Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_G14
         (557 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P50239 Cluster: Ecdysone-inducible protein E75; n=17; E...    65   9e-10
UniRef50_Q3JIP1 Cluster: Putative uncharacterized protein; n=1; ...    33   4.5  
UniRef50_Q7G2Z3 Cluster: Expressed protein; n=3; Oryza sativa (j...    33   4.5  
UniRef50_Q2KXE3 Cluster: Amino acid ABC transporter, solute-bind...    32   7.9  

>UniRef50_P50239 Cluster: Ecdysone-inducible protein E75; n=17;
           Endopterygota|Rep: Ecdysone-inducible protein E75 -
           Galleria mellonella (Wax moth)
          Length = 711

 Score = 65.3 bits (152), Expect = 9e-10
 Identities = 38/66 (57%), Positives = 44/66 (66%), Gaps = 10/66 (15%)
 Frame = -2

Query: 556 EGCPLRTGAILSCYRGTTPAPQPVLALQVDV--TDA--PLNL------XXXXXXXPRSFM 407
           EGCPLR G +L+C+RG +PAPQPV+ALQVDV  TDA  PLNL             PRS+M
Sbjct: 646 EGCPLRAGGLLTCFRGASPAPQPVIALQVDVAETDAPQPLNLSKKSPSPSPPPPPPRSYM 705

Query: 406 PQMLEA 389
           P ML A
Sbjct: 706 PPMLPA 711


>UniRef50_Q3JIP1 Cluster: Putative uncharacterized protein; n=1;
           Burkholderia pseudomallei 1710b|Rep: Putative
           uncharacterized protein - Burkholderia pseudomallei
           (strain 1710b)
          Length = 614

 Score = 33.1 bits (72), Expect = 4.5
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = -3

Query: 438 RNHHRRPAHLCRRC*KREAGLRSRTS 361
           R H RR AHL RR  +R A LR+RT+
Sbjct: 80  RRHRRRQAHLARRARRRVARLRARTA 105


>UniRef50_Q7G2Z3 Cluster: Expressed protein; n=3; Oryza sativa
           (japonica cultivar-group)|Rep: Expressed protein - Oryza
           sativa subsp. japonica (Rice)
          Length = 163

 Score = 33.1 bits (72), Expect = 4.5
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = -3

Query: 522 RATAERHRRRSQCWRCKWM*RMRH*TFQRNHHRRPAHLCRRC*KREA 382
           RA ++  RRR + W  +     RH   +R HHRR  H  RR  +R A
Sbjct: 54  RAGSQGRRRRRRRWAGRVAQPRRHARLRRRHHRRADHRQRRAPERGA 100


>UniRef50_Q2KXE3 Cluster: Amino acid ABC transporter, solute-binding
           protein precursor; n=1; Bordetella avium 197N|Rep: Amino
           acid ABC transporter, solute-binding protein precursor -
           Bordetella avium (strain 197N)
          Length = 284

 Score = 32.3 bits (70), Expect = 7.9
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = -2

Query: 538 TGAILSCYRGTTPAPQPVLALQVDVTDAP 452
           TGA+L  + G TPA  P L   VD T AP
Sbjct: 14  TGALLMAFAGQTPAQTPPLRTAVDATFAP 42


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,556,125
Number of Sequences: 1657284
Number of extensions: 8770538
Number of successful extensions: 23917
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23671
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37071859483
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)