLMVSSDGEVTVTNDG 325
P +++KD K R +G ++IQAA+ +A I+RT+LGP+ + K+++ + G + VTNDG
Sbjct: 6 PVLVLKDSLK--RESGTKVHHANIQAAKAVADIIRTTLGPQSMLKMLLDAAGGIVVTNDG 63
Query: 326 S 328
+
Sbjct: 64 N 64
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 51.2 bits (117), Expect = 3e-07
Identities = 22/39 (56%), Positives = 31/39 (79%)
Frame = +2
Query: 212 HIQAARQIAGILRTSLGPRGLDKLMVSSDGEVTVTNDGS 328
+I AAR +A +RTSLGPRG+DK++ S + EV +TNDG+
Sbjct: 31 NIAAARAVADAVRTSLGPRGMDKMISSGEQEVIITNDGA 69
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 46.4 bits (105), Expect = 1e-05
Identities = 21/55 (38%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +2
Query: 167 QEKQNRLTGID-ALKSHIQAARQIAGILRTSLGPRGLDKLMVSSDGEVTVTNDGS 328
+E L+G+D A+ +I A R+++ I RTSLGP G++K++++ ++ VTND +
Sbjct: 11 KEGHKHLSGLDEAVLKNIDACRELSAITRTSLGPNGMNKMVINHLDKLFVTNDAA 65
Score = 31.1 bits (67), Expect = 0.39
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 327 ATILKMMDVEHQIGKLLVQLPARVRIDEIGDG 422
ATI+ ++V+H K+LV L R + +EIGDG
Sbjct: 65 ATIVNELEVQHPAAKILV-LAGRAQQEEIGDG 95
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 45.2 bits (102), Expect = 2e-05
Identities = 23/58 (39%), Positives = 35/58 (60%)
Frame = +2
Query: 155 IIKDQEKQNRLTGIDALKSHIQAARQIAGILRTSLGPRGLDKLMVSSDGEVTVTNDGS 328
II +E + G + S+I A +A +RT+LGPRG+DKL+ G T++NDG+
Sbjct: 9 IILLKEGTDTSQGRAQVVSNINACTVVADTVRTTLGPRGMDKLIHDDKGGTTISNDGA 66
>10_08_0620 - 19321612-19323237
Length = 541
Score = 43.2 bits (97), Expect = 9e-05
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Frame = +2
Query: 212 HIQAARQIAGILRTSLGPRGLDKLMVSS----DGEVTVTNDGS 328
+I A R +A RTSLGPRG+DK++ SS D V +TNDG+
Sbjct: 31 NIAAGRAVAAAARTSLGPRGMDKMISSSSSGGDQAVIITNDGA 73
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/43 (39%), Positives = 30/43 (69%)
Frame = +2
Query: 200 ALKSHIQAARQIAGILRTSLGPRGLDKLMVSSDGEVTVTNDGS 328
AL +I AA+ + +L+T+LGP+G K++V G++ +T DG+
Sbjct: 18 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGN 60
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Frame = +2
Query: 155 IIKDQEKQNRLTGIDALKSHIQAARQIAGILRTSLGPRGLDKLMVSS--DGEVTVTNDGS 328
++KD + + G A + A IA +++T+LGP+G+DK++ S+ VTVTNDG+
Sbjct: 4 VLKDDAVEEK--GERARMAAFIGAMAIADLVKTTLGPKGMDKILQSTGRGRSVTVTNDGA 61
Score = 33.5 bits (73), Expect = 0.073
Identities = 15/33 (45%), Positives = 25/33 (75%)
Frame = +3
Query: 327 ATILKMMDVEHQIGKLLVQLPARVRIDEIGDGT 425
ATILK + +++ K+LV + ++V+ DE+GDGT
Sbjct: 61 ATILKSLHIDNPAAKVLVDI-SKVQDDEVGDGT 92
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 37.9 bits (84), Expect = 0.003
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +3
Query: 327 ATILKMMDVEHQIGKLLVQLPARVRIDEIGDGT 425
ATIL+M++VEH K+LV+L A ++ E+GDGT
Sbjct: 16 ATILRMLEVEHPAAKVLVEL-AELQDREVGDGT 47
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 37.5 bits (83), Expect = 0.004
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Frame = +2
Query: 155 IIKDQEKQNRLTGIDALKSHIQAARQIAGILRTSLGPRGLDKLMVSS--DGEVTVTNDGS 328
++KD + + G A + I+ +++T+LGP+G+DK++ S+ VTVTNDG+
Sbjct: 5 LLKDDATEEK--GERARMASFVGGMAISDLVKTTLGPKGMDKILQSTGRGRSVTVTNDGA 62
Score = 33.5 bits (73), Expect = 0.073
Identities = 15/33 (45%), Positives = 25/33 (75%)
Frame = +3
Query: 327 ATILKMMDVEHQIGKLLVQLPARVRIDEIGDGT 425
ATILK + +++ K+LV + ++V+ DE+GDGT
Sbjct: 62 ATILKSLHIDNPAAKVLVDI-SKVQDDEVGDGT 93
>03_01_0305 -
2383187-2383298,2383606-2383684,2383762-2383867,
2383941-2384044,2384141-2384240,2384533-2384628,
2384724-2384801,2385355-2385423,2385511-2385591,
2385670-2385759,2385859-2385945,2386022-2386126,
2386591-2386686,2386796-2386971,2387225-2387384,
2387898-2388029,2388236-2388260,2389023-2389174
Length = 615
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = +2
Query: 191 GIDALKSHIQAARQIAGILRTSLGPRGLDKLMVSSDGEVTVTNDG 325
G++A ++ ++A ++ ++GP+G ++ S G VT DG
Sbjct: 78 GVEARALMLRGVEELADAVKVTMGPKGRTVVIEQSFGAPKVTKDG 122
>04_04_1189 +
31586991-31587291,31587358-31587397,31587449-31587534,
31587535-31588097,31588250-31589913,31589956-31590066,
31590152-31591181,31591234-31591406,31591535-31591814,
31592275-31592331
Length = 1434
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -3
Query: 419 ITDLINPDSGGKLYQKLSNLMLDVHHLENCRFRHLSQSPR 300
IT +P+S L LS L HLENCR + +SP+
Sbjct: 809 ITGYSDPNSPTWLSSNLSVTSLQTIHLENCREWKILRSPK 848
>03_02_0142 + 5877480-5879663,5879783-5879898,5880749-5882419,
5882570-5882618,5882703-5882941,5883073-5883174,
5883634-5883862
Length = 1529
Score = 28.7 bits (61), Expect = 2.1
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 221 AARQIAGILRTSLGPRGLDKLMVSSDGEVTVTNDGSDNSQDDGRRASDWKASGTASRQSQ 400
+A+++AG+ + P L +M + T GS + D G+RAS T+S SQ
Sbjct: 926 SAQRLAGVQPNKITPNILQSMMFPNSAADT-NLWGSQKADDQGQRASTPSDVATSSTNSQ 984
Query: 401 D 403
+
Sbjct: 985 N 985
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 200 ALKSHIQAARQIAGILRTSLGPRGLDKLMVSSDGEVTVTNDG 325
A+K ++A ++ +LGP+G + ++ S G + NDG
Sbjct: 64 AIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDG 105
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 200 ALKSHIQAARQIAGILRTSLGPRGLDKLMVSSDGEVTVTNDG 325
A+K ++A ++ +LGP+G + ++ S G + NDG
Sbjct: 68 AIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDG 109
>05_06_0240 -
26629218-26629323,26629412-26629490,26629656-26629761,
26629844-26629947,26630069-26630168,26630256-26630351,
26630464-26630541,26630603-26630671,26630766-26630846,
26630879-26630935,26631016-26631105,26631192-26631278,
26631690-26631794,26631899-26631994,26632222-26632397,
26632847-26633006,26633151-26633600
Length = 679
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +2
Query: 191 GIDALKSHIQAARQIAGILRTSLGPRGLDKLMVSSDGEVTVTNDG 325
G+ A + +Q +A ++ ++GP+G + ++ S VT DG
Sbjct: 125 GVGARAALLQGVNDLADAVKVTMGPKGRNVIIERSHRAPKVTKDG 169
>03_05_0407 -
23906388-23906966,23907028-23907915,23908141-23908753,
23908858-23909021
Length = 747
Score = 27.9 bits (59), Expect = 3.6
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 272 LDKLMVSSDGEVTVTNDGSDNSQDDG-RRASDWKASGTASRQSQD 403
L+ ++ S DGEV +DG+ S D G S K G+ Q +D
Sbjct: 51 LEAMISSKDGEVQQVSDGTAQSGDKGIADGSGDKGDGSQGVQGED 95
>08_02_0679 + 20006105-20006488,20006615-20006848,20007929-20008138
Length = 275
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = -2
Query: 216 ICDFRASIPVSLFCFSWSFIIINGR-----PYSSKATAPGNMAIFK 94
+CD + +PV+++ SF N +SK +A G+MA+FK
Sbjct: 228 MCDCKKLLPVAVYLLKCSFTFTNFSFDFIWNVNSKCSAYGHMAVFK 273
>06_01_0001 -
18456-18521,18692-18874,19046-19153,19337-19396,
19755-19937,20109-20291,20816-20998,21170-21352,
21524-21581,21878-21935,22586-22643,22938-22995,
23292-23349,23998-24007
Length = 482
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 291 LTMSLSRPLGPRDVRRIPAICRAAW-ICDFRASIP 190
LT SL GP D+RR A+W +C RA +P
Sbjct: 257 LTTSLKTSCGPSDIRRFAETTAASWPMC--RARLP 289
>06_02_0316 - 14241729-14242049
Length = 106
Score = 27.1 bits (57), Expect = 6.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 293 SDGEVTVTNDGSDNSQDDGRRASDWK 370
SDGEV T G DGRR W+
Sbjct: 26 SDGEVHGTEAGCGEPTGDGRRGRGWR 51
>06_01_0636 + 4627533-4628546
Length = 337
Score = 27.1 bits (57), Expect = 6.3
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 218 QAARQIAGILRTSLGPRGLD-KLMVSSDGEVTVTNDGSDNSQDDGRRASDWKASGTASRQ 394
Q AR+IA ILRT+ P + M GE+ + + D DGRR +D + +RQ
Sbjct: 107 QIAREIA-ILRTAEHPAVVRCHDMYERGGELQILLEYMDGGSLDGRRIADERFLADVARQ 165
>05_07_0367 - 29700855-29700920,29701092-29701149,29701446-29701503,
29701800-29701857,29702154-29702211,29702508-29702551,
29702840-29703022,29703192-29703249,29703545-29703602,
29703897-29703954,29704250-29704307,29704956-29705013,
29705310-29705367,29705664-29705721,29706348-29706398,
29706695-29706752,29707049-29707106,29707403-29707459,
29707754-29707810,29708085-29708135,29708431-29708507,
29708785-29708842,29709139-29709195,29709490-29709546,
29709821-29709893,29710167-29710224,29710521-29710578,
29710875-29710931,29711558-29711608,29711904-29711980,
29712258-29712315,29712612-29712669,29712966-29713016,
29713667-29713717,29714014-29714057,29714368-29714444,
29714722-29714779,29715076-29715126,29715423-29715480,
29715776-29715833,29716130-29716187,29716484-29716534,
29716831-29716907,29717185-29717242,29717539-29717589,
29718240-29718316,29718594-29718651,29718947-29719004,
29719301-29719351,29719648-29719705,29723277-29723334,
29723631-29723681,29724331-29724388,29724684-29724741,
29725038-29725088,29725385-29725442,29725738-29725814,
29726092-29726148,29726444-29726501,29726798-29726848,
29727070-29727075
Length = 1209
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 291 LTMSLSRPLGPRDVRRIPAICRAAWICDFRAS 196
LT SL GP D+RR A+W F S
Sbjct: 1070 LTTSLKTSCGPSDIRRFTETTAASWPMIFDVS 1101
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 300 PSELTMSLSRPLGPRDVRRIPAICRA 223
P ++ + R LGP D R A+CRA
Sbjct: 51 PIDVLAQILRLLGPADAARSTAVCRA 76
>02_03_0245 + 16802005-16802814,16802849-16803310,16804233-16804448
Length = 495
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 325 SVICHSHLAIRTHHELIETPRTKGRA 248
SV CH H A+ + E PR GRA
Sbjct: 268 SVHCHIHAALASDVEAENNPRNHGRA 293
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,540,764
Number of Sequences: 37544
Number of extensions: 257461
Number of successful extensions: 851
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 790518168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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