Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_G21
(590 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 322 3e-87
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 300 2e-80
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 256 3e-67
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 215 5e-55
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 208 1e-52
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 197 2e-49
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 191 1e-47
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 182 4e-45
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 175 6e-43
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 174 1e-42
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 155 1e-36
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 128 1e-28
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 103 3e-21
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 98 2e-19
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 88 1e-16
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 85 1e-15
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 78 1e-13
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 71 2e-11
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 46 3e-11
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 63 5e-09
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 58 2e-07
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 56 6e-07
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 51 2e-05
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 51 2e-05
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 45 0.002
UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum... 36 0.039
UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2; Thermo... 38 0.23
UniRef50_Q38FY2 Cluster: Protein kinase, putative; n=1; Trypanos... 36 0.71
UniRef50_Q7RWY4 Cluster: Putative uncharacterized protein NCU087... 36 0.71
UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin oxid... 35 1.6
UniRef50_O07653 Cluster: Cellulase B; n=3; Gammaproteobacteria|R... 34 2.9
UniRef50_Q5BX30 Cluster: SJCHGC05145 protein; n=1; Schistosoma j... 33 3.8
UniRef50_UPI0000F2BEF5 Cluster: PREDICTED: similar to Rho guanin... 33 5.0
UniRef50_Q7S8Z4 Cluster: Predicted protein; n=2; Pezizomycotina|... 33 6.6
UniRef50_Q7R2S3 Cluster: GLP_291_73636_75723; n=2; Giardia intes... 32 8.7
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 322 bits (792), Expect = 3e-87
Identities = 146/178 (82%), Positives = 159/178 (89%)
Frame = +3
Query: 57 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 236
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 237 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 416
T Q+AY+RIEGD +VCAAYSHELP+YGI+VGLTNYAAAYCTG DSLY
Sbjct: 61 TVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYA 120
Query: 417 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIK 590
G TEVTG+E+NVEPVD+GPGAFRC+LDVGLARTTTGARVFGAMKGAVDGGLN+PHS+K
Sbjct: 121 GCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVK 178
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 300 bits (736), Expect = 2e-80
Identities = 133/178 (74%), Positives = 151/178 (84%)
Frame = +3
Query: 57 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 236
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 237 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 416
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 417 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIK 590
G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS K
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTK 178
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 256 bits (627), Expect = 3e-67
Identities = 118/176 (67%), Positives = 137/176 (77%)
Frame = +3
Query: 57 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 236
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 237 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 416
Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY TG DS Y
Sbjct: 61 VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYK 120
Query: 417 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 584
G E+TG++YNVE + F+ LD+GLARTTTG+++F MKG DGG+NVPHS
Sbjct: 121 GHEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHS 175
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 215 bits (526), Expect = 5e-55
Identities = 100/175 (57%), Positives = 121/175 (69%), Gaps = 2/175 (1%)
Frame = +3
Query: 72 VVKNKQYFKRYQVKFKRRREG--KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 245
V K Y RYQVKF RRR G KTDY AR+RL+ QDKNKYN+PKYR +VR +N+DV CQ
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQ 72
Query: 246 VAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGAT 425
V Y+ + GD +CAAYSHELP+YG+K GLTNYAA Y TG Y G T
Sbjct: 73 VVYATLSGDVTICAAYSHELPKYGMKAGLTNYAATYATGLLCARRLLTKYGLADAYEGKT 132
Query: 426 EVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIK 590
E G++Y+VE D F+C+LD GL RT+TGARVF A+KGAVDGGL++PH+ K
Sbjct: 133 EDLGEDYHVEQGDEEARPFKCFLDTGLVRTSTGARVFAALKGAVDGGLDIPHNEK 187
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 208 bits (507), Expect = 1e-52
Identities = 100/182 (54%), Positives = 127/182 (69%), Gaps = 6/182 (3%)
Frame = +3
Query: 54 KMGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKD 233
+M FVKVVKNK YFKR+QVK++RRREGKTDY+AR+++V+QDK K+ +PKYRL+VR++NKD
Sbjct: 23 EMPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNKD 82
Query: 234 VTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLY 413
+ Q+ ++I GD +V AAY+HELP +GI+ GLTNYAAAY TG +
Sbjct: 83 IIAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYAAAYATGLLLARRTLAKLGIADKF 142
Query: 414 TGATEVTGDEYNVEPVDNGPG------AFRCYLDVGLARTTTGARVFGAMKGAVDGGLNV 575
GA E G V + G F+ LDVGLARTTTGARVFG +KGAVDGG+ V
Sbjct: 143 QGAKEADGSYSAVRTKKDDEGDDEERFPFKAILDVGLARTTTGARVFGVLKGAVDGGMAV 202
Query: 576 PH 581
PH
Sbjct: 203 PH 204
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 197 bits (480), Expect = 2e-49
Identities = 98/178 (55%), Positives = 118/178 (66%), Gaps = 3/178 (1%)
Frame = +3
Query: 57 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 236
M +VKVVKNK YFKRYQVK++RRREGKTDY ARK L++QDKNKYN K R IVR +N +
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQI 60
Query: 237 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 416
CQ+A S IEGD I+ A S EL RYGI VGL NYAAAY TG D+ +
Sbjct: 61 ICQIASSHIEGDKILSEAKSKELIRYGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFI 120
Query: 417 GATEVTGD---EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPH 581
G +VT + E + + + +LDVG+ RTTTG RVF A+KGA DGGLN+PH
Sbjct: 121 GVEKVTSESVAEDGDKEEEGDRKPIKAFLDVGITRTTTGNRVFAALKGACDGGLNIPH 178
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 191 bits (465), Expect = 1e-47
Identities = 92/176 (52%), Positives = 117/176 (66%)
Frame = +3
Query: 57 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 236
M FVK+VK YFKR+Q KF+RRREGKTDYYAR RL+VQDK+KYN+PKYR +VR +N +
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKI 60
Query: 237 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 416
CQV Y+ ++GD +V AA S EL R+G+ GLTNYAAAY TG D Y
Sbjct: 61 ICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYAAAYATGLLLARRTLKTLKMDKFYE 120
Query: 417 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 584
G + G N++ P F LD+GL R+T G RVF A+KGA DGG+++PH+
Sbjct: 121 GNKTIDG---NLKTQRERP--FFAVLDIGLVRSTLGNRVFAALKGAADGGIHIPHN 171
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 182 bits (444), Expect = 4e-45
Identities = 80/89 (89%), Positives = 87/89 (97%)
Frame = +3
Query: 57 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 236
MGFVKVVKNKQYFKR+QVKFKRRREGKTDYYARKRL+VQDKNKYNTPKYRLIVR SN+D+
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDI 60
Query: 237 TCQVAYSRIEGDHIVCAAYSHELPRYGIK 323
TCQ+AYSRIEGD I+CAAYSHELPRYG+K
Sbjct: 61 TCQIAYSRIEGDKILCAAYSHELPRYGVK 89
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 175 bits (426), Expect = 6e-43
Identities = 77/159 (48%), Positives = 106/159 (66%)
Frame = +3
Query: 108 VKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCA 287
++ K+ +G TDYYARKRL++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CA
Sbjct: 307 IQIKQNYQGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCA 366
Query: 288 AYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTGDEYNVEPVDN 467
A S+EL R+G+ GL +YAAAY TG D++Y G T+V G +NV+
Sbjct: 367 ADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDEDQK 426
Query: 468 GPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 584
F+ LD GL RTTTG RVFG +KGA DGG+N+PHS
Sbjct: 427 EKKPFKAILDAGLVRTTTGNRVFGVLKGACDGGINIPHS 465
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +3
Query: 57 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYY 149
+GFVKV+K K YFKR+Q K++RRR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 174 bits (423), Expect = 1e-42
Identities = 87/173 (50%), Positives = 112/173 (64%)
Frame = +3
Query: 69 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQV 248
K+VKN YF R+Q KF+RRRE KTDY R +L+ QDK KY KYRL+ R++N V Q+
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQI 63
Query: 249 AYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATE 428
+ + GD VC A S ELP+YGIK+GL+NY AAY TG ++ TE
Sbjct: 64 VVAELTGDKTVCQALSTELPKYGIKLGLSNYPAAYATGLLVARRFLTQMKLADVF--KTE 121
Query: 429 VTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSI 587
+T +EY + + P F+ LDVGLARTTTGA+VF MKGAVDGGL +PH++
Sbjct: 122 IT-EEYLNDEENRRP--FKVILDVGLARTTTGAKVFAVMKGAVDGGLFIPHNV 171
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 155 bits (375), Expect = 1e-36
Identities = 77/167 (46%), Positives = 102/167 (61%)
Frame = +3
Query: 84 KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 263
+ Y K +QVK +RRREGKTDY R ++ QD N + K+RL+VR++ V CQ+ + +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYM 63
Query: 264 EGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTGDE 443
+GD ++ A S EL RYGI G TNY+AAY TG D +Y E+ G
Sbjct: 64 DGDRVMVYADSRELERYGINFGATNYSAAYATGFLIGRRALTAMSLDEVYR-PKEIDGTY 122
Query: 444 YNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 584
+ +D A R +LD+GLAR+T GARVFGA+KGA D GLNVPHS
Sbjct: 123 SVTKDIDGEKKAPRVFLDIGLARSTRGARVFGALKGASDAGLNVPHS 169
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 128 bits (308), Expect = 1e-28
Identities = 64/124 (51%), Positives = 78/124 (62%)
Frame = +3
Query: 219 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXX 398
++NK V CQV S + GD + +A S EL YG+KVGLTNYAAAYCTG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLK 63
Query: 399 XDSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVP 578
DS + G EV G+ Y+VE +N F+ LDVG+ TTG RVFGA+KGA DGGL+VP
Sbjct: 64 LDSQFVGKLEVDGEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHVP 123
Query: 579 HSIK 590
HS K
Sbjct: 124 HSEK 127
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 103 bits (247), Expect = 3e-21
Identities = 46/72 (63%), Positives = 55/72 (76%)
Frame = +3
Query: 57 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 236
+ FVK K + Y KR+QVKFKRRR GKTDY AR RL+ QDKNKYNTPKYR +VR +NKD+
Sbjct: 12 LAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 71
Query: 237 TCQVAYSRIEGD 272
T Q+ + I GD
Sbjct: 72 TAQIISASIAGD 83
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 97.9 bits (233), Expect = 2e-19
Identities = 54/168 (32%), Positives = 85/168 (50%)
Frame = +3
Query: 81 NKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSR 260
N Y R+++K +RRR GKTDY R +L+ QDK K+ K R+I+R S ++++ Q+ S
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSN 68
Query: 261 IEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTGD 440
++GD I+ ++Y L + K NY +Y G +
Sbjct: 69 VDGDFILLSSYLKNLSKLEYKNLTNNYPFSYLLGYYFGKDLIEKVK-----------QSE 117
Query: 441 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 584
YN + N +D+GL R T G + F +MKG+VD G+N+PH+
Sbjct: 118 TYNKK---NYSSKITAIIDIGLKRATIGNKSFASMKGSVDSGINIPHN 162
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 88.2 bits (209), Expect = 1e-16
Identities = 62/161 (38%), Positives = 82/161 (50%)
Frame = +3
Query: 99 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 278
RY V F+RR EGKTDYY R L+ TP R++VR +N+ + Q+ +EGD
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLLSS-----GTP--RMVVRKTNRQIIVQLVVPEVEGDST 58
Query: 279 VCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTGDEYNVEP 458
+ AAYS EL YG + + AAY TG + V+
Sbjct: 59 LVAAYSAELAGYGYEGSTASTPAAYLTGML-------------------------FAVKA 93
Query: 459 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPH 581
++ G G LD+GLAR GARVF A+KGAVD GL+VP+
Sbjct: 94 LNAGYG--EAILDIGLARAKPGARVFAALKGAVDAGLDVPY 132
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 85.0 bits (201), Expect = 1e-15
Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Frame = +3
Query: 207 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXX 386
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ G+KVGLTNYAAAYC G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIGLLLAHRLL 60
Query: 387 XXXXXDSLYTG-ATEVTGDEY---NVEPVDNG---PGAFRCY 491
D +Y G A TG++ EPVD G P + +C+
Sbjct: 61 NRFGMDKIYEGLARTTTGNKVFGALKEPVDCGLSIPHSTKCF 102
Score = 47.6 bits (108), Expect = 2e-04
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +3
Query: 501 GLARTTTGARVFGAMKGAVDGGLNVPHSIK 590
GLARTTTG +VFGA+K VD GL++PHS K
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTK 100
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 78.2 bits (184), Expect = 1e-13
Identities = 59/163 (36%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Frame = +3
Query: 99 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 278
RY+V +RRREGKT+YY R RLV + K R+ VR+SN+ + Q +RIEGD +
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRV 58
Query: 279 VCAAYSHEL-PRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTGDEYNVE 455
+ AA+S EL ++G K D T A +TG +
Sbjct: 59 IAAAHSRELIKKFGWK-------------------------GDGNNTCAAYLTGYLAGLR 93
Query: 456 PVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 584
++ G LDVGL + G+RVF A+KGA+D G+ +PHS
Sbjct: 94 ALEKG--VREAVLDVGLHKPVKGSRVFAALKGALDAGVEIPHS 134
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 71.3 bits (167), Expect = 2e-11
Identities = 54/162 (33%), Positives = 77/162 (47%)
Frame = +3
Query: 99 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 278
RY+V +RRRE +TDY+ R RL+ + K RL+ R SNK V Q+ GD
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNGDDT 58
Query: 279 VCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTGDEYNVEP 458
+ +A+S +L YG + N +AY TG L G + E VE
Sbjct: 59 LASAHSSDLAEYGWEAPTGNMPSAYLTG---------------LLAG---LRAQEAGVE- 99
Query: 459 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 584
LD+GL T G++VF +GA+D GL++PH+
Sbjct: 100 --------EAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 46.4 bits (105), Expect(2) = 3e-11
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +3
Query: 474 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPH 581
G LDVGLA T+G RVF A++G VD GL++PH
Sbjct: 100 GHSEAVLDVGLAAATSGNRVFAALRGMVDAGLDIPH 135
Score = 44.0 bits (99), Expect(2) = 3e-11
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +3
Query: 96 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDH 275
K +++FKRRR G+TDY R R++ R +VR+SN TCQ+ GD
Sbjct: 5 KNQRLRFKRRRTGETDYRRRMRML-------RGGATRAVVRVSNTQTTCQLINYDSTGDE 57
Query: 276 IVCAAYSHEL-PRYG--IKVGLTNYAAAYCTG 362
++ + L R+G + + A+Y TG
Sbjct: 58 VIISVTGKTLVDRFGWPLDASRKSVPASYLTG 89
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 62.9 bits (146), Expect = 5e-09
Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 1/163 (0%)
Frame = +3
Query: 99 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 278
RY+V F+RRREG+T+Y+ R +L++ ++ R++VR S ++V Q+ EGD
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGDIT 58
Query: 279 VCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTGDEYNVEP 458
+A S EL +YG Y A TG T A +TG + ++
Sbjct: 59 YSSAVSSELAKYG-------YTGA--TGN----------------TTAAYLTGLLFGLKS 93
Query: 459 VDNG-PGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 584
+ G G LD+GL ++ G+RV+ A+KG VD G +P S
Sbjct: 94 LQKGYEGGI---LDIGLQASSAGSRVYAALKGIVDSGFEIPCS 133
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 58.0 bits (134), Expect = 2e-07
Identities = 46/161 (28%), Positives = 74/161 (45%)
Frame = +3
Query: 102 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 281
Y+V+FKRRREGKT+Y R +LV DK R++VR+++ Q+ GD +
Sbjct: 7 YKVQFKRRREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGDETL 59
Query: 282 CAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTGDEYNVEPV 461
+A S L +G N +AAY TG Y + + Y+ +
Sbjct: 60 VSATSKNLKEFGWLGNGKNTSAAYLTG----------------YLFGKKALNEGYDETIL 103
Query: 462 DNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 584
D +G+ + G +++ +KGA+D GL +PH+
Sbjct: 104 D-----------IGVQPSIKGTKIYAVLKGALDAGLYIPHN 133
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 56.0 bits (129), Expect = 6e-07
Identities = 22/32 (68%), Positives = 30/32 (93%)
Frame = +3
Query: 105 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPK 200
+++F+R +EGKTDYYARKRL +QDKN+YNTP+
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEYNTPE 67
Score = 41.5 bits (93), Expect = 0.014
Identities = 23/67 (34%), Positives = 30/67 (44%)
Frame = +1
Query: 298 MNSHAMVSRWV*LTMLLPTALVCCWQEDCCRGSAWTVSTQVPLKSLVMNIMLNQLTMAQE 477
M MV + ML P AL CCW G AWT S + + + +N M LT++
Sbjct: 97 MKFQNMVXKLAXNIMLQPIALACCWPAGFXIGLAWTRSMKAKWRXMEVNTMWKALTVSLV 156
Query: 478 HSDVTWM 498
S WM
Sbjct: 157 PSLAIWM 163
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 51.2 bits (117), Expect = 2e-05
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 2/178 (1%)
Frame = +3
Query: 57 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYAR--KRLVVQDKNKYNTPKYRLIVRLSNK 230
M + K++KN YF ++ VK +R R+ T Y R + NK + K+R +N
Sbjct: 1 MIYQKIIKNASYFSKFVVKHRRNRKFLTKYGKSYDSRFLKSYTNK--SKKFRSYFTTTNT 58
Query: 231 DVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSL 410
+++ + +S + GD IV A S +L ++G+ N +Y G L
Sbjct: 59 NLSGVITFSSLSGDTIVAKASSMDLIKFGLIHSKKNLINSYFIGLLLAKRIITEF---KL 115
Query: 411 YTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 584
Y T F +D+G R R+ +KG +DGG+ +P S
Sbjct: 116 YKSHT------------------FLLTIDIGFKRLNEKGRINAFIKGLIDGGIQIPVS 155
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 51.2 bits (117), Expect = 2e-05
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +3
Query: 423 TEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 584
+ ++ +Y+VE NG F +L+VGL +T+ G VFG +K A+DG LN+PH+
Sbjct: 37 SRLSKSDYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHN 89
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 44.8 bits (101), Expect = 0.002
Identities = 48/157 (30%), Positives = 63/157 (40%), Gaps = 1/157 (0%)
Frame = +3
Query: 114 FKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVA-YSRIEGDHIVCAA 290
FKR+ G TDY R +L+ + + K R IVR++ K V QVA YS I GD I+
Sbjct: 6 FKRKEAGITDYSKRLKLL-KSREK------RFIVRITGKGVIAQVAEYSDI-GDRILFTV 57
Query: 291 YSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTGDEYNVEPVDNG 470
L +YG+ + N Y G Y E E N
Sbjct: 58 TDKTLAKYGVDLRGNNIQVCYLVG----------------YIAGIE---SEKN------- 91
Query: 471 PGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPH 581
G LD G + G R+ +KG D G+ VPH
Sbjct: 92 -GVESAVLDTGRRKFRKGGRIAACLKGFTDAGIEVPH 127
>UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L18 - Cenarchaeum
symbiosum
Length = 159
Score = 35.9 bits (79), Expect(2) = 0.039
Identities = 22/82 (26%), Positives = 43/82 (52%)
Frame = +3
Query: 117 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 296
+R RE KT+Y ++R ++ + + T V +SN++ Q+ +++GD ++ + +S
Sbjct: 8 RRLREEKTNY-KKRRSMLMGRRDFVT------VHISNENAQVQIHAPKMDGDVVIASGHS 60
Query: 297 HELPRYGIKVGLTNYAAAYCTG 362
L G K + A+Y TG
Sbjct: 61 RYLASKGWKGSRKSIPASYLTG 82
Score = 23.4 bits (48), Expect(2) = 0.039
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 474 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVP 578
GA + G R T R+ A+KG D G++VP
Sbjct: 93 GAKSAIMYTGTRRYTD--RISAALKGVSDAGVDVP 125
>UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L18P -
Picrophilus torridus
Length = 158
Score = 37.5 bits (83), Expect = 0.23
Identities = 25/82 (30%), Positives = 38/82 (46%)
Frame = +3
Query: 117 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 296
KRRREG TDY R RLV+ + R ++R + K + Q+ EGDH++ +
Sbjct: 8 KRRREGVTDYRKRYRLVISRET-------RAVIRQTRKGLIIQLVDYVPEGDHVLVTVTN 60
Query: 297 HELPRYGIKVGLTNYAAAYCTG 362
L + + + N Y G
Sbjct: 61 KTLKK-ALNIDGNNIQMYYLAG 81
>UniRef50_Q38FY2 Cluster: Protein kinase, putative; n=1; Trypanosoma
brucei|Rep: Protein kinase, putative - Trypanosoma
brucei
Length = 650
Score = 35.9 bits (79), Expect = 0.71
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 431 DFSGTCVETVQAEPLQQSSCQQQTSAVGS-SIVSQTH 324
D+SGT + PL+ + C Q S V + SIVSQTH
Sbjct: 452 DYSGTSASLITISPLRSTECMQSLSNVSTPSIVSQTH 488
>UniRef50_Q7RWY4 Cluster: Putative uncharacterized protein
NCU08779.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU08779.1 - Neurospora crassa
Length = 864
Score = 35.9 bits (79), Expect = 0.71
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = -2
Query: 568 KPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 437
K P+ AP AP+T AP AKP+S LN PG +TGS SS
Sbjct: 643 KAPAPAP--APSTAAPATTSAKPSS---LNIPGVSTTGSIASSS 681
>UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin
oxidoreductase; n=1; Prochlorococcus marinus|Rep:
15,16-dihydrobiliverdin:ferredoxin oxidoreductase -
Prochlorococcus marinus
Length = 241
Score = 34.7 bits (76), Expect = 1.6
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +3
Query: 57 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 236
+ F +V+ ++YF RY + + D+ ++K + + D NKY +P + L+ S D+
Sbjct: 102 LDFQPLVQEERYFCRYYKDLQILKNRFVDFNSQKTMKIYDSNKYFSP-WVLLYNGSFDDL 160
Query: 237 TCQVA 251
C +A
Sbjct: 161 QCSLA 165
>UniRef50_O07653 Cluster: Cellulase B; n=3; Gammaproteobacteria|Rep:
Cellulase B - Cellvibrio mixtus
Length = 622
Score = 33.9 bits (74), Expect = 2.9
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 464 VNWFNIIFITSDFSGTCVETVQAEP-LQQSSCQQQTSAVGSSIVSQTHLDTIAW 306
+NW + D SGT + T+QAE QQS QQ+T+ + ++D W
Sbjct: 477 INWLKVESTGGDNSGTVIATIQAEDHSQQSGTQQETTTDTGGGKNVGYIDAGDW 530
>UniRef50_Q5BX30 Cluster: SJCHGC05145 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05145 protein - Schistosoma
japonicum (Blood fluke)
Length = 230
Score = 33.5 bits (73), Expect = 3.8
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -2
Query: 565 PPSTAPFMAPNT-RAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAPV*RLSKPSL 389
PPS ++P R+P A + H+ P P G++ +SP S AP PS
Sbjct: 1 PPSVCSSVSPAPIRSPASAHAPTPTSFHVPHPYPSQHGASSLTSPAQSPAPP---QSPSN 57
Query: 388 CNNLLASN 365
N LL SN
Sbjct: 58 TNQLLRSN 65
>UniRef50_UPI0000F2BEF5 Cluster: PREDICTED: similar to Rho guanine
nucleotide exchange factor (GEF) 15,; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to Rho guanine
nucleotide exchange factor (GEF) 15, - Monodelphis
domestica
Length = 834
Score = 33.1 bits (72), Expect = 5.0
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = -2
Query: 559 STAPFMAPNTRAPVVVRAKPTSK*HLNA-PGPLSTGSTLY--SSPVTSVAPV*RLSKPSL 389
S P P+ + P V+R +P S+ +N+ PG L G + + P TS P+ S L
Sbjct: 5 SLPPATPPSQKPPRVIRPQPPSRLRINSPPGSLFNGPSHQEAAKPPTSPDPLVLTSLSPL 64
Query: 388 CNNLLASNR 362
C++L S +
Sbjct: 65 CDSLPTSTK 73
>UniRef50_Q7S8Z4 Cluster: Predicted protein; n=2;
Pezizomycotina|Rep: Predicted protein - Neurospora
crassa
Length = 315
Score = 32.7 bits (71), Expect = 6.6
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = -2
Query: 565 PPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAPV*RLSKPSLC 386
PP APF++ T P R S H P P S ST +PV+S PV ++ +C
Sbjct: 19 PPWRAPFLSHLTSLPPSSRTFVLSTLH---PLPPSLSSTSTPTPVSSTIPVLPRARTCVC 75
Query: 385 NNLLA 371
+L A
Sbjct: 76 RSLWA 80
>UniRef50_Q7R2S3 Cluster: GLP_291_73636_75723; n=2; Giardia
intestinalis|Rep: GLP_291_73636_75723 - Giardia lamblia
ATCC 50803
Length = 695
Score = 32.3 bits (70), Expect = 8.7
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -1
Query: 248 NLTGNIFIG*PYNQSVLWS--VVFVFILDNEAFASIVVSFSL 129
NL GN+F G P+ L ++ V LDN +FAS++ S +L
Sbjct: 240 NLQGNLFTGDPFTTETLKPNHLLQVLDLDNNSFASVITSSAL 281
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,660,159
Number of Sequences: 1657284
Number of extensions: 12418944
Number of successful extensions: 33528
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 32089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33482
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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