Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_H01
(427 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 106 8e-24
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 106 8e-24
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 106 8e-24
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 56 1e-08
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 56 1e-08
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 55 2e-08
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 55 2e-08
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 50 7e-07
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 50 7e-07
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 45 3e-05
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 43 1e-04
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 43 1e-04
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 43 1e-04
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 42 1e-04
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 42 1e-04
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 36 0.009
Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical p... 27 5.6
Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 27 5.6
Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical p... 27 5.6
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 27 5.6
U50067-4|AAA93439.3| 1144|Caenorhabditis elegans Sensory axon gu... 27 5.6
U50067-3|AAZ32801.1| 1147|Caenorhabditis elegans Sensory axon gu... 27 5.6
U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon gu... 27 5.6
U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon gu... 27 5.6
AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C... 27 5.6
AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B... 27 5.6
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 27 5.6
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 27 5.6
AF130443-1|AAD28468.1| 956|Caenorhabditis elegans EAG K+ channe... 27 5.6
AF036695-1|AAB88348.2| 956|Caenorhabditis elegans Egg laying de... 27 5.6
AB206670-1|BAD97389.1| 1147|Caenorhabditis elegans SAX-7 SHORTFO... 27 5.6
AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFOR... 27 5.6
U41263-7|AAC24431.1| 462|Caenorhabditis elegans Hypothetical pr... 27 7.4
U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated p... 27 7.4
U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated p... 27 7.4
AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interact... 27 7.4
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 26 9.8
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 26 9.8
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 106 bits (254), Expect = 8e-24
Identities = 46/76 (60%), Positives = 62/76 (81%)
Frame = +2
Query: 101 MAMFPGAVAFDEYGRPFIIIKDQEKQNRLTGIDALKSHIQAARQIAGILRTSLGPRGLDK 280
MA + FDE G+PFI++++QE Q R+TG++A+KSHI AAR +A LRTSLGPRGLDK
Sbjct: 1 MAQSSAQLLFDESGQPFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDK 60
Query: 281 LMVSSDGEVTVTNDGS 328
++VS DG+VT+TNDG+
Sbjct: 61 MLVSPDGDVTITNDGA 76
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +3
Query: 327 ATILKMMDVEHQIGKLLVQLPARVRIDEIGDGT 425
ATI++ MDV+H + KL+V+L ++ + EIGDGT
Sbjct: 76 ATIMEKMDVQHHVAKLMVEL-SKSQDHEIGDGT 107
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 106 bits (254), Expect = 8e-24
Identities = 46/76 (60%), Positives = 62/76 (81%)
Frame = +2
Query: 101 MAMFPGAVAFDEYGRPFIIIKDQEKQNRLTGIDALKSHIQAARQIAGILRTSLGPRGLDK 280
MA + FDE G+PFI++++QE Q R+TG++A+KSHI AAR +A LRTSLGPRGLDK
Sbjct: 1 MAQSSAQLLFDESGQPFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDK 60
Query: 281 LMVSSDGEVTVTNDGS 328
++VS DG+VT+TNDG+
Sbjct: 61 MLVSPDGDVTITNDGA 76
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +3
Query: 327 ATILKMMDVEHQIGKLLVQLPARVRIDEIGDGT 425
ATI++ MDV+H + KL+V+L ++ + EIGDGT
Sbjct: 76 ATIMEKMDVQHHVAKLMVEL-SKSQDHEIGDGT 107
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 106 bits (254), Expect = 8e-24
Identities = 46/76 (60%), Positives = 62/76 (81%)
Frame = +2
Query: 101 MAMFPGAVAFDEYGRPFIIIKDQEKQNRLTGIDALKSHIQAARQIAGILRTSLGPRGLDK 280
MA + FDE G+PFI++++QE Q R+TG++A+KSHI AAR +A LRTSLGPRGLDK
Sbjct: 1 MAQSSAQLLFDESGQPFIVMREQENQKRITGVEAVKSHILAARAVANTLRTSLGPRGLDK 60
Query: 281 LMVSSDGEVTVTNDGS 328
++VS DG+VT+TNDG+
Sbjct: 61 MLVSPDGDVTITNDGA 76
Score = 37.5 bits (83), Expect = 0.004
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +3
Query: 327 ATILKMMDVEHQIGKLLVQLPARVRIDEIGDGT 425
ATI++ MDV+H + KL+V+L ++ + EIGDGT
Sbjct: 76 ATIMEKMDVQHHVAKLMVEL-SKSQDHEIGDGT 107
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 56.0 bits (129), Expect = 1e-08
Identities = 27/61 (44%), Positives = 41/61 (67%)
Frame = +2
Query: 146 PFIIIKDQEKQNRLTGIDALKSHIQAARQIAGILRTSLGPRGLDKLMVSSDGEVTVTNDG 325
P I++KD + + G + S+I A + +A +RT+LGPRGLDKL+V S G T++NDG
Sbjct: 5 PIILLKDGTENKQ--GKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDG 62
Query: 326 S 328
+
Sbjct: 63 A 63
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 56.0 bits (129), Expect = 1e-08
Identities = 27/61 (44%), Positives = 41/61 (67%)
Frame = +2
Query: 146 PFIIIKDQEKQNRLTGIDALKSHIQAARQIAGILRTSLGPRGLDKLMVSSDGEVTVTNDG 325
P I++KD + + G + S+I A + +A +RT+LGPRGLDKL+V S G T++NDG
Sbjct: 5 PIILLKDGTENKQ--GKGQIISNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDG 62
Query: 326 S 328
+
Sbjct: 63 A 63
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 55.2 bits (127), Expect = 2e-08
Identities = 23/40 (57%), Positives = 34/40 (85%)
Frame = +2
Query: 209 SHIQAARQIAGILRTSLGPRGLDKLMVSSDGEVTVTNDGS 328
S+I AA+ +A +RTSLGPRG+DK++ S +G+VT+TNDG+
Sbjct: 35 SNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGA 74
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 55.2 bits (127), Expect = 2e-08
Identities = 23/40 (57%), Positives = 34/40 (85%)
Frame = +2
Query: 209 SHIQAARQIAGILRTSLGPRGLDKLMVSSDGEVTVTNDGS 328
S+I AA+ +A +RTSLGPRG+DK++ S +G+VT+TNDG+
Sbjct: 35 SNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGA 74
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 50.0 bits (114), Expect = 7e-07
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +2
Query: 182 RLTGIDALKSHIQAARQIAGILRTSLGPRGLDKLMVSSDGEVTVTNDGS 328
R TG ++ AA IA I+++SLGP GLDK++V G+V VTNDG+
Sbjct: 15 RTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGA 63
Score = 41.5 bits (93), Expect = 2e-04
Identities = 19/33 (57%), Positives = 28/33 (84%)
Frame = +3
Query: 327 ATILKMMDVEHQIGKLLVQLPARVRIDEIGDGT 425
ATILK ++VEH GK+LV+L A+++ +E+GDGT
Sbjct: 63 ATILKQLEVEHPAGKVLVEL-AQLQDEEVGDGT 94
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 50.0 bits (114), Expect = 7e-07
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +2
Query: 182 RLTGIDALKSHIQAARQIAGILRTSLGPRGLDKLMVSSDGEVTVTNDGS 328
R TG ++ AA IA I+++SLGP GLDK++V G+V VTNDG+
Sbjct: 15 RTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGA 63
Score = 41.5 bits (93), Expect = 2e-04
Identities = 19/33 (57%), Positives = 28/33 (84%)
Frame = +3
Query: 327 ATILKMMDVEHQIGKLLVQLPARVRIDEIGDGT 425
ATILK ++VEH GK+LV+L A+++ +E+GDGT
Sbjct: 63 ATILKQLEVEHPAGKVLVEL-AQLQDEEVGDGT 94
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 44.8 bits (101), Expect = 3e-05
Identities = 22/62 (35%), Positives = 37/62 (59%)
Frame = +2
Query: 143 RPFIIIKDQEKQNRLTGIDALKSHIQAARQIAGILRTSLGPRGLDKLMVSSDGEVTVTND 322
+P I++ K R +G +I A + IA ++RTSLGPR + K+++ G + +TND
Sbjct: 7 QPIIVLSQGTK--RESGHQVQIGNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTND 64
Query: 323 GS 328
G+
Sbjct: 65 GN 66
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 42.7 bits (96), Expect = 1e-04
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Frame = +2
Query: 146 PFIIIKDQEKQNRLTGIDALKSHIQAARQIAGILRTSLGPRGLDKLMVS----SDGEVTV 313
P I+KD ++ R G A S A I +++++LGP+G+DK+++S S G + V
Sbjct: 3 PVQILKDNAQEER--GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 314 TNDGS 328
TNDG+
Sbjct: 61 TNDGA 65
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 42.7 bits (96), Expect = 1e-04
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Frame = +2
Query: 146 PFIIIKDQEKQNRLTGIDALKSHIQAARQIAGILRTSLGPRGLDKLMVS----SDGEVTV 313
P I+KD ++ R G A S A I +++++LGP+G+DK+++S S G + V
Sbjct: 3 PVQILKDNAQEER--GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 314 TNDGS 328
TNDG+
Sbjct: 61 TNDGA 65
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 42.7 bits (96), Expect = 1e-04
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Frame = +2
Query: 146 PFIIIKDQEKQNRLTGIDALKSHIQAARQIAGILRTSLGPRGLDKLMVS----SDGEVTV 313
P I+KD ++ R G A S A I +++++LGP+G+DK+++S S G + V
Sbjct: 3 PVQILKDNAQEER--GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKV 60
Query: 314 TNDGS 328
TNDG+
Sbjct: 61 TNDGA 65
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 42.3 bits (95), Expect = 1e-04
Identities = 17/43 (39%), Positives = 31/43 (72%)
Frame = +2
Query: 200 ALKSHIQAARQIAGILRTSLGPRGLDKLMVSSDGEVTVTNDGS 328
AL+ +I AR + ++R++LGP+G K++VS G++ +T DG+
Sbjct: 19 ALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGN 61
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 42.3 bits (95), Expect = 1e-04
Identities = 17/43 (39%), Positives = 31/43 (72%)
Frame = +2
Query: 200 ALKSHIQAARQIAGILRTSLGPRGLDKLMVSSDGEVTVTNDGS 328
AL+ +I AR + ++R++LGP+G K++VS G++ +T DG+
Sbjct: 19 ALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGN 61
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 36.3 bits (80), Expect = 0.009
Identities = 13/44 (29%), Positives = 32/44 (72%)
Frame = +2
Query: 197 DALKSHIQAARQIAGILRTSLGPRGLDKLMVSSDGEVTVTNDGS 328
+A++ +I+A ++A +R++ GP G++K++++ ++ VTND +
Sbjct: 26 EAVQRNIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAA 69
Score = 26.2 bits (55), Expect = 9.8
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = +3
Query: 327 ATILKMMDVEHQIGKLLVQLPARVRIDEIGDGT 425
ATILK ++++H ++++ + ++ +IGD T
Sbjct: 69 ATILKELEIQHPAARIII-MATEMQEKQIGDNT 100
>Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 290 SSDGEVTVTNDGSDNSQDDGRRASDWKASG 379
+++GE T +N+G+D+ +D+G S +SG
Sbjct: 282 TTEGE-TASNEGADSDEDEGSMPSQESSSG 310
>Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 290 SSDGEVTVTNDGSDNSQDDGRRASDWKASG 379
+++GE T +N+G+D+ +D+G S +SG
Sbjct: 282 TTEGE-TASNEGADSDEDEGSMPSQESSSG 310
>Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 290 SSDGEVTVTNDGSDNSQDDGRRASDWKASG 379
+++GE T +N+G+D+ +D+G S +SG
Sbjct: 282 TTEGE-TASNEGADSDEDEGSMPSQESSSG 310
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 290 SSDGEVTVTNDGSDNSQDDGRRASDWKASG 379
+++GE T +N+G+D+ +D+G S +SG
Sbjct: 282 TTEGE-TASNEGADSDEDEGSMPSQESSSG 310
>U50067-4|AAA93439.3| 1144|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform a protein.
Length = 1144
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 314 TNDGSDNSQDDGRRASDWKASGTASRQS 397
++D S++ +DD +R WK S RQS
Sbjct: 727 SDDSSEDDEDDEKRKFRWKRSIRVKRQS 754
>U50067-3|AAZ32801.1| 1147|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform d protein.
Length = 1147
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 314 TNDGSDNSQDDGRRASDWKASGTASRQS 397
++D S++ +DD +R WK S RQS
Sbjct: 727 SDDSSEDDEDDEKRKFRWKRSIRVKRQS 754
>U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform b protein.
Length = 1328
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 314 TNDGSDNSQDDGRRASDWKASGTASRQS 397
++D S++ +DD +R WK S RQS
Sbjct: 911 SDDSSEDDEDDEKRKFRWKRSIRVKRQS 938
>U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform c protein.
Length = 1331
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 314 TNDGSDNSQDDGRRASDWKASGTASRQS 397
++D S++ +DD +R WK S RQS
Sbjct: 911 SDDSSEDDEDDEKRKFRWKRSIRVKRQS 938
>AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C
protein.
Length = 1347
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 290 SSDGEVTVTNDGSDNSQDDGRRASDWKASG 379
+++GE T +N+G+D+ +D+G S +SG
Sbjct: 159 TTEGE-TASNEGADSDEDEGSMPSQESSSG 187
>AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B
protein.
Length = 1311
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 290 SSDGEVTVTNDGSDNSQDDGRRASDWKASG 379
+++GE T +N+G+D+ +D+G S +SG
Sbjct: 282 TTEGE-TASNEGADSDEDEGSMPSQESSSG 310
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 290 SSDGEVTVTNDGSDNSQDDGRRASDWKASG 379
+++GE T +N+G+D+ +D+G S +SG
Sbjct: 282 TTEGE-TASNEGADSDEDEGSMPSQESSSG 310
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 290 SSDGEVTVTNDGSDNSQDDGRRASDWKASG 379
+++GE T +N+G+D+ +D+G S +SG
Sbjct: 282 TTEGE-TASNEGADSDEDEGSMPSQESSSG 310
>AF130443-1|AAD28468.1| 956|Caenorhabditis elegans EAG K+ channel
EGL-2 protein.
Length = 956
Score = 27.1 bits (57), Expect = 5.6
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +2
Query: 35 IAKFSNFKSIFI*CFLSDYILKMAMFPGAVAFDEYGRPFIIIKDQEKQNRLTGIDAL 205
I +S+FK+I+ L+ M P +AF RPF +I +E N GID++
Sbjct: 209 ILHYSSFKTIWDWSILALTFYTAFMVPFNIAFKNSLRPFYLISSRE--NPGGGIDSV 263
>AF036695-1|AAB88348.2| 956|Caenorhabditis elegans Egg laying
defective protein 2 protein.
Length = 956
Score = 27.1 bits (57), Expect = 5.6
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +2
Query: 35 IAKFSNFKSIFI*CFLSDYILKMAMFPGAVAFDEYGRPFIIIKDQEKQNRLTGIDAL 205
I +S+FK+I+ L+ M P +AF RPF +I +E N GID++
Sbjct: 209 ILHYSSFKTIWDWSILALTFYTAFMVPFNIAFKNSLRPFYLISSRE--NPGGGIDSV 263
>AB206670-1|BAD97389.1| 1147|Caenorhabditis elegans SAX-7 SHORTFORM
protein.
Length = 1147
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 314 TNDGSDNSQDDGRRASDWKASGTASRQS 397
++D S++ +DD +R WK S RQS
Sbjct: 727 SDDSSEDDEDDEKRKFRWKRSIRVKRQS 754
>AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFORM
protein.
Length = 1331
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 314 TNDGSDNSQDDGRRASDWKASGTASRQS 397
++D S++ +DD +R WK S RQS
Sbjct: 911 SDDSSEDDEDDEKRKFRWKRSIRVKRQS 938
>U41263-7|AAC24431.1| 462|Caenorhabditis elegans Hypothetical
protein T19D12.9 protein.
Length = 462
Score = 26.6 bits (56), Expect = 7.4
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -1
Query: 418 SPISSILTLAGSCTRSFPI*CSTSIILRIVASVICHSHLAIR 293
SPI+ I T + F I +SIIL V+ V+C S L R
Sbjct: 153 SPIAEISTYVAFLSAGFQI---SSIILMPVSGVLCESQLGWR 191
>U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated
protein 10, isoform b protein.
Length = 1371
Score = 26.6 bits (56), Expect = 7.4
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -3
Query: 131 QRPPLQGTWPFSKYNHLEN 75
++P L+ T P +KYNH+E+
Sbjct: 356 RQPSLEQTTPMNKYNHVED 374
>U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated
protein 10, isoform a protein.
Length = 1563
Score = 26.6 bits (56), Expect = 7.4
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -3
Query: 131 QRPPLQGTWPFSKYNHLEN 75
++P L+ T P +KYNH+E+
Sbjct: 356 RQPSLEQTTPMNKYNHVED 374
>AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interacting
molecule UNC-10 protein.
Length = 1563
Score = 26.6 bits (56), Expect = 7.4
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -3
Query: 131 QRPPLQGTWPFSKYNHLEN 75
++P L+ T P +KYNH+E+
Sbjct: 356 RQPSLEQTTPMNKYNHVED 374
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
C10C6.1 protein.
Length = 1565
Score = 26.2 bits (55), Expect = 9.8
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = +2
Query: 248 RTSLGPRG----LDKLMVSSDGEVTVTNDGSDNSQ-DDGRRAS 361
R+S+ RG L K +S +GE V+ G D+ DD R ++
Sbjct: 1012 RSSIAERGSRSPLPKFSISCEGEAGVSRSGDDHDDLDDSRNST 1054
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 26.2 bits (55), Expect = 9.8
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = +2
Query: 248 RTSLGPRG----LDKLMVSSDGEVTVTNDGSDNSQ-DDGRRAS 361
R+S+ RG L K +S +GE V+ G D+ DD R ++
Sbjct: 1012 RSSIAERGSRSPLPKFSISCEGEAGVSRSGDDHDDLDDSRNST 1054
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,321,436
Number of Sequences: 27780
Number of extensions: 208951
Number of successful extensions: 571
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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