Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_G24
(576 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q... 38 0.005
AF068709-15|AAC19246.2| 317|Caenorhabditis elegans Serpentine r... 30 1.4
U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z99267-1|CAB16465.1| 732|Caenorhabditis elegans C33A12.12 protein. 28 4.1
Z68493-14|CAA92801.1| 732|Caenorhabditis elegans Hypothetical p... 28 4.1
AL033537-1|CAA22147.1| 732|Caenorhabditis elegans Hypothetical ... 28 4.1
Z68314-6|CAA92657.2| 446|Caenorhabditis elegans Hypothetical pr... 28 5.5
U55855-3|AAA98019.2| 893|Caenorhabditis elegans Ubiquitin-like ... 28 5.5
Z83234-5|CAB70171.2| 640|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z30317-4|CAB54306.1| 378|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF098504-4|AAC67411.1| 339|Caenorhabditis elegans Hypothetical ... 27 9.5
AF036688-8|AAB88314.2| 482|Caenorhabditis elegans Hypothetical ... 27 9.5
>AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 85
protein.
Length = 2203
Score = 37.9 bits (84), Expect = 0.005
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Frame = -1
Query: 393 QPYCAVQNHFVETNALDLYRYIHLLLSCGVEMFLAKYLPYVFFLGIT----YHPRDTWYL 226
Q + N TN D+ + +L +++ KY Y+F IT P D
Sbjct: 356 QMVATISNILNATNIDDIISSVTTVLKALLKLQTIKYFTYLFSSSITRMDKLRPDDKETN 415
Query: 225 DALLYKLPPIQPQLVIYHFSIYNTFVHHSMKYV*QDDLVI 106
D L KLPPI +V Y+ S + H+ M+ + +D+++
Sbjct: 416 DLFLDKLPPIIQAVVNYNTSALDVDSHNDMELLENEDVMM 455
>AF068709-15|AAC19246.2| 317|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 62 protein.
Length = 317
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/76 (23%), Positives = 32/76 (42%)
Frame = -1
Query: 396 YQPYCAVQNHFVETNALDLYRYIHLLLSCGVEMFLAKYLPYVFFLGITYHPRDTWYLDAL 217
Y PY HF L ++R +L E F +++ VF + + + D
Sbjct: 104 YLPYWFFHMHFWTAALLTIHRLTSILFPYQYENFWSRWNLLVFLVVCFFSHLPKYLWDGF 163
Query: 216 LYKLPPIQPQLVIYHF 169
LY++ + QL+ +F
Sbjct: 164 LYEVYIVNGQLICINF 179
>U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical
protein C56E6.6 protein.
Length = 1102
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 273 HMANIWQGTFPHHNSAKDGYIGTNPVHLFPQNDFGLHNM 389
++ N+W+GTF + S I N + Q FG +N+
Sbjct: 641 YIRNLWKGTFQYQESLHTLDISFNDILFLHQGTFGKNNI 679
>Z99267-1|CAB16465.1| 732|Caenorhabditis elegans C33A12.12 protein.
Length = 732
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 28 LYKRHGGIKCLGQTGNIHMGQIRIYPNYKII--LLHIFHGMMH 150
L RH GIKCL Q H ++R + ++++ LL+ + + H
Sbjct: 364 LESRHNGIKCLTQISLHHYKKLRSFEIFRLLDYLLNYCNELQH 406
>Z68493-14|CAA92801.1| 732|Caenorhabditis elegans Hypothetical
protein C33A12.12 protein.
Length = 732
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 28 LYKRHGGIKCLGQTGNIHMGQIRIYPNYKII--LLHIFHGMMH 150
L RH GIKCL Q H ++R + ++++ LL+ + + H
Sbjct: 364 LESRHNGIKCLTQISLHHYKKLRSFEIFRLLDYLLNYCNELQH 406
>AL033537-1|CAA22147.1| 732|Caenorhabditis elegans Hypothetical
protein C33A12.12 protein.
Length = 732
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 28 LYKRHGGIKCLGQTGNIHMGQIRIYPNYKII--LLHIFHGMMH 150
L RH GIKCL Q H ++R + ++++ LL+ + + H
Sbjct: 364 LESRHNGIKCLTQISLHHYKKLRSFEIFRLLDYLLNYCNELQH 406
>Z68314-6|CAA92657.2| 446|Caenorhabditis elegans Hypothetical
protein F07H5.9a protein.
Length = 446
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/71 (16%), Positives = 35/71 (49%)
Frame = -1
Query: 291 AKYLPYVFFLGITYHPRDTWYLDALLYKLPPIQPQLVIYHFSIYNTFVHHSMKYV*QDDL 112
A ++ ++F + +TW+ D ++ + Q+ +Y + ++N+ ++ + + + L
Sbjct: 224 ALFIEQIYF-NESLRKENTWFNDDFYSQIVAVNDQIYMYQYGVFNSTINMNNMNIGLELL 282
Query: 111 VIRINPNLAHM 79
+R P + M
Sbjct: 283 KVRSGPLMNDM 293
>U55855-3|AAA98019.2| 893|Caenorhabditis elegans Ubiquitin-like
protease protein 2 protein.
Length = 893
Score = 27.9 bits (59), Expect = 5.5
Identities = 26/87 (29%), Positives = 35/87 (40%)
Frame = +3
Query: 126 THISWNDARMYCKWRNGRLPTEAEWEAACRGGHQDTKYPWGDKLFPERKHMANIWQGTFP 305
THIS ND + L EA H + W ++ P H A+ Q
Sbjct: 390 THISGNDGVEDLTEKISHLGEEAYNIDMANALHAFSDN-WHYEIHPNTVHNASFEQLHIG 448
Query: 306 HHNSAKDGYIGTNPVHLFPQNDFGLHN 386
NS+ G IG NP+ +PQ+ F N
Sbjct: 449 DGNSSI-GTIGFNPLEPYPQSSFPQSN 474
>Z83234-5|CAB70171.2| 640|Caenorhabditis elegans Hypothetical
protein K09E4.2 protein.
Length = 640
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Frame = -2
Query: 389 HIVQSKIILWKQMHW---ICTDISIFC*VVV---WKCSLPNICHMFSFWE*LIT 246
H+ I W+Q W + + + V W +L ++CH+ FW ++T
Sbjct: 362 HVASVSTIPWRQFLWKVPLLAAVELSWNVYPSTWWSSALLHVCHVIIFWHLIVT 415
>Z30317-4|CAB54306.1| 378|Caenorhabditis elegans Hypothetical
protein T16G12.8 protein.
Length = 378
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 307 TTTQQKMDISVQIQCICFHKMILDCTIWLVMFGSGLRIYGLTKM 438
T +KMD+ V+ I +D +W MF G + +TK+
Sbjct: 195 TVAYEKMDVGVENVSIFRRLQKVDFRVWFFMFVIGSIAFDVTKL 238
>AF098504-4|AAC67411.1| 339|Caenorhabditis elegans Hypothetical
protein T27C10.3 protein.
Length = 339
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = -1
Query: 372 NHFVETNALDLYRYIHLLLSCG---VEMFLAKYLPYVFFLGITYHPRDTWYLDALLYKL 205
N+F++ N + +H L++C ++ K+L +F Y R W + KL
Sbjct: 131 NNFIKNNLPRFMQTLHKLIACSNFFIQAKSFKFLNELFTAQTNYETRSLWMAEPAFIKL 189
>AF036688-8|AAB88314.2| 482|Caenorhabditis elegans Hypothetical
protein C24D10.1 protein.
Length = 482
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/49 (24%), Positives = 20/49 (40%)
Frame = +3
Query: 258 FPERKHMANIWQGTFPHHNSAKDGYIGTNPVHLFPQNDFGLHNMAGNVW 404
FP + W+ F ++ D +G P+ FP+ N G +W
Sbjct: 251 FPVKDTEETFWKAVFDKRITSIDVLVGDEPIEFFPKKAEDYKNY-GQMW 298
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,423,451
Number of Sequences: 27780
Number of extensions: 405533
Number of successful extensions: 1152
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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