Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_G19
(516 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q25490 Cluster: Apolipophorins precursor [Contains: Apo... 220 2e-56
UniRef50_Q9U943 Cluster: Apolipophorins precursor [Contains: Apo... 43 0.004
UniRef50_Q5BZM7 Cluster: SJCHGC05351 protein; n=2; Schistosoma j... 38 0.18
UniRef50_Q9A4M0 Cluster: Methyl-accepting chemotaxis protein Mcp... 37 0.31
UniRef50_A2G6N6 Cluster: Putative uncharacterized protein; n=1; ... 36 0.41
UniRef50_Q5N5S0 Cluster: Putative uncharacterized protein; n=2; ... 35 1.3
UniRef50_Q22GX9 Cluster: Putative uncharacterized protein; n=1; ... 34 1.7
UniRef50_Q0I2H0 Cluster: Putative uncharacterized protein; n=1; ... 33 2.9
UniRef50_A4AMR5 Cluster: Zn-dependent alcohol dehydrogenase; n=2... 33 2.9
UniRef50_Q8W1K5 Cluster: Homeodomain leucine zipper protein CPHB... 33 2.9
UniRef50_Q7MKC8 Cluster: Putative uncharacterized protein VV1877... 33 5.1
UniRef50_Q0IIB5 Cluster: Similar to TSC22 domain family 4; n=3; ... 33 5.1
UniRef50_A0DTN4 Cluster: Chromosome undetermined scaffold_63, wh... 33 5.1
UniRef50_Q3IM13 Cluster: IS1341-type transposase; n=1; Natronomo... 33 5.1
UniRef50_Q8F5J0 Cluster: Putative outermembrane protein; n=2; Le... 32 6.8
UniRef50_A6Q822 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_A2EMR6 Cluster: Viral A-type inclusion protein, putativ... 32 6.8
UniRef50_UPI000069F02C Cluster: Ankyrin repeat domain-containing... 32 8.9
UniRef50_UPI000069F02B Cluster: Ankyrin repeat domain-containing... 32 8.9
UniRef50_Q93MA4 Cluster: Putative uncharacterized protein PCP43;... 32 8.9
UniRef50_Q7P5V6 Cluster: Hemolysin; n=4; Fusobacterium nucleatum... 32 8.9
UniRef50_Q1QGI5 Cluster: MCP methyltransferase, CheR-type; n=1; ... 32 8.9
>UniRef50_Q25490 Cluster: Apolipophorins precursor [Contains:
Apolipophorin-2 (Apolipophorin II) (apoLp-2);
Apolipophorin-1 (Apolipophorin I) (apoLp-1)]; n=5;
Ditrysia|Rep: Apolipophorins precursor [Contains:
Apolipophorin-2 (Apolipophorin II) (apoLp-2);
Apolipophorin-1 (Apolipophorin I) (apoLp-1)] - Manduca
sexta (Tobacco hawkmoth) (Tobacco hornworm)
Length = 3305
Score = 220 bits (537), Expect = 2e-56
Identities = 96/169 (56%), Positives = 130/169 (76%)
Frame = +2
Query: 8 VSKLLLEVSPRKFEFLAETPFVKVVHIDAGFTSTPEQRTYQSLFSVCLLEGNVVQIKTLM 187
V+K++ E +P +FLA+TPFVK + ++ F +QRT Q LF +CLLEG VQ+ L+
Sbjct: 2253 VAKVMFETTPNSVKFLADTPFVKAIDVEGSFNVNQQQRTQQCLFRICLLEGKPVQMSALV 2312
Query: 188 KDFQYFEFTTEESGCKFTVVAHLVPEKRADISADLILSGSKKNIAHGALFLKDNTIKSEY 367
KD+QY+EFTTEES K + V HL+PEKR DIS D+ILSG KKNIAHGALFL+DN +KS+Y
Sbjct: 2313 KDYQYYEFTTEESNRKLSYVGHLIPEKRVDISTDIILSGDKKNIAHGALFLQDNLVKSDY 2372
Query: 368 GASKDNFNHLMTTVKKDVEGLNDRIKDLGEKSSQDFENLLKRATPYFKR 514
G SK+NFN+ + +KKD++ L DRIK++GEK+S+D E + +RA PYFK+
Sbjct: 2373 GLSKENFNYFLNALKKDLDTLEDRIKNVGEKASKDVEAVTQRAAPYFKK 2421
>UniRef50_Q9U943 Cluster: Apolipophorins precursor [Contains:
Apolipophorin-2 (Apolipophorin II) (apoLp-2);
Apolipophorin-1 (Apolipophorin I) (apoLp-1)]; n=2;
cellular organisms|Rep: Apolipophorins precursor
[Contains: Apolipophorin-2 (Apolipophorin II) (apoLp-2);
Apolipophorin-1 (Apolipophorin I) (apoLp-1)] - Locusta
migratoria (Migratory locust)
Length = 3380
Score = 43.2 bits (97), Expect = 0.004
Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 9/179 (5%)
Frame = +2
Query: 5 EVSKLLLEVSPRKFEFLAETPFVKVVHIDAGFTSTPEQRTYQSLFSVCLLEGNVVQIKTL 184
E EVS K + P ++HIDA + + + + L +V+ I+
Sbjct: 2320 EFKNFQFEVSTEKLLVHVKVPNHHLLHIDANTKINDKHASGDASVHIIGLPTSVIHIEGE 2379
Query: 185 MKDFQYFEFTTEESGC--KFTVVAHLVPEKRADISADLILSGSKKNIAHGALFLKDNTIK 358
K F + T G K ++A L + AD I KK + + L K ++ K
Sbjct: 2380 NKGFPVVKGTISSEGTPNKLELIADL--SDGLLVEADFISESGKKELFYTFLSGKKDSRK 2437
Query: 359 SEYGASKDNFNHLMTTVKKDVEGLNDRIKDLGE-------KSSQDFENLLKRATPYFKR 514
E+ S +N + K D++ + +++K++ + K S + LK P F+R
Sbjct: 2438 PEFRWSVENIQSALEPHKNDIQEVLNKLKEISDEAGNEITKESSRLADSLKAGLPNFRR 2496
>UniRef50_Q5BZM7 Cluster: SJCHGC05351 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC05351 protein - Schistosoma
japonicum (Blood fluke)
Length = 301
Score = 37.5 bits (83), Expect = 0.18
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +1
Query: 22 ARGITAQIRIPG*NTICEGRAHRCRFHLNSRTKDLSVAIQCLPIRRKCGADKNSDE 189
++GI QIRI G C R L R ++S I C P R CGA+ ++E
Sbjct: 246 SKGIGLQIRISGQAFTCPVNGGHVRVKLQIRNSNISANITCPPCRTMCGAECPNEE 301
>UniRef50_Q9A4M0 Cluster: Methyl-accepting chemotaxis protein McpR,
putative; n=1; Caulobacter vibrioides|Rep:
Methyl-accepting chemotaxis protein McpR, putative -
Caulobacter crescentus (Caulobacter vibrioides)
Length = 459
Score = 36.7 bits (81), Expect = 0.31
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Frame = +2
Query: 209 FTTEESGCKFTVVAHLVPEKRADISADLI--LSGSKKNIAHGALFLKDNTIKSE-YGASK 379
F T+ S K VV ++ R D +I LS K +A G L + + + SE YG +
Sbjct: 96 FATDVSELKIEVVRPVIAPGRTDDQDQVITVLSEQFKALAAGDLTARVDVVFSERYGHVR 155
Query: 380 DNFNHLMTTVKKDVEGLNDRIKDLGEKSSQ 469
D FN MT + + ++ ++ LGE S +
Sbjct: 156 DEFNAAMTKLGQVMDEISMAAGGLGESSDE 185
>UniRef50_A2G6N6 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 847
Score = 36.3 bits (80), Expect = 0.41
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +2
Query: 248 AHLVPEKRADISADLILSGSKKNIAHG-ALFLKDNTIKSEYGASKDNFNHLMTTVKKDVE 424
+ L+ EKR +A++ + N+ + AL + ++E A D MTT KD+E
Sbjct: 376 SELLAEKRLRKAAEVAKEAAVTNLKNAYALLAANENTRNESTAEIDRITTEMTTKNKDIE 435
Query: 425 GLNDRIKDLGEKSSQDFENL 484
+ IK+L E+ Q E L
Sbjct: 436 EKDATIKNLTEELKQTVEKL 455
>UniRef50_Q5N5S0 Cluster: Putative uncharacterized protein; n=2;
Synechococcus elongatus|Rep: Putative uncharacterized
protein - Synechococcus sp. (strain ATCC 27144 / PCC
6301 / SAUG 1402/1)(Anacystis nidulans)
Length = 456
Score = 34.7 bits (76), Expect = 1.3
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Frame = +2
Query: 218 EESGCKFTVVAHLVPEKRADISADLILSGSKKNIAHGALFLKDNTIKSEYG----ASKDN 385
++SG FT + V +K ++ + + N+ A L T K ++G A KD+
Sbjct: 55 DDSGNPFTTIFKSVTDKATELGS--AATEGLSNLQESATELAAET-KEKFGNFAEAHKDD 111
Query: 386 FNHLMTTVKKDV----EGLNDRIKDLGEKSSQDFENLLKRATPY 505
L+T+ + E ++DR +LGE +++ F NL + A +
Sbjct: 112 LGQLLTSAQGKAASFGEAVSDRFGELGESATESFGNLQEGAAGF 155
>UniRef50_Q22GX9 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 896
Score = 34.3 bits (75), Expect = 1.7
Identities = 23/114 (20%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Frame = +2
Query: 149 LLEGNVVQIK--TLMKDFQYFEFTTEESGCKFTVVAHLVPEKRADISADLILSGSKKNIA 322
+L+ +V IK T +K F Y +F + + T+ + +P+ + + + I
Sbjct: 151 ILQSKIVLIKYNTSLKQFYYQQFKSVKRDTDITIYS--LPKSLIVCIRNKTQVNNMEGIG 208
Query: 323 HGALFLKDNTIKSEYGASKDNFNHLMTTVKKDVEGLNDRIKDLGEKSSQDFENL 484
G + + D ++ + + + N+N +++ + + L D ++ + SQ FEN+
Sbjct: 209 DGFINVTDMKVRQQ-SSQQANYNSNTSSINRTIISLQDNKRESSFQPSQQFENM 261
>UniRef50_Q0I2H0 Cluster: Putative uncharacterized protein; n=1;
Haemophilus somnus 129PT|Rep: Putative uncharacterized
protein - Haemophilus somnus (strain 129Pt) (Histophilus
somni (strain 129Pt))
Length = 4238
Score = 33.5 bits (73), Expect = 2.9
Identities = 27/110 (24%), Positives = 48/110 (43%)
Frame = +2
Query: 152 LEGNVVQIKTLMKDFQYFEFTTEESGCKFTVVAHLVPEKRADISADLILSGSKKNIAHGA 331
L+ N ++K K+ + E A LV +K A+I+A L +N++
Sbjct: 3841 LDINAEKVKQAEKEVKAKRSEAERKATMLKAKAALVEQKEAEITA---LKQEIENLSGDE 3897
Query: 332 LFLKDNTIKSEYGASKDNFNHLMTTVKKDVEGLNDRIKDLGEKSSQDFEN 481
K+ +K+ A FN + T KD++ ND +K ++ + EN
Sbjct: 3898 KTQKEAELKA-IEAELSQFNDELATATKDLKTANDALKTANDELTNFTEN 3946
>UniRef50_A4AMR5 Cluster: Zn-dependent alcohol dehydrogenase; n=2;
Flavobacteriales|Rep: Zn-dependent alcohol dehydrogenase
- Flavobacteriales bacterium HTCC2170
Length = 337
Score = 33.5 bits (73), Expect = 2.9
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 296 LSGSKKNIAHGALFLKDNTIKSEYGASKDNFNHLMTTVKK 415
LS N H + K++TI A+ D+F H+MT +KK
Sbjct: 259 LSKGNLNFVHPEIHAKESTILCSRNATLDDFKHVMTVLKK 298
>UniRef50_Q8W1K5 Cluster: Homeodomain leucine zipper protein CPHB-4;
n=1; Craterostigma plantagineum|Rep: Homeodomain leucine
zipper protein CPHB-4 - Craterostigma plantagineum
Length = 282
Score = 33.5 bits (73), Expect = 2.9
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Frame = +2
Query: 236 FTVVAHLVPEKRADISADLILSGSKKNI--AHGALFLKDNTIKSEYGASKDNFN---HLM 400
F V L PE++ ++ +L L + + + K ++ +YG K N+N H
Sbjct: 62 FEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARSKTKNLERDYGVLKSNYNALKHDF 121
Query: 401 TTVKKDVEGLNDRIKDLGEKSSQDFENLLKRATPY 505
T+K+D E L I +L K ++D ++ P+
Sbjct: 122 ETLKRDNESLLKEIHELKSKLNEDDDSKSVEEEPF 156
>UniRef50_Q7MKC8 Cluster: Putative uncharacterized protein VV1877;
n=1; Vibrio vulnificus YJ016|Rep: Putative
uncharacterized protein VV1877 - Vibrio vulnificus
(strain YJ016)
Length = 72
Score = 32.7 bits (71), Expect = 5.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 246 TTVNLQPDSSVVNSKYWKSFIRVFICTTFPSN 151
TTVN +P+ N+K W+S + +C F ++
Sbjct: 20 TTVNTKPNDDTKNAKRWESLLNALLCINFATS 51
>UniRef50_Q0IIB5 Cluster: Similar to TSC22 domain family 4; n=3;
Mammalia|Rep: Similar to TSC22 domain family 4 - Bos
taurus (Bovine)
Length = 168
Score = 32.7 bits (71), Expect = 5.1
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +2
Query: 326 GALFLKDNTIKSEYGASKDNFNHLMTTVKKDVEGLNDRIKDLGEKSSQ-DFENLLKRA 496
G+L DN I+ K +HLM V+++VE L ++I+DL E+++ + EN L RA
Sbjct: 86 GSLVGIDNKIEQAMDLVK---SHLMFAVREEVEVLKEQIRDLAERNAALEQENGLLRA 140
>UniRef50_A0DTN4 Cluster: Chromosome undetermined scaffold_63, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_63,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 566
Score = 32.7 bits (71), Expect = 5.1
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 10/162 (6%)
Frame = +2
Query: 14 KLLLEVSPRKFEFLAETPFVKVVHIDAGFTSTPEQRTYQSLFSVC--LL--EGNVV--QI 175
KL ++++ + + +K + + FT EQ + C LL E N++ ++
Sbjct: 82 KLKIQINQLNSQIEEKQSQIKQLQKNPNFTRASEQNILIEYLNYCSSLLKQEQNLMPNEV 141
Query: 176 KTLMKDFQYFEFTT---EESGCKFTVVAHLVPEKRADISADLILSGSK-KNIAHGALFLK 343
+ L + Q E T EE ++ L+ +K + DL + ++ K +LK
Sbjct: 142 EDLKVEIQELEITKKLLEEQSENLSIQKSLLEKKISQQYLDLDQTKNEMKEKERDLRYLK 201
Query: 344 DNTIKSEYGASKDNFNHLMTTVKKDVEGLNDRIKDLGEKSSQ 469
IK E + N +T KK+V ++D+ ++ EK Q
Sbjct: 202 KEMIKFEEKQKETQQNQKVTVKKKEVIDIDDKKAEIIEKDQQ 243
>UniRef50_Q3IM13 Cluster: IS1341-type transposase; n=1; Natronomonas
pharaonis DSM 2160|Rep: IS1341-type transposase -
Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
Length = 354
Score = 32.7 bits (71), Expect = 5.1
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Frame = +2
Query: 212 TTEESGCKFTV-VAHLVPEKRADISADLILS---GSKKNIAHGALFLKDNTIKSEYGASK 379
T SG +T+ V VPE+ + AD +L+ G KK A+ L + E
Sbjct: 11 TLHASGHGYTLDVPVAVPEQDTETVADRVLAADLGVKKQAT--AVVLDSGDVAHEQVTPP 68
Query: 380 DNFNH----LMTTVKKDVEGLNDRIKDL---GEKSSQDFENLL 487
+H + VK D EG+NDR+ +L G+ ++ F++LL
Sbjct: 69 QFLDHPAKDKLFRVKADAEGINDRLAELRRQGKAHTERFDHLL 111
>UniRef50_Q8F5J0 Cluster: Putative outermembrane protein; n=2;
Leptospira interrogans|Rep: Putative outermembrane
protein - Leptospira interrogans
Length = 478
Score = 32.3 bits (70), Expect = 6.8
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +2
Query: 290 LILSGSKKNIAHGALFLKDNTIKSEYGASKDNFNHLMTTVKKDVEGLNDRIKDLGEKSSQ 469
LI S S G +F+ N+ +++G+ D +HL T VK + G I+ LG SQ
Sbjct: 312 LIQSNSITVDTLGNVFVGGNS-NTDFGSGADRTSHLATLVKYNSLGHLQWIQQLGPAQSQ 370
Query: 470 DFEN 481
D +N
Sbjct: 371 DPQN 374
>UniRef50_A6Q822 Cluster: Putative uncharacterized protein; n=1;
Sulfurovum sp. NBC37-1|Rep: Putative uncharacterized
protein - Sulfurovum sp. (strain NBC37-1)
Length = 154
Score = 32.3 bits (70), Expect = 6.8
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 377 KDNFNHLMTTVKKDVEGLNDRIKDLGEKSSQDFENLLKRATPYFKR 514
K + + T KK ++ L ++I+D+ E S+D + + K YF++
Sbjct: 2 KKEYEEFIETAKKSIDVLEEKIEDMNEDFSEDAKLVWKDLKSYFEK 47
>UniRef50_A2EMR6 Cluster: Viral A-type inclusion protein, putative;
n=4; cellular organisms|Rep: Viral A-type inclusion
protein, putative - Trichomonas vaginalis G3
Length = 2416
Score = 32.3 bits (70), Expect = 6.8
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +2
Query: 362 EYGASKDNFNHLMTTVKKDVEGLNDRIKDLGEKSSQDFENLL 487
E K+N H + + K+++E L + K++G K+ + F NL+
Sbjct: 1925 EMNKLKENHQHEIESYKQNIEDLEHQFKEIGCKNDEYFNNLI 1966
>UniRef50_UPI000069F02C Cluster: Ankyrin repeat domain-containing
protein 26.; n=2; Tetrapoda|Rep: Ankyrin repeat
domain-containing protein 26. - Xenopus tropicalis
Length = 597
Score = 31.9 bits (69), Expect = 8.9
Identities = 23/110 (20%), Positives = 48/110 (43%)
Frame = +2
Query: 185 MKDFQYFEFTTEESGCKFTVVAHLVPEKRADISADLILSGSKKNIAHGALFLKDNTIKSE 364
+K+ ++ ++ CK TV + EK A I ++ +L + + +KD T+
Sbjct: 425 IKELEHTLQLEKDKICKSTVKQESLQEKLAQIQSENMLLRQQIEDVNNKGIIKDKTVSDV 484
Query: 365 YGASKDNFNHLMTTVKKDVEGLNDRIKDLGEKSSQDFENLLKRATPYFKR 514
+ + ++ V+ + +R KDL K ++ E L + T +R
Sbjct: 485 QDKFTEIIAKIRADAERQVQIIEERNKDLIIKYNETREQLYRLETEKVER 534
>UniRef50_UPI000069F02B Cluster: Ankyrin repeat domain-containing
protein 26.; n=3; Xenopus tropicalis|Rep: Ankyrin repeat
domain-containing protein 26. - Xenopus tropicalis
Length = 1016
Score = 31.9 bits (69), Expect = 8.9
Identities = 23/110 (20%), Positives = 48/110 (43%)
Frame = +2
Query: 185 MKDFQYFEFTTEESGCKFTVVAHLVPEKRADISADLILSGSKKNIAHGALFLKDNTIKSE 364
+K+ ++ ++ CK TV + EK A I ++ +L + + +KD T+
Sbjct: 597 IKELEHTLQLEKDKICKSTVKQESLQEKLAQIQSENMLLRQQIEDVNNKGIIKDKTVSDV 656
Query: 365 YGASKDNFNHLMTTVKKDVEGLNDRIKDLGEKSSQDFENLLKRATPYFKR 514
+ + ++ V+ + +R KDL K ++ E L + T +R
Sbjct: 657 QDKFTEIIAKIRADAERQVQIIEERNKDLIIKYNETREQLYRLETEKVER 706
>UniRef50_Q93MA4 Cluster: Putative uncharacterized protein PCP43;
n=2; Clostridium perfringens|Rep: Putative
uncharacterized protein PCP43 - Clostridium perfringens
Length = 304
Score = 31.9 bits (69), Expect = 8.9
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +2
Query: 344 DNTIKSEYGASKDNFNHLMTTVKKDVEGLNDRIKDLGEKSSQDFENLLK 490
D+TI S G D+ N + +KKD + LND+I L +K +D E ++K
Sbjct: 258 DSTITSLKG-QVDSLNKDVEKIKKDNKELNDKIDKLNKK-KEDLEKMVK 304
>UniRef50_Q7P5V6 Cluster: Hemolysin; n=4; Fusobacterium nucleatum|Rep:
Hemolysin - Fusobacterium nucleatum subsp. vincentii ATCC
49256
Length = 2621
Score = 31.9 bits (69), Expect = 8.9
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 227 GCKFTVVAHLVPEKRADISA-DLILSGSKKNIAHGALFLKDNTIKSEYGASKDNFNHLMT 403
G K ++VA+ V ADI A D I G+KKN+ G L D +K+ KD +
Sbjct: 1472 GNKISIVANNVENLGADIKAQDKIQIGAKKNLVIGNLEAVDKKVKN---GGKD----FVL 1524
Query: 404 TVKKDVEGLNDRIKDL 451
KK G N R KD+
Sbjct: 1525 DEKKTNVGSNLRAKDI 1540
>UniRef50_Q1QGI5 Cluster: MCP methyltransferase, CheR-type; n=1;
Nitrobacter hamburgensis X14|Rep: MCP methyltransferase,
CheR-type - Nitrobacter hamburgensis (strain X14 / DSM
10229)
Length = 432
Score = 31.9 bits (69), Expect = 8.9
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 197 QYFEFTTEESGCKFTVVAHLVPEKRADIS 283
++FE +SGC F VV HL P++ ++++
Sbjct: 35 RFFEAMPSDSGCAFVVVLHLDPDRESEMA 63
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 513,736,481
Number of Sequences: 1657284
Number of extensions: 10049665
Number of successful extensions: 27704
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 26884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27696
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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