Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_G19
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    25   0.46 
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   4.3  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   4.3  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    21   5.7  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    21   5.7  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   5.7  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         21   7.5  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   7.5  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   7.5  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   7.5  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   10.0 
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   10.0 
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   10.0 

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 15/120 (12%)
 Frame = +2

Query: 110 PE-QRTYQSLFSVCLLEGNVVQIKTLMKDFQYFEFT--------TEESGCKFTVVAHLVP 262
           PE + T Q    V  L   +  +  ++K  + F+ T        +++ G +F V+  +  
Sbjct: 79  PESENTVQKAALVLRLREGIGSLARILKTIENFKGTVTHVESRPSKKEGLQFDVLVKV-- 136

Query: 263 EKRADISADLILSGSKKNIAHGALFLKDNTIKSE------YGASKDNFNHLMTTVKKDVE 424
           +        LI +  + +   G   L DN++  +      + +  DN NHLMT  + D++
Sbjct: 137 DMTRQYLLQLIRNLRQSSALDGVTLLADNSVSIKDPWFPRHASDLDNCNHLMTKFEPDLD 196


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -3

Query: 265 FWYQVCNNREFTA*FLCSEFEILEVLHQSFYLHHI 161
           F+   CN++  T  + C + ++L     S+YL  I
Sbjct: 214 FFTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQI 248


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -3

Query: 265 FWYQVCNNREFTA*FLCSEFEILEVLHQSFYLHHI 161
           F+   CN++  T  + C + ++L     S+YL  I
Sbjct: 214 FFTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQI 248


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 436 PHQRSRREIKP 468
           PH R RRE KP
Sbjct: 251 PHPRLRREAKP 261


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 436 PHQRSRREIKP 468
           PH R RRE KP
Sbjct: 139 PHPRLRREAKP 149


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 23  LEVSPRKFEFLAETPFVKVVHIDAGFTSTPEQ 118
           LE + + +E  +  PF      DA  +STPEQ
Sbjct: 304 LENTLKYYEVGSNVPFNFKFITDANSSSTPEQ 335


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 133 AIQCLPIRRKCGADKN 180
           AI+CL  RRK G+ +N
Sbjct: 82  AIRCLAQRRKGGSCRN 97


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +2

Query: 353 IKSEYGASKDNFNHLMTTVKKDVEGLNDRIKDLGEKSS 466
           I   YG+   NFN              ++++DL  K S
Sbjct: 458 IAESYGSGSTNFNERPAVAVVSKSSSINKLEDLRNKKS 495


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +2

Query: 353 IKSEYGASKDNFNHLMTTVKKDVEGLNDRIKDLGEKSS 466
           I   YG+   NFN              ++++DL  K S
Sbjct: 458 IAESYGSGSTNFNERPAVAVVSKSSSINKLEDLRNKKS 495


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +2

Query: 353 IKSEYGASKDNFNHLMTTVKKDVEGLNDRIKDLGEKSS 466
           I   YG+   NFN              ++++DL  K S
Sbjct: 458 IAESYGSGSTNFNERPAVAVVSKSSSINKLEDLRNKKS 495


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 6/26 (23%), Positives = 15/26 (57%)
 Frame = -1

Query: 255 RCATTVNLQPDSSVVNSKYWKSFIRV 178
           + ++  +++PDS V  S  W+  + +
Sbjct: 85  KTSSNASVEPDSKVTYSGLWRVCVAI 110


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +3

Query: 249 HTWYQKNVLTSVRISFY 299
           H W ++NVL    + F+
Sbjct: 181 HGWMRRNVLNKQHVHFH 197


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +2

Query: 155 EGNVVQIKTLMKDFQYFEFTTE 220
           EG    I  L+KD QY    TE
Sbjct: 673 EGTRADICQLLKDSQYIREQTE 694


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,636
Number of Sequences: 438
Number of extensions: 2866
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)