BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_G23
(472 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles ... 29 0.11
DQ437579-1|ABD96049.1| 575|Anopheles gambiae short neuropeptide... 22 9.4
>M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 442
Score = 28.7 bits (61), Expect = 0.11
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +1
Query: 199 AICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHC 321
++C + C C A SA S C GVC H HC
Sbjct: 27 SVCAVSFVMQCSTCNAPTDSANSVSCA---GVCGSKHHTHC 64
>DQ437579-1|ABD96049.1| 575|Anopheles gambiae short neuropeptide F
receptor protein.
Length = 575
Score = 22.2 bits (45), Expect = 9.4
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -2
Query: 165 CNCIPLFYFKSLFVSLTTAR*SHLDFFFIDIH 70
C+ +PL S+++S T +D FF+ I+
Sbjct: 168 CHTVPLAQGCSVYISTLTLTSIAIDRFFVIIY 199
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 533,337
Number of Sequences: 2352
Number of extensions: 11348
Number of successful extensions: 17
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41245467
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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