Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_G23
         (472 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         22   3.3  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   4.3  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   4.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   4.3  

>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 379 TPILYYLMGKLGEFSASVKYSESGKR 302
           T  L  L+G  G+  ASV ++ES  R
Sbjct: 106 TSQLIELLGDAGKLLASVHFAESQSR 131


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 10/41 (24%), Positives = 18/41 (43%)
 Frame = -3

Query: 230 HRSIIWLRQIAQLSTTISQAHNATAFHFFTSNLFLSPLPLL 108
           H +I W +Q    +   + AH  T   F    ++  PL ++
Sbjct: 195 HPNITWYQQCVTYNVFPTYAHELTYLLFGMVMMYALPLAVI 235


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 10/41 (24%), Positives = 18/41 (43%)
 Frame = -3

Query: 230 HRSIIWLRQIAQLSTTISQAHNATAFHFFTSNLFLSPLPLL 108
           H +I W +Q    +   + AH  T   F    ++  PL ++
Sbjct: 195 HPNITWYQQCVTYNVFPTYAHELTYLLFGMVMMYALPLAVI 235


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 242 KLTKHLLQVKSAQSLGECVITLSTFTVFHAG*KLAKF 352
           KL    L + SAQ+L E  ++ ++ +    G +LA+F
Sbjct: 357 KLPLTSLSLASAQTLSELDLSWNSISSLSHGGQLARF 393


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,720
Number of Sequences: 336
Number of extensions: 2935
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10931752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)