Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_G24
(576 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0278 - 16693580-16693591,16693592-16694476 28 6.1
12_01_0977 - 9900073-9900521,9900594-9900698,9900770-9900959,990... 28 6.1
12_01_0631 - 5234452-5234468,5234536-5234839,5234926-5235810 28 6.1
10_08_0231 - 16045293-16045309,16045377-16045677,16045764-16046648 28 6.1
09_03_0025 - 11665969-11666417,11666490-11666594,11666667-116668... 28 6.1
08_02_1029 - 23768228-23768548,23768635-23769519 28 6.1
08_02_0542 + 18374810-18375694,18375781-18376098 28 6.1
08_01_0761 - 7296069-7296169,7296516-7296703,7297016-7297026,729... 28 6.1
07_03_0423 + 18035688-18036572,18036659-18036978,18052618-180527... 28 6.1
07_01_1077 - 9687394-9687515,9696615-9696733,9696815-9697104,969... 28 6.1
06_03_0573 + 22407489-22408373,22408460-22408795 28 6.1
06_03_0121 + 16864735-16865619,16865706-16866026 28 6.1
05_04_0117 + 18136189-18137073,18137160-18137516 28 6.1
04_04_1671 + 35231546-35232430,35232517-35232837 28 6.1
04_03_0155 - 11960973-11961896 28 6.1
04_01_0451 + 5845249-5846133,5846220-5846509,5855590-5856060,585... 28 6.1
03_01_0166 + 1362254-1363138,1363225-1363545 28 6.1
01_01_0649 - 4939939-4940835 28 6.1
12_01_1003 - 10164751-10165647 27 8.1
08_02_0214 + 14355436-14355473,14355584-14355596,14355695-143558... 27 8.1
08_01_0831 + 8086470-8087354,8087441-8087730,8096373-8096412,809... 27 8.1
05_03_0148 + 8922959-8923855 27 8.1
02_04_0620 - 24491055-24491710,24491794-24491986,24492165-244939... 27 8.1
>12_02_0278 - 16693580-16693591,16693592-16694476
Length = 298
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 456 FKLNKHRLYSAWALALVAPVSHQYP 530
FK+ K R+Y ++ A+V SHQ P
Sbjct: 259 FKIMKERMYKIFSNAIVVSYSHQLP 283
>12_01_0977 -
9900073-9900521,9900594-9900698,9900770-9900959,
9901035-9901093,9901297-9901688,9901770-9902059,
9902146-9903030
Length = 789
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 456 FKLNKHRLYSAWALALVAPVSHQYP 530
FK+ K R+Y ++ A+V SHQ P
Sbjct: 259 FKIMKERMYKIFSNAIVVSYSHQLP 283
>12_01_0631 - 5234452-5234468,5234536-5234839,5234926-5235810
Length = 401
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 456 FKLNKHRLYSAWALALVAPVSHQYP 530
FK+ K R+Y ++ A+V SHQ P
Sbjct: 259 FKIMKERMYKIFSNAIVVSYSHQLP 283
>10_08_0231 - 16045293-16045309,16045377-16045677,16045764-16046648
Length = 400
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 456 FKLNKHRLYSAWALALVAPVSHQYP 530
FK+ K R+Y ++ A+V SHQ P
Sbjct: 259 FKIMKERMYKIFSNAIVVSYSHQLP 283
>09_03_0025 -
11665969-11666417,11666490-11666594,11666667-11666856,
11666933-11667120,11667240-11667571,11667654-11667940,
11668027-11668911
Length = 811
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 456 FKLNKHRLYSAWALALVAPVSHQYP 530
FK+ K R+Y ++ A+V SHQ P
Sbjct: 259 FKIMKERMYKIFSNAIVVSYSHQLP 283
>08_02_1029 - 23768228-23768548,23768635-23769519
Length = 401
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 456 FKLNKHRLYSAWALALVAPVSHQYP 530
FK+ K R+Y ++ A+V SHQ P
Sbjct: 259 FKIMKERMYKIFSNAIVVSYSHQLP 283
>08_02_0542 + 18374810-18375694,18375781-18376098
Length = 400
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 456 FKLNKHRLYSAWALALVAPVSHQYP 530
FK+ K R+Y ++ A+V SHQ P
Sbjct: 259 FKIMKERMYKIFSNAIVVSYSHQLP 283
>08_01_0761 -
7296069-7296169,7296516-7296703,7297016-7297026,
7297521-7297811,7298623-7298665,7309343-7309632,
7309719-7310603
Length = 602
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 456 FKLNKHRLYSAWALALVAPVSHQYP 530
FK+ K R+Y ++ A+V SHQ P
Sbjct: 259 FKIMKERMYKIFSNAIVVSYSHQLP 283
>07_03_0423 +
18035688-18036572,18036659-18036978,18052618-18052724,
18053001-18053104,18054129-18054328,18054422-18054522,
18054695-18054841,18055007-18055166,18055287-18055368,
18056070-18056336,18056846-18056973,18057513-18057672
Length = 886
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 456 FKLNKHRLYSAWALALVAPVSHQYP 530
FK+ K R+Y ++ A+V SHQ P
Sbjct: 259 FKIMKERMYKIFSNAIVVSYSHQLP 283
>07_01_1077 -
9687394-9687515,9696615-9696733,9696815-9697104,
9697191-9698075
Length = 471
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 456 FKLNKHRLYSAWALALVAPVSHQYP 530
FK+ K R+Y ++ A+V SHQ P
Sbjct: 259 FKIMKERMYKIFSNAIVVSYSHQLP 283
>06_03_0573 + 22407489-22408373,22408460-22408795
Length = 406
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 456 FKLNKHRLYSAWALALVAPVSHQYP 530
FK+ K R+Y ++ A+V SHQ P
Sbjct: 259 FKIMKERMYKIFSNAIVVSYSHQLP 283
>06_03_0121 + 16864735-16865619,16865706-16866026
Length = 401
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 456 FKLNKHRLYSAWALALVAPVSHQYP 530
FK+ K R+Y ++ A+V SHQ P
Sbjct: 259 FKIMKERMYKIFSNAIVVSYSHQLP 283
>05_04_0117 + 18136189-18137073,18137160-18137516
Length = 413
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 456 FKLNKHRLYSAWALALVAPVSHQYP 530
FK+ K R+Y ++ A+V SHQ P
Sbjct: 259 FKIMKERMYKIFSNAIVVSYSHQLP 283
>04_04_1671 + 35231546-35232430,35232517-35232837
Length = 401
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 456 FKLNKHRLYSAWALALVAPVSHQYP 530
FK+ K R+Y ++ A+V SHQ P
Sbjct: 259 FKIMKERMYKIFSNAIVVSYSHQLP 283
>04_03_0155 - 11960973-11961896
Length = 307
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 456 FKLNKHRLYSAWALALVAPVSHQYP 530
FK+ K R+Y ++ A+V SHQ P
Sbjct: 259 FKIMKERMYKIFSNAIVVSYSHQLP 283
>04_01_0451 +
5845249-5846133,5846220-5846509,5855590-5856060,
5856898-5857063,5857100-5857498,5858031-5858075
Length = 751
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 456 FKLNKHRLYSAWALALVAPVSHQYP 530
FK+ K R+Y ++ A+V SHQ P
Sbjct: 259 FKIMKERMYKIFSNAIVVSYSHQLP 283
>03_01_0166 + 1362254-1363138,1363225-1363545
Length = 401
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 456 FKLNKHRLYSAWALALVAPVSHQYP 530
FK+ K R+Y ++ A+V SHQ P
Sbjct: 259 FKIMKERMYKIFSNAIVVSYSHQLP 283
>01_01_0649 - 4939939-4940835
Length = 298
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 456 FKLNKHRLYSAWALALVAPVSHQYP 530
FK+ K R+Y ++ A+V SHQ P
Sbjct: 259 FKIMKERMYKIFSNAIVVSYSHQLP 283
>12_01_1003 - 10164751-10165647
Length = 298
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 456 FKLNKHRLYSAWALALVAPVSHQYP 530
FK+ K R+Y ++ A+V SHQ P
Sbjct: 259 FKIIKERMYKIFSNAIVVSYSHQLP 283
>08_02_0214 +
14355436-14355473,14355584-14355596,14355695-14355804,
14355975-14356072,14356167-14356331,14356553-14356664,
14357217-14357751,14357868-14357965,14358084-14359203
Length = 762
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 3 TRLLKDFRVVQTTWWYKV-LGANWKHPYGPDSDLSE 107
+RL +++T W Y V LG+ HPYGPD+ E
Sbjct: 4 SRLFLAAALLETNWPYIVYLGS---HPYGPDASAEE 36
>08_01_0831 +
8086470-8087354,8087441-8087730,8096373-8096412,
8096878-8096957,8099643-8099733,8099989-8100052,
8100553-8100818
Length = 571
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 456 FKLNKHRLYSAWALALVAPVSHQYP 530
FK+ K R+Y ++ A+V SHQ P
Sbjct: 259 FKIMKERMYKIFSNAIVVNYSHQLP 283
>05_03_0148 + 8922959-8923855
Length = 298
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 456 FKLNKHRLYSAWALALVAPVSHQYP 530
FK+ K R+Y ++ A+V SHQ P
Sbjct: 259 FKIMKERMYKNFSNAIVVSYSHQLP 283
>02_04_0620 -
24491055-24491710,24491794-24491986,24492165-24493991,
24494245-24494304,24494808-24494916,24496393-24496522,
24498740-24498848
Length = 1027
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 159 CKWRNGRLPTEAEWEAACRGGHQDTKYPWG 248
C R LPT+A++ ACR ++ + P G
Sbjct: 599 CYDRENELPTQAKYATACRKDEKNGERPMG 628
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,258,586
Number of Sequences: 37544
Number of extensions: 463324
Number of successful extensions: 1425
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1425
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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