SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_G20
         (549 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              24   1.2  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    23   1.5  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    23   1.5  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    23   1.5  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    23   1.5  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    23   1.5  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    23   1.5  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    23   1.5  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    23   1.5  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    23   1.5  
DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    23   1.5  
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    23   1.5  
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    23   1.5  
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    23   1.5  
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    23   1.5  
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    23   1.5  
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    23   1.5  
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    23   1.5  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    23   1.5  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    23   1.5  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    23   2.0  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    23   2.0  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    23   2.0  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    22   4.7  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   4.7  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   4.7  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    21   8.2  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    21   8.2  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    21   8.2  
DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    21   8.2  
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    21   8.2  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    21   8.2  
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    21   8.2  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    21   8.2  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    21   8.2  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    21   8.2  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    21   8.2  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    21   8.2  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    21   8.2  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    21   8.2  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    21   8.2  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    21   8.2  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    21   8.2  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    21   8.2  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    21   8.2  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   8.2  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    21   8.2  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/34 (29%), Positives = 22/34 (64%)
 Frame = +2

Query: 92  SLTTNGWTLSARKPSRQSILKMRVSSSRLLRVTG 193
           S TT+G+ + A    +++IL + +S+ ++  +TG
Sbjct: 797 SQTTHGYDIYASSIDKENILFLDLSTGKVEMITG 830


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQVY 83
           YY +N+I+ + + + VY
Sbjct: 110 YYNINYIEQIPIPVPVY 126


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQVY 83
           YY +N+I+ + + + VY
Sbjct: 109 YYNINYIEQIPIPVPVY 125


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQVY 83
           YY +N+I+ + + + VY
Sbjct: 109 YYNINYIEQIPIPVPVY 125


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQVY 83
           YY +N+I+ + + + VY
Sbjct: 109 YYNINYIEQIPIPVPVY 125


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQVY 83
           YY +N+I+ + + + VY
Sbjct: 109 YYNINYIEQIPIPVPVY 125


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQVY 83
           YY +N+I+ + + + VY
Sbjct: 108 YYNINYIEQIPIPVPVY 124


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQVY 83
           YY +N+I+ + + + VY
Sbjct: 113 YYNINYIEQIPIPVPVY 129


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQVY 83
           YY +N+I+ + + + VY
Sbjct: 113 YYNINYIEQIPIPVPVY 129


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQVY 83
           YY +N+I+ + + + VY
Sbjct: 113 YYNINYIEQIPIPVPVY 129


>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQVY 83
           YY +N+I+ + + + VY
Sbjct: 110 YYNINYIEQIPIPVPVY 126


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQVY 83
           YY +N+I+ + + + VY
Sbjct: 110 YYNINYIEQIPIPVPVY 126


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQVY 83
           YY +N+I+ + + + VY
Sbjct: 110 YYNINYIEQIPIPVPVY 126


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQVY 83
           YY +N+I+ + + + VY
Sbjct: 110 YYNINYIEQIPIPVPVY 126


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQVY 83
           YY +N+I+ + + + VY
Sbjct: 110 YYNINYIEQIPIPVPVY 126


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQVY 83
           YY +N+I+ + + + VY
Sbjct: 110 YYNINYIEQIPIPVPVY 126


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQVY 83
           YY +N+I+ + + + VY
Sbjct: 110 YYNINYIEQIPIPVPVY 126


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQVY 83
           YY +N+I+ + + + VY
Sbjct: 110 YYNINYIEQIPIPVPVY 126


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQVY 83
           YY +N+I+ + + + VY
Sbjct: 343 YYNINYIEQIPIPVPVY 359


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQVY 83
           YY +N+I+ + + + VY
Sbjct: 343 YYNINYIEQIPIPVPVY 359


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 5/17 (29%), Positives = 12/17 (70%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQVY 83
           YY +N+I+ + + + +Y
Sbjct: 108 YYNINYIEQIPIPVPIY 124


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 5/17 (29%), Positives = 12/17 (70%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQVY 83
           YY +N+I+ + + + +Y
Sbjct: 108 YYNINYIEQIPIPVPIY 124


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 5/17 (29%), Positives = 12/17 (70%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQVY 83
           YY +N+I+ + + + +Y
Sbjct: 108 YYNINYIEQIPIPVPIY 124


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQV 80
           YY +N+I+ V V I V
Sbjct: 108 YYNINYIEQVPVPIPV 123


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 384 VLWASGIVRYYAGKADKI 437
           + WA G+ R+Y G  D I
Sbjct: 466 ISWAFGVNRFYDGIRDMI 483


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 384 VLWASGIVRYYAGKADKI 437
           + WA G+ R+Y G  D I
Sbjct: 519 ISWAFGVNRFYDGIRDMI 536


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQV 80
           YY +N+I+ + V + V
Sbjct: 102 YYNINYIEQIPVPVPV 117


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQV 80
           YY +N+I+ + V + V
Sbjct: 102 YYNINYIEQIPVPVPV 117


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQV 80
           YY +N+I+ + V + V
Sbjct: 102 YYNINYIEQIPVPVPV 117


>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQV 80
           YY +N+I+ + V + V
Sbjct: 107 YYNINYIEQIPVPVPV 122


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQV 80
           YY +N+I+ + V + V
Sbjct: 107 YYNINYIEQIPVPVPV 122


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQV 80
           YY +N+I+ + V + V
Sbjct: 109 YYNINYIEQIPVPVPV 124


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQV 80
           YY +N+I+ + V + V
Sbjct: 110 YYNINYIEQIPVPVPV 125


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQV 80
           YY +N+I+ + V + V
Sbjct: 110 YYNINYIEQIPVPVPV 125


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQV 80
           YY +N+I+ + V + V
Sbjct: 110 YYNINYIEQIPVPVPV 125


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQV 80
           YY +N+I+ + V + V
Sbjct: 110 YYNINYIEQIPVPVPV 125


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQV 80
           YY +N+I+ + V + V
Sbjct: 110 YYNINYIEQIPVPVPV 125


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQV 80
           YY +N+I+ + V + V
Sbjct: 110 YYNINYIEQIPVPVPV 125


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQV 80
           YY +N+I+ + V + V
Sbjct: 110 YYNINYIEQIPVPVPV 125


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQV 80
           YY +N+I+ + V + V
Sbjct: 113 YYNINYIEQIPVPVPV 128


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQV 80
           YY +N+I+ + V + V
Sbjct: 118 YYNINYIEQIPVPVPV 133


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 139 TINPQDESVIVQVAEGDR 192
           TINP+D  +I +  EG +
Sbjct: 154 TINPEDVILIRRTGEGSK 171


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 139 TINPQDESVIVQVAEGDR 192
           TINP+D  +I +  EG +
Sbjct: 154 TINPEDVILIRRTGEGSK 171


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQV 80
           YY +N+I+ + V + V
Sbjct: 327 YYNINYIEQIPVPVPV 342


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQV 80
           YY +N+I+ + V + V
Sbjct: 345 YYNINYIEQIPVPVPV 360


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQV 80
           YY +N+I+ + V + V
Sbjct: 352 YYNINYIEQIPVPVPV 367


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 33  YYRVNFIKMVKVDIQV 80
           YY +N+I+ + V + V
Sbjct: 335 YYNINYIEQIPVPVPV 350


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,293
Number of Sequences: 438
Number of extensions: 2541
Number of successful extensions: 59
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -