Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_G13
(496 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016687-3|AAC48090.1| 375|Caenorhabditis elegans Paralysed arr... 172 1e-43
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 43 1e-04
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 43 1e-04
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 43 1e-04
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 43 1e-04
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 43 1e-04
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 43 1e-04
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 43 1e-04
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 43 1e-04
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 43 1e-04
AF038621-4|AAK71387.2| 1064|Caenorhabditis elegans Hypothetical ... 42 3e-04
U39676-3|AAB37032.2| 941|Caenorhabditis elegans Hypothetical pr... 36 0.012
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 35 0.028
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 35 0.028
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 35 0.028
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 35 0.028
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 35 0.028
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 31 0.46
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 31 0.46
AF100673-5|AAC69000.1| 1084|Caenorhabditis elegans Hypothetical ... 31 0.46
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 31 0.46
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 30 0.80
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 30 0.80
U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein ... 28 3.2
U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein. 28 3.2
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 28 3.2
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 28 3.2
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 28 3.2
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 27 5.7
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z75546-7|CAA99895.1| 566|Caenorhabditis elegans Hypothetical pr... 27 5.7
U12966-6|AAM48533.1| 783|Caenorhabditis elegans Hypothetical pr... 27 5.7
>AF016687-3|AAC48090.1| 375|Caenorhabditis elegans Paralysed arrest
at two-fold protein6 protein.
Length = 375
Score = 172 bits (419), Expect = 1e-43
Identities = 81/137 (59%), Positives = 104/137 (75%)
Frame = +3
Query: 9 TTSYEELGARSERDAFDALFEHAPDKLQVVNKSLITFVNKHLGKLHLEVMDLETQFHDGV 188
TT EL + RDAFD LF++ PDKL V SL+ F NKHL K++LEV DL+ QF DGV
Sbjct: 239 TTVQTELAPKGTRDAFDTLFDYGPDKLAHVKTSLLAFCNKHLNKINLEVSDLDNQFQDGV 298
Query: 189 YLCLLMGLLEGFFVPLYDFHLTPQDFDQKVHNVTFAFELMQEVGLAKPKARPEDIVNLDL 368
+L LL+GLLEG+FVPLY F+L Q ++KV NV FAF+LM++ GL KP++R +DI N D+
Sbjct: 299 FLVLLVGLLEGYFVPLYHFNLQVQSHEEKVKNVQFAFKLMEDTGLEKPRSRVQDIANGDV 358
Query: 369 KSTLRVLYNLFTKYKNI 419
KSTLR+L+ LFTKYK+I
Sbjct: 359 KSTLRLLHLLFTKYKHI 375
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical
protein ZK1151.1h protein.
Length = 3424
Score = 42.7 bits (96), Expect = 1e-04
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +3
Query: 93 VVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTPQDFDQ 272
V K+ +VNKHL K ++ DL DG L L+ L G + + +
Sbjct: 40 VQKKTFTKWVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERIQKENGYTR----FH 95
Query: 273 KVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++ NV + + +++ + RPEDIV + K TL +++ + ++
Sbjct: 96 RIQNVQYCLDFLKKKNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQ 142
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 42.7 bits (96), Expect = 1e-04
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +3
Query: 93 VVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTPQDFDQ 272
V K+ +VNKHL K ++ DL DG L L+ L G + + +
Sbjct: 40 VQKKTFTKWVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERIQKENGYTR----FH 95
Query: 273 KVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++ NV + + +++ + RPEDIV + K TL +++ + ++
Sbjct: 96 RIQNVQYCLDFLKKKNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQ 142
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 42.7 bits (96), Expect = 1e-04
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +3
Query: 93 VVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTPQDFDQ 272
V K+ +VNKHL K ++ DL DG L L+ L G + + +
Sbjct: 40 VQKKTFTKWVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERIQKENGYTR----FH 95
Query: 273 KVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++ NV + + +++ + RPEDIV + K TL +++ + ++
Sbjct: 96 RIQNVQYCLDFLKKKNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQ 142
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical
protein ZK1151.1a protein.
Length = 3436
Score = 42.7 bits (96), Expect = 1e-04
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +3
Query: 93 VVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTPQDFDQ 272
V K+ +VNKHL K ++ DL DG L L+ L G + + +
Sbjct: 40 VQKKTFTKWVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERIQKENGYTR----FH 95
Query: 273 KVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++ NV + + +++ + RPEDIV + K TL +++ + ++
Sbjct: 96 RIQNVQYCLDFLKKKNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQ 142
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 42.7 bits (96), Expect = 1e-04
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +3
Query: 93 VVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTPQDFDQ 272
V K+ +VNKHL K ++ DL DG L L+ L G + + +
Sbjct: 40 VQKKTFTKWVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERIQKENGYTR----FH 95
Query: 273 KVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++ NV + + +++ + RPEDIV + K TL +++ + ++
Sbjct: 96 RIQNVQYCLDFLKKKNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQ 142
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical
protein ZK1151.1f protein.
Length = 3322
Score = 42.7 bits (96), Expect = 1e-04
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +3
Query: 93 VVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTPQDFDQ 272
V K+ +VNKHL K ++ DL DG L L+ L G + + +
Sbjct: 40 VQKKTFTKWVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERIQKENGYTR----FH 95
Query: 273 KVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++ NV + + +++ + RPEDIV + K TL +++ + ++
Sbjct: 96 RIQNVQYCLDFLKKKNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQ 142
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical
protein ZK1151.1e protein.
Length = 3323
Score = 42.7 bits (96), Expect = 1e-04
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +3
Query: 93 VVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTPQDFDQ 272
V K+ +VNKHL K ++ DL DG L L+ L G + + +
Sbjct: 40 VQKKTFTKWVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERIQKENGYTR----FH 95
Query: 273 KVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++ NV + + +++ + RPEDIV + K TL +++ + ++
Sbjct: 96 RIQNVQYCLDFLKKKNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQ 142
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical
protein ZK1151.1h protein.
Length = 3424
Score = 42.7 bits (96), Expect = 1e-04
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +3
Query: 93 VVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTPQDFDQ 272
V K+ +VNKHL K ++ DL DG L L+ L G + + +
Sbjct: 40 VQKKTFTKWVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERIQKENGYTR----FH 95
Query: 273 KVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++ NV + + +++ + RPEDIV + K TL +++ + ++
Sbjct: 96 RIQNVQYCLDFLKKKNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQ 142
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 42.7 bits (96), Expect = 1e-04
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +3
Query: 93 VVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTPQDFDQ 272
V K+ +VNKHL K ++ DL DG L L+ L G + + +
Sbjct: 40 VQKKTFTKWVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERIQKENGYTR----FH 95
Query: 273 KVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++ NV + + +++ + RPEDIV + K TL +++ + ++
Sbjct: 96 RIQNVQYCLDFLKKKNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQ 142
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 42.7 bits (96), Expect = 1e-04
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +3
Query: 93 VVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTPQDFDQ 272
V K+ +VNKHL K ++ DL DG L L+ L G + + +
Sbjct: 40 VQKKTFTKWVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERIQKENGYTR----FH 95
Query: 273 KVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++ NV + + +++ + RPEDIV + K TL +++ + ++
Sbjct: 96 RIQNVQYCLDFLKKKNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQ 142
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical
protein ZK1151.1a protein.
Length = 3436
Score = 42.7 bits (96), Expect = 1e-04
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +3
Query: 93 VVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTPQDFDQ 272
V K+ +VNKHL K ++ DL DG L L+ L G + + +
Sbjct: 40 VQKKTFTKWVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERIQKENGYTR----FH 95
Query: 273 KVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++ NV + + +++ + RPEDIV + K TL +++ + ++
Sbjct: 96 RIQNVQYCLDFLKKKNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQ 142
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 42.7 bits (96), Expect = 1e-04
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +3
Query: 93 VVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTPQDFDQ 272
V K+ +VNKHL K ++ DL DG L L+ L G + + +
Sbjct: 40 VQKKTFTKWVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERIQKENGYTR----FH 95
Query: 273 KVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++ NV + + +++ + RPEDIV + K TL +++ + ++
Sbjct: 96 RIQNVQYCLDFLKKKNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQ 142
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical
protein ZK1151.1f protein.
Length = 3322
Score = 42.7 bits (96), Expect = 1e-04
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +3
Query: 93 VVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTPQDFDQ 272
V K+ +VNKHL K ++ DL DG L L+ L G + + +
Sbjct: 40 VQKKTFTKWVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERIQKENGYTR----FH 95
Query: 273 KVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++ NV + + +++ + RPEDIV + K TL +++ + ++
Sbjct: 96 RIQNVQYCLDFLKKKNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQ 142
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical
protein ZK1151.1e protein.
Length = 3323
Score = 42.7 bits (96), Expect = 1e-04
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +3
Query: 93 VVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTPQDFDQ 272
V K+ +VNKHL K ++ DL DG L L+ L G + + +
Sbjct: 40 VQKKTFTKWVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERIQKENGYTR----FH 95
Query: 273 KVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++ NV + + +++ + RPEDIV + K TL +++ + ++
Sbjct: 96 RIQNVQYCLDFLKKKNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQ 142
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 42.7 bits (96), Expect = 1e-04
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +3
Query: 93 VVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTPQDFDQ 272
V K+ +VNKHL K ++ DL DG L L+ L G + + +
Sbjct: 40 VQKKTFTKWVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERIQKENGYTR----FH 95
Query: 273 KVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++ NV + + +++ + RPEDIV + K TL +++ + ++
Sbjct: 96 RIQNVQYCLDFLKKKNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQ 142
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 42.7 bits (96), Expect = 1e-04
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +3
Query: 93 VVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTPQDFDQ 272
V K+ +VNKHL K ++ DL DG L L+ L G + + +
Sbjct: 40 VQKKTFTKWVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERIQKENGYTR----FH 95
Query: 273 KVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++ NV + + +++ + RPEDIV + K TL +++ + ++
Sbjct: 96 RIQNVQYCLDFLKKKNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQ 142
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 42.7 bits (96), Expect = 1e-04
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +3
Query: 93 VVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTPQDFDQ 272
V K+ +VNKHL K ++ DL DG L L+ L G + + +
Sbjct: 40 VQKKTFTKWVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERIQKENGYTR----FH 95
Query: 273 KVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++ NV + + +++ + RPEDIV + K TL +++ + ++
Sbjct: 96 RIQNVQYCLDFLKKKNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQ 142
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 42.7 bits (96), Expect = 1e-04
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +3
Query: 93 VVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTPQDFDQ 272
V K+ +VNKHL K ++ DL DG L L+ L G + + +
Sbjct: 40 VQKKTFTKWVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERIQKENGYTR----FH 95
Query: 273 KVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++ NV + + +++ + RPEDIV + K TL +++ + ++
Sbjct: 96 RIQNVQYCLDFLKKKNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQ 142
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 42.7 bits (96), Expect = 1e-04
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +3
Query: 93 VVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTPQDFDQ 272
V K+ +VNKHL K ++ DL DG L L+ L G + + +
Sbjct: 40 VQKKTFTKWVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERIQKENGYTR----FH 95
Query: 273 KVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++ NV + + +++ + RPEDIV + K TL +++ + ++
Sbjct: 96 RIQNVQYCLDFLKKKNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQ 142
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 42.7 bits (96), Expect = 1e-04
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +3
Query: 93 VVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTPQDFDQ 272
V K+ +VNKHL K ++ DL DG L L+ L G + + +
Sbjct: 40 VQKKTFTKWVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERIQKENGYTR----FH 95
Query: 273 KVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++ NV + + +++ + RPEDIV + K TL +++ + ++
Sbjct: 96 RIQNVQYCLDFLKKKNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQ 142
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 42.7 bits (96), Expect = 1e-04
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +3
Query: 93 VVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTPQDFDQ 272
V K+ +VNKHL K ++ DL DG L L+ L G + + +
Sbjct: 40 VQKKTFTKWVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERIQKENGYTR----FH 95
Query: 273 KVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++ NV + + +++ + RPEDIV + K TL +++ + ++
Sbjct: 96 RIQNVQYCLDFLKKKNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQ 142
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 42.7 bits (96), Expect = 1e-04
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +3
Query: 93 VVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTPQDFDQ 272
V K+ +VNKHL K ++ DL DG L L+ L G + + +
Sbjct: 40 VQKKTFTKWVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTGERIQKENGYTR----FH 95
Query: 273 KVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++ NV + + +++ + RPEDIV + K TL +++ + ++
Sbjct: 96 RIQNVQYCLDFLKKKNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQ 142
>AF038621-4|AAK71387.2| 1064|Caenorhabditis elegans Hypothetical
protein M116.5 protein.
Length = 1064
Score = 41.5 bits (93), Expect = 3e-04
Identities = 29/116 (25%), Positives = 52/116 (44%)
Frame = +3
Query: 66 FEHAPDKLQVVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDF 245
F D +Q K+ +VNKHL K ++DL DG L L+ L G + +
Sbjct: 33 FNDVRDTMQ--KKTFTKWVNKHLTKTDHTIVDLFVDLRDGFALIALLEALTGERIQRENG 90
Query: 246 HLTPQDFDQKVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
+ ++ NV + + ++ + RPEDIV + K TL +++ + ++
Sbjct: 91 YTR----FHRIQNVQYCLDFLKMKNIKLVNIRPEDIVEGNGKLTLGLIWTIILNFQ 142
>U39676-3|AAB37032.2| 941|Caenorhabditis elegans Hypothetical
protein C23F12.2 protein.
Length = 941
Score = 36.3 bits (80), Expect = 0.012
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Frame = +3
Query: 96 VNKSLITFVNKHLGKLHLEVM-DLETQFHDGVYLCLLMGLLEG--FFVPLYDFHLTPQDF 266
++ L TF N +L V+ DL DGV L L+ +L+G ++ +YD P +
Sbjct: 13 IDIQLHTFTNWINEQLQGNVIRDLTQDLSDGVNLIKLVEILQGRRYYGKVYD--QDPTEI 70
Query: 267 DQKVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
QK+ NV A + ++E G+ DIV+ + K L +++ L +Y+
Sbjct: 71 -QKLMNVQMALDALREDGVKTVNIGSHDIVDGNEKLILGLIWCLVQRYQ 118
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 35.1 bits (77), Expect = 0.028
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Frame = +3
Query: 81 DKLQVVNKSLIT-FVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTP 257
D+ ++V K T +VN HL ++ +V DL DG L L+ +L G +P P
Sbjct: 36 DERELVQKKTFTKWVNSHLVRVSCKVQDLYMDMRDGKMLLRLLAVLSGERLP------KP 89
Query: 258 QDFDQKVH---NVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++H NV + ++ + DIV+ + + TL +++ + +++
Sbjct: 90 TPGKMRIHCLENVEKGLQFLRNQHVHLENLGSHDIVDGNSRLTLGLIWTIILRFQ 144
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 35.1 bits (77), Expect = 0.028
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Frame = +3
Query: 81 DKLQVVNKSLIT-FVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTP 257
D+ ++V K T +VN HL ++ +V DL DG L L+ +L G +P P
Sbjct: 36 DERELVQKKTFTKWVNSHLVRVSCKVQDLYMDMRDGKMLLRLLAVLSGERLP------KP 89
Query: 258 QDFDQKVH---NVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++H NV + ++ + DIV+ + + TL +++ + +++
Sbjct: 90 TPGKMRIHCLENVEKGLQFLRNQHVHLENLGSHDIVDGNSRLTLGLIWTIILRFQ 144
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 35.1 bits (77), Expect = 0.028
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Frame = +3
Query: 81 DKLQVVNKSLIT-FVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTP 257
D+ ++V K T +VN HL ++ +V DL DG L L+ +L G +P P
Sbjct: 36 DERELVQKKTFTKWVNSHLVRVSCKVQDLYMDMRDGKMLLRLLAVLSGERLP------KP 89
Query: 258 QDFDQKVH---NVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++H NV + ++ + DIV+ + + TL +++ + +++
Sbjct: 90 TPGKMRIHCLENVEKGLQFLRNQHVHLENLGSHDIVDGNSRLTLGLIWTIILRFQ 144
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 35.1 bits (77), Expect = 0.028
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Frame = +3
Query: 81 DKLQVVNKSLIT-FVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTP 257
D+ ++V K T +VN HL ++ +V DL DG L L+ +L G +P P
Sbjct: 36 DERELVQKKTFTKWVNSHLVRVSCKVQDLYMDMRDGKMLLRLLAVLSGERLP------KP 89
Query: 258 QDFDQKVH---NVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++H NV + ++ + DIV+ + + TL +++ + +++
Sbjct: 90 TPGKMRIHCLENVEKGLQFLRNQHVHLENLGSHDIVDGNSRLTLGLIWTIILRFQ 144
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 35.1 bits (77), Expect = 0.028
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Frame = +3
Query: 81 DKLQVVNKSLIT-FVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTP 257
D+ ++V K T +VN HL ++ +V DL DG L L+ +L G +P P
Sbjct: 36 DERELVQKKTFTKWVNSHLVRVSCKVQDLYMDMRDGKMLLRLLAVLSGERLP------KP 89
Query: 258 QDFDQKVH---NVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
++H NV + ++ + DIV+ + + TL +++ + +++
Sbjct: 90 TPGKMRIHCLENVEKGLQFLRNQHVHLENLGSHDIVDGNSRLTLGLIWTIILRFQ 144
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 31.1 bits (67), Expect = 0.46
Identities = 20/111 (18%), Positives = 53/111 (47%)
Frame = +3
Query: 81 DKLQVVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTPQ 260
+++ + K+ + N L + LE++DL DG+ L L+ ++ G + + +
Sbjct: 48 ERVHIQKKTFTKWCNSFLNRASLEIVDLFEDVGDGIMLMKLLEIISGDKLGKPN---RGR 104
Query: 261 DFDQKVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
QKV N+ + +++ + EDI++ + + L +++ + +++
Sbjct: 105 MRVQKVENLNKVLDFLKKKKIQLENIGAEDILDRNERLILGLIWTIILRFQ 155
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 31.1 bits (67), Expect = 0.46
Identities = 20/111 (18%), Positives = 53/111 (47%)
Frame = +3
Query: 81 DKLQVVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTPQ 260
+++ + K+ + N L + LE++DL DG+ L L+ ++ G + + +
Sbjct: 48 ERVHIQKKTFTKWCNSFLNRASLEIVDLFEDVGDGIMLMKLLEIISGDKLGKPN---RGR 104
Query: 261 DFDQKVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
QKV N+ + +++ + EDI++ + + L +++ + +++
Sbjct: 105 MRVQKVENLNKVLDFLKKKKIQLENIGAEDILDRNERLILGLIWTIILRFQ 155
>AF100673-5|AAC69000.1| 1084|Caenorhabditis elegans Hypothetical
protein Y66H1B.3 protein.
Length = 1084
Score = 31.1 bits (67), Expect = 0.46
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Frame = +3
Query: 72 HAPDKLQVVNKSLIT-FVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFH 248
H + +++ ++ T +V HL K + LET F DG+ L L +L V ++
Sbjct: 19 HDDAEWKIIQQNTFTRWVKNHLQKAGETIESLETDFSDGLKLIALAQVLSHKNVGKFNKK 78
Query: 249 LTPQDFDQKVHNVTFAFELMQ-EVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKY 410
+ + QK+ NV+ A Q E + IV+ + K L +++ L Y
Sbjct: 79 VAFR--SQKLENVSLALNFFQNEENIKIINIDSTHIVDHNKKLILGLVWTLILHY 131
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 31.1 bits (67), Expect = 0.46
Identities = 20/111 (18%), Positives = 53/111 (47%)
Frame = +3
Query: 81 DKLQVVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEGFFVPLYDFHLTPQ 260
+++ + K+ + N L + LE++DL DG+ L L+ ++ G + + +
Sbjct: 48 ERVHIQKKTFTKWCNSFLNRASLEIVDLFEDVGDGIMLMKLLEIISGDKLGKPN---RGR 104
Query: 261 DFDQKVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
QKV N+ + +++ + EDI++ + + L +++ + +++
Sbjct: 105 MRVQKVENLNKVLDFLKKKKIQLENIGAEDILDRNERLILGLIWTIILRFQ 155
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical
protein ZK1151.1d protein.
Length = 3405
Score = 30.3 bits (65), Expect = 0.80
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 93 VVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEG 221
V K+ +VNKHL K ++ DL DG L L+ L G
Sbjct: 40 VQKKTFTKWVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTG 82
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical
protein ZK1151.1d protein.
Length = 3405
Score = 30.3 bits (65), Expect = 0.80
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 93 VVNKSLITFVNKHLGKLHLEVMDLETQFHDGVYLCLLMGLLEG 221
V K+ +VNKHL K ++ DL DG L L+ L G
Sbjct: 40 VQKKTFTKWVNKHLSKTDHKIDDLFVDLRDGYALIALLEALTG 82
>U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein 502
protein.
Length = 1173
Score = 28.3 bits (60), Expect = 3.2
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 18 YEELGARSERDAFDALFEHAPDKLQVVNKSLITFVNKHLGKLHLEVMDL 164
Y+E G R + D F E+ K Q + ++L+ +K G L +EV +L
Sbjct: 727 YKEDGLRGKIDGFKHELENEKMKTQTLEENLLV-ADKERGMLKMEVQEL 774
>U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein.
Length = 1173
Score = 28.3 bits (60), Expect = 3.2
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 18 YEELGARSERDAFDALFEHAPDKLQVVNKSLITFVNKHLGKLHLEVMDL 164
Y+E G R + D F E+ K Q + ++L+ +K G L +EV +L
Sbjct: 727 YKEDGLRGKIDGFKHELENEKMKTQTLEENLLV-ADKERGMLKMEVQEL 774
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 28.3 bits (60), Expect = 3.2
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 267 DQKVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKY 410
+ V VT EL+QE+ K + + ED+ NL + VL+NL ++Y
Sbjct: 62 EMSVIQVTLKKELVQEMNPPKFE-KTEDMSNLSFLNDASVLHNLRSRY 108
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 28.3 bits (60), Expect = 3.2
Identities = 25/119 (21%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Frame = +3
Query: 66 FEHAPDKLQVVNKSLIT-FVNKHLGKLHLE--VMDLETQFHDGVYLCLLMGLLEGFFVPL 236
F P + + K+ T ++N HL + + DL DGV LC L+ +L G + +
Sbjct: 14 FRFRPHEDEKAQKNTFTRWINFHLEEHSSSGRIEDLFEDIRDGVLLCHLIEVLTGEALAV 73
Query: 237 YDFHLTPQDFDQKVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
+ ++ + + N+T A +++ GL DI + + + L +++ + ++
Sbjct: 74 HKGRVSKR--VHHIANLTTALTVLRRRGLELINNNAADIADGNPRIVLGLIWQIILHFQ 130
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 28.3 bits (60), Expect = 3.2
Identities = 25/119 (21%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Frame = +3
Query: 66 FEHAPDKLQVVNKSLIT-FVNKHLGKLHLE--VMDLETQFHDGVYLCLLMGLLEGFFVPL 236
F P + + K+ T ++N HL + + DL DGV LC L+ +L G + +
Sbjct: 14 FRFRPHEDEKAQKNTFTRWINFHLEEHSSSGRIEDLFEDIRDGVLLCHLIEVLTGEALAV 73
Query: 237 YDFHLTPQDFDQKVHNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKYK 413
+ ++ + + N+T A +++ GL DI + + + L +++ + ++
Sbjct: 74 HKGRVSKR--VHHIANLTTALTVLRRRGLELINNNAADIADGNPRIVLGLIWQIILHFQ 130
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 279 HNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKY 410
+ VT EL+QE+ K + + ED+ NL + VL+NL ++Y
Sbjct: 63 NEVTLKKELVQEMNPPKFE-KTEDMSNLSFLNDASVLHNLRSRY 105
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 279 HNVTFAFELMQEVGLAKPKARPEDIVNLDLKSTLRVLYNLFTKY 410
+ VT EL+QE+ K + + ED+ NL + VL+NL ++Y
Sbjct: 63 NEVTLKKELVQEMNPPKFE-KTEDMSNLSFLNDASVLHNLRSRY 105
>Z75546-7|CAA99895.1| 566|Caenorhabditis elegans Hypothetical
protein R05D11.8 protein.
Length = 566
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 72 HAPDKLQVVNKSLITFVNKHLGKLHLEVMDL 164
HA K+Q +N+ ITF + GK+H E +
Sbjct: 496 HAERKVQTINRGGITFEHLCQGKMHEETSSI 526
>U12966-6|AAM48533.1| 783|Caenorhabditis elegans Hypothetical
protein F54D8.6 protein.
Length = 783
Score = 27.5 bits (58), Expect = 5.7
Identities = 8/29 (27%), Positives = 19/29 (65%)
Frame = +3
Query: 93 VVNKSLITFVNKHLGKLHLEVMDLETQFH 179
+ N ++ +NK +GK+ + +MD++ + H
Sbjct: 728 ISNTTVKDTINKDMGKMEIHIMDMKAKMH 756
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,447,713
Number of Sequences: 27780
Number of extensions: 142681
Number of successful extensions: 442
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 419
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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