Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_G12
         (395 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5B767 Cluster: Putative uncharacterized protein; n=1; ...    33   2.0  
UniRef50_Q98RS6 Cluster: U5 small nuclear ribonucleoprotein 116 ...    32   3.5  
UniRef50_A5K0J7 Cluster: ABC transporter, putative; n=5; Plasmod...    32   3.5  
UniRef50_Q4FN76 Cluster: Putative uncharacterized protein; n=2; ...    32   4.6  
UniRef50_Q9N0C9 Cluster: Unnamed protein product; n=1; Macaca fa...    31   6.1  

>UniRef50_A5B767 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 183

 Score = 33.1 bits (72), Expect = 2.0
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = -3

Query: 255 LCDSNRFRFNFCDNYPPFTSC*FSTPLPIILFRNHKL 145
           LC SN  + +F  N+   +SC F TPLP  L  N KL
Sbjct: 7   LCSSNSSKPHFIFNFNHSSSCQFLTPLPTKLLINSKL 43


>UniRef50_Q98RS6 Cluster: U5 small nuclear ribonucleoprotein 116 kDa
           subunit; n=1; Guillardia theta|Rep: U5 small nuclear
           ribonucleoprotein 116 kDa subunit - Guillardia theta
           (Cryptomonas phi)
          Length = 827

 Score = 32.3 bits (70), Expect = 3.5
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +3

Query: 18  SNSQMLSSRYNYLERDFIKYKKYFILGT*IFLVLIYLINL 137
           SNS      +N + + F K KK  I  T +F VLI+L+NL
Sbjct: 729 SNSYFCHKMFNNILKKFTKNKKKIIKKTCLFEVLIHLVNL 768


>UniRef50_A5K0J7 Cluster: ABC transporter, putative; n=5;
           Plasmodium|Rep: ABC transporter, putative - Plasmodium
           vivax
          Length = 1111

 Score = 32.3 bits (70), Expect = 3.5
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +2

Query: 23  FTNAVEPL*LSGTRFHKI*KIFHIRYLNIFSSYILDKFVYGSLWLRNKIIGNG 181
           FTN +  +  +GT++  I    H  +++I S ++L    YG+  + NK I  G
Sbjct: 435 FTNYLNEVYKAGTKYSLIKAGNHFLFVSIISLFLLHLIYYGNYLIANKYINTG 487


>UniRef50_Q4FN76 Cluster: Putative uncharacterized protein; n=2;
           Candidatus Pelagibacter ubique|Rep: Putative
           uncharacterized protein - Pelagibacter ubique
          Length = 562

 Score = 31.9 bits (69), Expect = 4.6
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = -3

Query: 255 LCDSNRFRFNFCDNYPPFTSC*FSTPLPIILFRNHKLPYTNLSS 124
           L D  ++ FN  D+   F S  FS     IL++  KL Y NLSS
Sbjct: 57  LVDQGKYSFNLIDDTYVFISTFFSFIQNFILYKIFKLNYLNLSS 100


>UniRef50_Q9N0C9 Cluster: Unnamed protein product; n=1; Macaca
           fascicularis|Rep: Unnamed protein product - Macaca
           fascicularis (Crab eating macaque) (Cynomolgus monkey)
          Length = 55

 Score = 31.5 bits (68), Expect = 6.1
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +2

Query: 278 PIWPLHLIIIYLLALCPLWVVCQTVPTLTAL 370
           P W ++ +++  + LCP WV C+   TL ++
Sbjct: 7   PYWNINSVMVETMLLCPPWVACRRCWTLPSI 37


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 360,527,605
Number of Sequences: 1657284
Number of extensions: 6248201
Number of successful extensions: 14390
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14389
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16503508437
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)