Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_G10
(553 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156; Eukar... 310 1e-83
UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38; Euka... 264 9e-70
UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25; Euka... 260 1e-68
UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal ... 239 4e-62
UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, wh... 184 2e-45
UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1; ... 155 5e-37
UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20; Archae... 151 1e-35
UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1; Archaeo... 147 1e-34
UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1; Nanoarc... 143 2e-33
UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 142 5e-33
UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga m... 139 5e-32
UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7; Euryarc... 138 6e-32
UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1; Methanobrev... 132 5e-30
UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3; Methano... 132 5e-30
UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6; Methano... 132 7e-30
UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2; environm... 128 1e-28
UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus N... 126 3e-28
UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5; Halobac... 124 2e-27
UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum ... 122 4e-27
UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4; Thermop... 121 1e-26
UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiell... 104 2e-21
UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n... 87 3e-16
UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamb... 73 3e-12
UniRef50_Q9HWE7 Cluster: 50S ribosomal protein L5; n=187; Bacter... 64 3e-09
UniRef50_Q7VQD6 Cluster: 50S ribosomal protein L5; n=4; Bacteria... 62 8e-09
UniRef50_P38517 Cluster: 50S ribosomal protein L5; n=18; cellula... 60 3e-08
UniRef50_Q6A6N8 Cluster: 50S ribosomal protein L5; n=125; Bacter... 58 1e-07
UniRef50_A6PPX3 Cluster: 50S ribosomal protein L5; n=1; Victival... 56 4e-07
UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3; Bacteria... 56 5e-07
UniRef50_Q6AP59 Cluster: 50S ribosomal protein L5; n=77; Bacteri... 52 1e-05
UniRef50_Q6YR10 Cluster: 50S ribosomal protein L5; n=22; Bacteri... 51 2e-05
UniRef50_Q6B8W5 Cluster: Chloroplast 50S ribosomal protein L5; n... 50 3e-05
UniRef50_Q1ACG2 Cluster: Chloroplast 50S ribosomal protein L5; n... 50 3e-05
UniRef50_A5CCK0 Cluster: 50S ribosomal protein L5; n=1; Orientia... 50 4e-05
UniRef50_P73308 Cluster: 50S ribosomal protein L5; n=227; cellul... 50 4e-05
UniRef50_A5KRR2 Cluster: 50S ribosomal protein L5; n=1; candidat... 48 1e-04
UniRef50_O04603 Cluster: 50S ribosomal protein L5, chloroplast p... 48 1e-04
UniRef50_Q9G893 Cluster: Ribosomal protein L5; n=1; Malawimonas ... 47 3e-04
UniRef50_Q2GEC7 Cluster: 50S ribosomal protein L5; n=1; Neoricke... 46 6e-04
UniRef50_Q42196 Cluster: 60S ribosomal protein L11; n=1; Arabido... 45 0.001
UniRef50_P56033 Cluster: 50S ribosomal protein L5; n=6; Bacteria... 45 0.001
UniRef50_O21252 Cluster: Mitochondrial 60S ribosomal protein L5;... 44 0.002
UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2; Epsilonp... 44 0.002
UniRef50_Q6KI43 Cluster: 50S ribosomal protein L5; n=12; Bacteri... 44 0.003
UniRef50_A3GUR6 Cluster: 50S ribosomal protein L5; n=1; Vibrio c... 43 0.004
UniRef50_P49547 Cluster: Chloroplast 50S ribosomal protein L5; n... 43 0.004
UniRef50_Q2EEW3 Cluster: Ribosomal protein L5; n=1; Helicosporid... 42 0.007
UniRef50_A7CZB2 Cluster: Ribosomal protein L5; n=1; Opitutaceae ... 41 0.017
UniRef50_A7P1Q7 Cluster: Chromosome chr19 scaffold_4, whole geno... 40 0.029
UniRef50_Q8EUX5 Cluster: Putative uncharacterized protein MYPE79... 38 0.15
UniRef50_Q9MAT2 Cluster: F13M7.17; n=1; Arabidopsis thaliana|Rep... 37 0.36
UniRef50_P33515 Cluster: Genome polyprotein [Contains: Capsid pr... 36 0.47
UniRef50_P46749 Cluster: Mitochondrial 60S ribosomal protein L5;... 36 0.63
UniRef50_Q9LQE5 Cluster: F15O4.40; n=2; Arabidopsis thaliana|Rep... 35 1.1
UniRef50_Q9G4D4 Cluster: Ribosomal protein L5; n=1; Thraustochyt... 35 1.1
UniRef50_A1RXI7 Cluster: Methyltransferase type 11; n=1; Thermof... 35 1.1
UniRef50_Q7XWI0 Cluster: OSJNBa0085C10.14 protein; n=25; Oryza s... 34 1.9
UniRef50_Q5DZU7 Cluster: Putative uncharacterized protein; n=1; ... 34 2.5
UniRef50_Q589Y5 Cluster: Serine protease; n=3; Obtectomera|Rep: ... 34 2.5
UniRef50_A2QJZ2 Cluster: Putative uncharacterized protein; n=1; ... 34 2.5
UniRef50_Q5LMB1 Cluster: Putative uncharacterized protein; n=1; ... 33 3.3
UniRef50_Q0DC29 Cluster: Os06g0493000 protein; n=8; Eukaryota|Re... 33 3.3
UniRef50_A6D0I6 Cluster: Putative uncharacterized protein; n=1; ... 33 4.4
UniRef50_UPI0000EBD5F1 Cluster: PREDICTED: hypothetical protein;... 33 5.8
UniRef50_A7HKR2 Cluster: Putative uncharacterized protein; n=1; ... 33 5.8
UniRef50_A0RPV7 Cluster: Wbgx protein; n=3; Campylobacter|Rep: W... 33 5.8
UniRef50_Q2R3R6 Cluster: Transposon protein, putative, Pong sub-... 33 5.8
UniRef50_Q898I3 Cluster: Predicted transglutaminase/protease; n=... 32 7.7
UniRef50_A7A6S7 Cluster: Putative uncharacterized protein; n=1; ... 32 7.7
UniRef50_Q0J370 Cluster: Os09g0251100 protein; n=5; Oryza sativa... 32 7.7
>UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156;
Eukaryota|Rep: 60S ribosomal protein L11 - Homo sapiens
(Human)
Length = 178
Score = 310 bits (762), Expect = 1e-83
Identities = 143/164 (87%), Positives = 156/164 (95%)
Frame = +3
Query: 57 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 236
MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKIAVH
Sbjct: 12 MRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVH 71
Query: 237 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 416
CTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGLDFY
Sbjct: 72 CTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 131
Query: 417 VVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIIL 548
VVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDGIIL
Sbjct: 132 VVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
>UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38;
Eukaryota|Rep: 60S ribosomal protein L11-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 182
Score = 264 bits (647), Expect = 9e-70
Identities = 125/165 (75%), Positives = 142/165 (86%)
Frame = +3
Query: 57 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 236
MR++ ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYTVRSFGIRRNEKIA +
Sbjct: 11 MRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACY 70
Query: 237 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 416
TVRG KA ++LE GLKV+EYEL R NFS TG FGFGIQEHIDLGIKYDPS GIYG+DFY
Sbjct: 71 VTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFY 130
Query: 417 VVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILN 551
VVL RPG+ VA RRR +VG HR+TK+DAMKWFQ KY+G+ILN
Sbjct: 131 VVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILN 175
>UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25;
Eukaryota|Rep: 60S ribosomal protein L11-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 174
Score = 260 bits (638), Expect = 1e-68
Identities = 124/165 (75%), Positives = 139/165 (84%)
Frame = +3
Query: 57 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 236
MR+L I KL LNI VGESGDRLTRA+KVLEQL+GQ PV SKARYTVR+FGIRRNEKIAVH
Sbjct: 9 MRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNEKIAVH 68
Query: 237 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 416
TVRG KAEEILERGLKV+EY+LR NFSATGNFGFGI EHIDLGIKYDPSIGI+G+DFY
Sbjct: 69 VTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIFGMDFY 128
Query: 417 VVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILN 551
VV+ RPG V R+R G VG H+ TKED + WF+QKYD +L+
Sbjct: 129 VVMNRPGARVTRRKRCKGTVGNSHKTTKEDTVSWFKQKYDADVLD 173
>UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal
protein L11; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L11 - Mus musculus
Length = 279
Score = 239 bits (584), Expect = 4e-62
Identities = 109/132 (82%), Positives = 123/132 (93%)
Frame = +3
Query: 153 TGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATG 332
+GQ PV SKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILE+GLKVREYELR++NFS TG
Sbjct: 98 SGQAPVESKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTG 157
Query: 333 NFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAM 512
NFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR GF++A ++R+TG +G HR++KE+AM
Sbjct: 158 NFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRSGFSIADKKRRTGCIGAKHRISKEEAM 217
Query: 513 KWFQQKYDGIIL 548
+WFQQKY GIIL
Sbjct: 218 RWFQQKYAGIIL 229
>UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_51,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 184 bits (447), Expect = 2e-45
Identities = 86/142 (60%), Positives = 108/142 (76%)
Frame = +3
Query: 54 VMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAV 233
VMR + I KL ++IC GESGD+LT+AAKVLE LTGQ+PVF KARYTVRSFGIRRNEKI+V
Sbjct: 38 VMRKIRIEKLMVHICAGESGDKLTKAAKVLEDLTGQKPVFGKARYTVRSFGIRRNEKISV 97
Query: 234 HCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDF 413
CT+RG +A +IL RGL+V+E EL++ NFS +GNFGFGIQEHIDLG+KYDP GI+
Sbjct: 98 FCTIRGDQARDILVRGLRVKEMELKKRNFSESGNFGFGIQEHIDLGLKYDPYTGIFRYGL 157
Query: 414 YVVLGRPGFNVAHRRRKTGKVG 479
+ + ++ K K+G
Sbjct: 158 LCCVVKTRIESCSKKIKKFKIG 179
>UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L5P - Ignicoccus hospitalis KIN4/I
Length = 198
Score = 155 bits (377), Expect = 5e-37
Identities = 71/155 (45%), Positives = 109/155 (70%), Gaps = 1/155 (0%)
Frame = +3
Query: 72 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRG 251
+ K+ +NI +GESG+RL +A +LE+LTGQ+PV KA+ T+R FGIRR E IAV T+RG
Sbjct: 38 LAKVTVNIALGESGERLEKAYNLLEELTGQRPVKRKAKKTIRQFGIRRGENIAVMVTLRG 97
Query: 252 AKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLG 428
+A E L++ L+ ++++ +F GN GFGI+EHI + G +YDP +GI+G+D + +
Sbjct: 98 QRAVEFLKKALEAVGWKIKASSFDEFGNVGFGIREHIQIPGTRYDPRVGIFGMDVILTIE 157
Query: 429 RPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKY 533
RPG+ VA RRR K+ HR+TKE++M + +++
Sbjct: 158 RPGYRVARRRRARSKIPRRHRVTKEESMVFLAKEF 192
>UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20;
Archaea|Rep: 50S ribosomal protein L5P - Aeropyrum
pernix
Length = 192
Score = 151 bits (365), Expect = 1e-35
Identities = 73/161 (45%), Positives = 106/161 (65%), Gaps = 2/161 (1%)
Frame = +3
Query: 57 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 236
MR I K+ +NI +G+SG+RL RAA+VLE+LTGQ+PVF KA+ T+R+FG+R+ E IAV
Sbjct: 27 MRRPRIVKVTVNISIGQSGERLQRAAEVLEELTGQKPVFRKAKRTIRAFGVRKGENIAVM 86
Query: 237 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 413
T+RG KA L+R L + ++ + GN FGI+EHI + G+KYDP +GI G+D
Sbjct: 87 VTLRGEKALNFLKRALDAVGHRIKTSSIDEHGNVSFGIEEHILIPGVKYDPRVGILGMDV 146
Query: 414 YVVLGRPGFNVAHRRR-KTGKVGFPHRLTKEDAMKWFQQKY 533
+ + RPG + RRR + G + HR+T+E+ M Q +
Sbjct: 147 AITIQRPGHRIVERRRQRRGHIPRRHRVTREETMVLLNQLF 187
>UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L5P -
Archaeoglobus fulgidus
Length = 178
Score = 147 bits (357), Expect = 1e-34
Identities = 72/157 (45%), Positives = 103/157 (65%), Gaps = 1/157 (0%)
Frame = +3
Query: 57 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 236
MR + + K+ +NI VGESG+R +A +LE+L Q+P + A+ T+++FGIR+ E I +
Sbjct: 16 MREVVLDKVVINIGVGESGERHKKAYSLLEELVEQKPAITYAKMTIKNFGIRKGEAIGIK 75
Query: 237 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 413
T+RG KA + L+ L V+E L R + G F FGI EHIDL G+ YDP +GI+G+D
Sbjct: 76 VTLRGEKALKFLKDALTVKENRLSRKSI-GEGYFAFGIAEHIDLPGVDYDPDVGIFGMDV 134
Query: 414 YVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQ 524
V L R G+ VA RRRK K+ HR+TKED ++W +
Sbjct: 135 CVSLKRRGYRVARRRRKKAKIATSHRVTKEDTIRWLE 171
>UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L5P -
Nanoarchaeum equitans
Length = 169
Score = 143 bits (347), Expect = 2e-33
Identities = 75/160 (46%), Positives = 109/160 (68%), Gaps = 2/160 (1%)
Frame = +3
Query: 57 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 236
MR + I K+ LNI VGESG++L +A ++L++LTGQ+PV +KA+ V + IR I V
Sbjct: 5 MRKIRIEKVTLNIGVGESGEKLDKAYELLKRLTGQKPVKTKAKVRVEQWHIRPGLPIGVK 64
Query: 237 CTVRGAKAEEIL-ERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLD 410
T+RG KA +IL E+ L +++++ +F+ G FGFGI E+I + G+KYDP +G+ GL+
Sbjct: 65 VTLRGEKAYKILKEKLLPAVDFKIKASSFTDRG-FGFGIPEYIMIPGMKYDPELGLIGLE 123
Query: 411 FYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQK 530
YV L RPG+ V RR K KVG HRL KE+ +KW Q++
Sbjct: 124 AYVTLERPGYRVERRRIKRSKVGSRHRLNKEEIIKWAQEE 163
>UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 191
Score = 142 bits (344), Expect = 5e-33
Identities = 71/167 (42%), Positives = 109/167 (65%)
Frame = -3
Query: 551 VQDYTIVFLLKPLHGVFFCQTMGESNFASLTSSMSYIETWSTKNNVEIQTIDTNRWIIFD 372
VQ+++IV LL+P GVF + ++F + S TWST +NVEI T++T+ W++ D
Sbjct: 6 VQNFSIVSLLEPSDGVFLGSLVRVTDFRLTSLSSGDSGTWSTHDNVEIHTVNTDTWVVLD 65
Query: 371 TQIDVFLDTKAKVACGREVITSQFIFSYFQSSLKDFLSLSTSNSAMDSNLFITTNTKRPY 192
TQIDVFLDT+ +V REV SQ +F Q+S +DF SL T+NS +DSNLF++++T+
Sbjct: 66 TQIDVFLDTETEVTGSREVSVSQLVFLDLQTSFQDFFSLWTTNSNVDSNLFVSSDTESSD 125
Query: 191 SVSGL*EYRLLAGKLFQHLSGTS*PITRFSDTDVQAEFSDMKIPHNI 51
SVS L L +LFQ+L + +TRF++ ++Q +F D++ H +
Sbjct: 126 SVSSLGLNWSLTRQLFQNLGSSGQSVTRFTNRNIQDQFLDLQFTHRV 172
>UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L5 -
Caldivirga maquilingensis IC-167
Length = 197
Score = 139 bits (336), Expect = 5e-32
Identities = 68/157 (43%), Positives = 105/157 (66%), Gaps = 1/157 (0%)
Frame = +3
Query: 57 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 236
MR + I + +N+ +G+SG+RL +AAKV+ +LTG+ P + A +++ FGIRR E I +
Sbjct: 32 MRRIFIWSVAVNMGIGQSGERLEKAAKVMSELTGRTPSYRLAHKSIKDFGIRRGEPIGLL 91
Query: 237 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 413
T+R +A L R L ++ LR ++F+A GN FGI+EHI + G +YDP++GI+G D
Sbjct: 92 VTLRRNEAVWFLLRALAAVDFTLREESFNA-GNVSFGIREHILVPGSRYDPALGIFGFDV 150
Query: 414 YVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQ 524
V L RPGF V +RRR VG HR+++E+ +++FQ
Sbjct: 151 AVTLARPGFRVQYRRRARADVGKDHRVSREETIRFFQ 187
>UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L5P -
Methanococcus maripaludis
Length = 181
Score = 138 bits (335), Expect = 6e-32
Identities = 72/164 (43%), Positives = 101/164 (61%), Gaps = 4/164 (2%)
Frame = +3
Query: 57 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 236
M+ I+K+ +N VGE+GDRLT AKV+E+LTGQ PV + A+ T +FGIR+ I +
Sbjct: 12 MKKPRIQKVTVNFGVGEAGDRLTIGAKVIEELTGQSPVRTLAKQTNPAFGIRKKLPIGLK 71
Query: 237 CTVRGAKAEEILER---GLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYG 404
T+RG KAEE L+ K L +F GNF FG+ EHID G KYDPS+GIYG
Sbjct: 72 VTLRGKKAEEFLKNAFTAFKACGKTLFASSFDQVGNFSFGVPEHIDFPGQKYDPSVGIYG 131
Query: 405 LDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYD 536
+D V + G+ V R+ K + H +TK++A+++ Q K+D
Sbjct: 132 MDICVTFEKSGYRVKSRKVKRSHIPEKHLVTKDEAIEYIQAKFD 175
>UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Ribosomal
protein L5p - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 170
Score = 132 bits (319), Expect = 5e-30
Identities = 64/161 (39%), Positives = 103/161 (63%), Gaps = 1/161 (0%)
Frame = +3
Query: 57 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 236
M + I K ++I VGE+G++L+RA +LEQ+ Q PV + ++ T FGIR+ + IA
Sbjct: 4 MNEVQISKATVSIGVGEAGEKLSRAITLLEQMFDQTPVKTFSKVTNPEFGIRKRQPIACK 63
Query: 237 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 413
T+RG KA++ +E L+ ++ F A GN FGI+EHID+ G+KY+P IGI+G++
Sbjct: 64 LTLRGEKADKAIEMVLEGINKNIKPTQFDAQGNLSFGIKEHIDIPGMKYNPDIGIFGMNV 123
Query: 414 YVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYD 536
V +PG+ +A RR + KV HR++KE+ MK+ + ++
Sbjct: 124 SVTFEKPGYRIAKRRIQQKKVPAKHRISKEETMKYMEDNFN 164
>UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina barkeri (strain Fusaro / DSM 804)
Length = 169
Score = 132 bits (319), Expect = 5e-30
Identities = 65/161 (40%), Positives = 99/161 (61%), Gaps = 1/161 (0%)
Frame = +3
Query: 54 VMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAV 233
VMR + K+ +++ VGESG L A ++L +TGQ+ V A+ T+ +F I++NE I
Sbjct: 4 VMRTPVVEKVIVHMGVGESGQHLVDAEEILRNITGQEVVRCFAKRTLPAFSIKKNEPIGC 63
Query: 234 HCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLD 410
T+RG +A++ LE L + + L R F + GN FGI+EH D G+KYDP+IG++G+D
Sbjct: 64 KVTLRGQRAQQFLETALGIVDKTLVRSQFDSLGNVSFGIEEHTDFPGMKYDPNIGVFGMD 123
Query: 411 FYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKY 533
VV+ RPG + RR T K+ HR+T ED++ + Y
Sbjct: 124 VTVVIKRPGERICKRRIATRKIPTNHRVTLEDSIAFLNDSY 164
>UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 169
Score = 132 bits (318), Expect = 7e-30
Identities = 64/160 (40%), Positives = 99/160 (61%), Gaps = 1/160 (0%)
Frame = +3
Query: 57 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 236
MR + K+ +++ VGESG L A ++L+ +TGQ+ V A+ T+ +F I++NE I
Sbjct: 5 MRTPMVEKVIVHMGVGESGQHLVNAEEILKTITGQEVVRCFAKRTLPAFSIKKNEPIGCK 64
Query: 237 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 413
T+RG +A+E L ++ E L R F + GN FGI+EH D G++YDP+IG++G+D
Sbjct: 65 VTLRGQRAQEFLGTSFEIIEKTLSRAQFDSLGNVSFGIEEHTDFPGMRYDPNIGVFGMDV 124
Query: 414 YVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKY 533
VVL RPG + RR T K+ HR+T +DA+ + + Y
Sbjct: 125 TVVLKRPGERICKRRIATRKIPTDHRVTVDDAIAFLNESY 164
>UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2;
environmental samples|Rep: Ribosomal protein L5/L11 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 168
Score = 128 bits (308), Expect = 1e-28
Identities = 69/156 (44%), Positives = 92/156 (58%), Gaps = 2/156 (1%)
Frame = +3
Query: 72 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRG 251
I K+ +NI VGE G RL A +VLE LTG +P+ + +R T R G R I T+R
Sbjct: 6 ITKVTVNIGVGEGGSRLQLAERVLELLTGLKPIRTISRMTNRDLGTRLGAPIGCKVTIRD 65
Query: 252 A-KAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGI-KYDPSIGIYGLDFYVVL 425
A K + L+ VRE L NF +GN FGI ++ D KYDP IGIYG+D VVL
Sbjct: 66 ADKVQSFLKDAFWVRENTLPSYNFDQSGNLSFGIADYTDFPAQKYDPDIGIYGMDVNVVL 125
Query: 426 GRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKY 533
RPG V+ RRR+ KVG HR+ K+++ WF+ ++
Sbjct: 126 ERPGHRVSRRRRRGVKVGVEHRVGKDESKAWFKDQF 161
>UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 173
Score = 126 bits (304), Expect = 3e-28
Identities = 61/160 (38%), Positives = 100/160 (62%), Gaps = 1/160 (0%)
Frame = +3
Query: 57 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 236
M+ + + K+ LN+ VG+SGD + A++ LEQ++G++P A+ T R +G+R+ E I V
Sbjct: 9 MKKISLEKVVLNMGVGKSGDVIEIASRALEQISGKKPSARNAKETQRDWGVRKGEPIGVA 68
Query: 237 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 413
T+RG A+ +L+R L+ + + F GN+ FGI+EHID+ G+KY+PSIGI GL
Sbjct: 69 VTIRGDDAKALLKRLLEAKGNTVNGRAFDNFGNYSFGIREHIDIPGVKYEPSIGILGLGI 128
Query: 414 YVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKY 533
V L RPG+ + R + VG H +T ++A + +++
Sbjct: 129 SVTLTRPGYGIRTRSKHKASVGKSHIITSQEAKDYLVKEF 168
>UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 124 bits (298), Expect = 2e-27
Identities = 66/161 (40%), Positives = 91/161 (56%), Gaps = 1/161 (0%)
Frame = +3
Query: 57 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 236
MR I K+ +++ +G G L A +L ++TGQ PV +KA+ TV F IR + I
Sbjct: 14 MREPRIEKVVVHMGIGHGGRDLANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAK 73
Query: 237 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 413
T+R AEE L+ L + EL F TGNF FG++EH + +YDPSIGIYGLD
Sbjct: 74 VTLRDEMAEEFLQTALPLA--ELATSQFDDTGNFSFGVEEHTEFPSQEYDPSIGIYGLDV 131
Query: 414 YVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYD 536
V L RPG+ VA R + + + HRL DA+ + + YD
Sbjct: 132 TVNLVRPGYRVAKRDKASRSIPTKHRLNPADAVAFIESTYD 172
>UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L5 - Cenarchaeum
symbiosum
Length = 169
Score = 122 bits (295), Expect = 4e-27
Identities = 60/160 (37%), Positives = 95/160 (59%), Gaps = 1/160 (0%)
Frame = +3
Query: 57 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 236
MR + + K+ LN+ VG+SG+ + A + L +++G++P A T R FG+R+ E I
Sbjct: 5 MRKITLEKVVLNMGVGQSGNAVEVAKRALGEISGKKPCGRDAHETQRDFGVRKGEPIGAA 64
Query: 237 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 413
T+RG A + R + + +++ +F GNF FGI EHID+ GIKYDP IGI GLD
Sbjct: 65 VTIRGEDAGALARRLFEAKGGQVKGRSFDDFGNFSFGIGEHIDIPGIKYDPGIGILGLDV 124
Query: 414 YVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKY 533
+ L RPG+ + R + +VG HR+T +A + +++
Sbjct: 125 CMTLSRPGYGIRKRSKHKARVGRSHRITATEAKDFVVREF 164
>UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L5P -
Picrophilus torridus
Length = 176
Score = 121 bits (292), Expect = 1e-26
Identities = 64/162 (39%), Positives = 97/162 (59%), Gaps = 2/162 (1%)
Frame = +3
Query: 57 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 236
MR + I K+ +NI VG +G+RL RAAKVLE LT +P F+ A+ TVR F IR+ I V
Sbjct: 9 MREIVIDKVVVNIGVGAAGERLNRAAKVLELLTHHKPAFTSAKRTVRDFNIRKGLNIGVK 68
Query: 237 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 413
T+R A L+ ++Y++ +F GN FGI ++ D G+KYDP IGI+G+D
Sbjct: 69 VTLRKDDALSFLKEAFYAKDYKIPVYSFDKNGNAYFGISDYTDFKGMKYDPDIGIFGMDI 128
Query: 414 YVVL-GRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYD 536
+V R G+ + RR K + R++KE+ +K+ Q+ ++
Sbjct: 129 AIVFRRRGGYRIEKRRIKKMHIPKKMRISKEETIKYLQENFN 170
>UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiella
natans|Rep: Ribosomal protein L11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 104 bits (249), Expect = 2e-21
Identities = 48/139 (34%), Positives = 84/139 (60%)
Frame = +3
Query: 57 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 236
M+ + + KL L+I VG SG L +++K+L++++ Q P F A+ T+++F IRR E I+
Sbjct: 1 MKQIFLNKLILSIDVGSSGSNLYKSSKLLKKISLQFPSFGMAKRTIKTFSIRRGEYISCF 60
Query: 237 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 416
C++ K L + LK++ + + NFS T FG GI +H++LG +D IGI+G++
Sbjct: 61 CSLSKKKGILFLYKMLKLKTFTINESNFSLTSTFGIGISDHLELGYNFDQKIGIHGINII 120
Query: 417 VVLGRPGFNVAHRRRKTGK 473
L R G+ + ++ + K
Sbjct: 121 GDLSRRGYRIKLKKEQDPK 139
>UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 363
Score = 87.0 bits (206), Expect = 3e-16
Identities = 51/172 (29%), Positives = 92/172 (53%), Gaps = 1/172 (0%)
Frame = -3
Query: 551 VQDYTIVFLLKPLHGVFFCQTMGESNFASLTSSMSYIETWSTKNNVEIQTIDTNRWIIFD 372
VQD + LL+P H + + + ++ L + + +++VEI T+D ++ D
Sbjct: 35 VQDDALERLLEPSHRISLGKLVLLTDLLLLLTPAVDSVARALQHDVEIHTVDPCGRVVLD 94
Query: 371 TQIDVFLDTKAKVACGREVITSQFIFSYFQSSLKDFLSL-STSNSAMDSNLFITTNTKRP 195
+++VF DT+ +V G EV +F F + + +L++ L +N + +LF+T N +R
Sbjct: 95 AEVNVFADTETEVTRGAEVALEEFEFLHLEPALQNLHRLVPVTNGDVRGDLFVTANAERA 154
Query: 194 YSVSGL*EYRLLAGKLFQHLSGTS*PITRFSDTDVQAEFSDMKIPHNIFRIV 39
+ V+ L E RLL G+L QHL IT ++ +V+ E + PH + R+V
Sbjct: 155 HGVARLGEDRLLTGQLLQHLRRLREAITALANANVEHELVNADRPHRVLRLV 206
>UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_81_173473_174138 - Giardia lamblia
ATCC 50803
Length = 221
Score = 73.3 bits (172), Expect = 3e-12
Identities = 45/168 (26%), Positives = 80/168 (47%)
Frame = -3
Query: 542 YTIVFLLKPLHGVFFCQTMGESNFASLTSSMSYIETWSTKNNVEIQTIDTNRWIIFDTQI 363
+ + L P G+ M +N L ++ E + K++VE+ TIDT+ ++ D +I
Sbjct: 37 HNLELTLNPGTGLIRGYLMRRTNVLLLCPALIDAEPGARKDHVEVHTIDTHGRVVLDPEI 96
Query: 362 DVFLDTKAKVACGREVITSQFIFSYFQSSLKDFLSLSTSNSAMDSNLFITTNTKRPYSVS 183
+VF D + +V+ G E QF +++L D L +N + +L + + +
Sbjct: 97 NVFRDAEPEVSSGGEARVGQFKVLDAEAALDDLAGLFAANGDVCGDLLTAADPEAADGEA 156
Query: 182 GL*EYRLLAGKLFQHLSGTS*PITRFSDTDVQAEFSDMKIPHNIFRIV 39
L E RLL G+L + LS + SD DV+ E + PH + ++
Sbjct: 157 RLGERRLLVGELLEDLSSLCQRVALSSDADVEDELLNADTPHGVLTLL 204
>UniRef50_Q9HWE7 Cluster: 50S ribosomal protein L5; n=187;
Bacteria|Rep: 50S ribosomal protein L5 - Pseudomonas
aeruginosa
Length = 179
Score = 63.7 bits (148), Expect = 3e-09
Identities = 45/129 (34%), Positives = 69/129 (53%), Gaps = 10/129 (7%)
Frame = +3
Query: 54 VMRNLHIRKLCLNICVGES-GDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEK 224
VM + K+ LN+ +GE+ GD+ + A LE++TGQ+PV + AR ++ F IR
Sbjct: 25 VMEVPRVTKITLNMGLGEAVGDKKIIENAVADLEKITGQKPVVTYARKSIAGFKIREGWP 84
Query: 225 IAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKYD 383
I V T+R + E L+R L +VR++ L +F GN+ G++E I I YD
Sbjct: 85 IGVKVTLRSDRMYEFLDRLLSISLPRVRDFRGLNAKSFDGRGNYSMGVKEQIIFPEIDYD 144
Query: 384 PSIGIYGLD 410
+ GLD
Sbjct: 145 KIDALRGLD 153
>UniRef50_Q7VQD6 Cluster: 50S ribosomal protein L5; n=4;
Bacteria|Rep: 50S ribosomal protein L5 - Blochmannia
floridanus
Length = 190
Score = 62.1 bits (144), Expect = 8e-09
Identities = 44/132 (33%), Positives = 73/132 (55%), Gaps = 10/132 (7%)
Frame = +3
Query: 54 VMRNLHIRKLCLNICVGES---GDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEK 224
VM+ I K+ +++ VG+S L RA + LE ++GQ+PV +KAR ++ SF IR+ ++
Sbjct: 25 VMQVPKINKITISMGVGKSIINKKFLERAIEDLEMISGQKPVITKARKSIASFKIRQGQE 84
Query: 225 IAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKYD 383
I T+R + E ER + ++R++ L +F GN+ GI+E I I YD
Sbjct: 85 IGCKVTLRRKRMWEFFERLISIAIPRIRDFRGLSIKSFDGYGNYTMGIREQIIFPEINYD 144
Query: 384 PSIGIYGLDFYV 419
GI G++ +
Sbjct: 145 TIDGIRGMNITI 156
>UniRef50_P38517 Cluster: 50S ribosomal protein L5; n=18; cellular
organisms|Rep: 50S ribosomal protein L5 - Thermotoga
maritima
Length = 184
Score = 60.1 bits (139), Expect = 3e-08
Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
Frame = +3
Query: 78 KLCLNICVGESG---DRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVR 248
K+ +N+ +GE D + R A L ++TGQ+P+ ++AR ++ +F IR+ I + T+R
Sbjct: 37 KIVINMGIGEGSRNYDLIERHANELAKITGQKPIVTRARKSISNFKIRKGMPIGLKVTLR 96
Query: 249 GAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 407
GA+ L + + KVR++ L ++F GN+ FG+ E + + D I G+
Sbjct: 97 GARMYNFLYKLINIVLPKVRDFRGLDPNSFDGRGNYSFGLSEQLVFPELNPDEVRRIQGM 156
Query: 408 DFYVV 422
D +V
Sbjct: 157 DITIV 161
>UniRef50_Q6A6N8 Cluster: 50S ribosomal protein L5; n=125;
Bacteria|Rep: 50S ribosomal protein L5 -
Propionibacterium acnes
Length = 210
Score = 58.0 bits (134), Expect = 1e-07
Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 10/127 (7%)
Frame = +3
Query: 72 IRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 242
+ K+ +N+ VG++ + A + + +TGQ+P +KAR ++ F +R + I H T
Sbjct: 40 LEKIVVNMGVGDAAHDSKVMDGAIRDITAITGQKPQVTKARKSIAQFKLREGQPIGCHVT 99
Query: 243 VRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHI-DLGIKYDPSIGIY 401
+RG + E +R L ++R++ L + F GN+ FG+ E + L I D + I
Sbjct: 100 LRGDRMWEFADRLLTLALPRIRDFRGLNSNQFDGKGNYTFGLSEQVMFLEIDQDKIVRIR 159
Query: 402 GLDFYVV 422
G+D V
Sbjct: 160 GMDITFV 166
>UniRef50_A6PPX3 Cluster: 50S ribosomal protein L5; n=1; Victivallis
vadensis ATCC BAA-548|Rep: 50S ribosomal protein L5 -
Victivallis vadensis ATCC BAA-548
Length = 178
Score = 56.4 bits (130), Expect = 4e-07
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 8/109 (7%)
Frame = +3
Query: 54 VMRNLHIRKLCLNICVGESGDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 227
VM+ + K+ ++ +G +R T A K + +TGQ+PV +KAR V +F +R +
Sbjct: 25 VMQIPKLEKIVISTGIGSDAERDAFTEAKKHIGAMTGQEPVITKARKNVSNFKLRVGMPV 84
Query: 228 AVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQE 356
V T+RG++ E L+R + +VR++ + + F GN+ GI +
Sbjct: 85 GVMVTLRGSRMYEFLDRFVHNALPRVRDFRGIPKTGFDGVGNYNLGISD 133
>UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3;
Bacteria|Rep: 50S ribosomal protein L5 - Pelagibacter
ubique
Length = 184
Score = 56.0 bits (129), Expect = 5e-07
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Frame = +3
Query: 72 IRKLCLNICVGESGD--RLTRAAKV-LEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 242
+ K+ +N+ +G G ++ ++ + L ++TGQ+P +K + +V +F R+ + T
Sbjct: 32 VEKVVINMGLGLDGADAKIMKSTEEDLGKITGQKPTVTKFKKSVANFKTRKGTNAGLKVT 91
Query: 243 VRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIY 401
+RG K E L+R + +++++ L F GN+ FGI+EHI + +D I
Sbjct: 92 LRGNKMYEFLDRLVNIALPRIKDFRGLSPKGFDKFGNYTFGIKEHIIFPEVNFDRIDKIR 151
Query: 402 GLDFYVVLGRPGFNVAHRRRKTGKVGFP 485
GLD VV+ N H K+ FP
Sbjct: 152 GLDIVVVIS--ALNKDHSFALLEKLNFP 177
>UniRef50_Q6AP59 Cluster: 50S ribosomal protein L5; n=77;
Bacteria|Rep: 50S ribosomal protein L5 - Desulfotalea
psychrophila
Length = 179
Score = 51.6 bits (118), Expect = 1e-05
Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Frame = +3
Query: 72 IRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 242
I K+ LN+ +GE+ + AA+ L ++ GQ+ V +KA+ ++ +F +R I T
Sbjct: 31 IEKIVLNMGLGEAVQNPKIVEGAAEELTKIAGQRAVVTKAKKSIATFKLREGMPIGCRVT 90
Query: 243 VRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIY 401
+RG K + L + + +VR++ + F GN+ GIQE I I YD I
Sbjct: 91 LRGEKMYDFLSKLVNIALPRVRDFRGVSPKGFDGRGNYSMGIQEQIIFPEIDYDKIDKIK 150
Query: 402 GLDFYVV 422
G + +V
Sbjct: 151 GFNITIV 157
>UniRef50_Q6YR10 Cluster: 50S ribosomal protein L5; n=22;
Bacteria|Rep: 50S ribosomal protein L5 - Onion yellows
phytoplasma
Length = 181
Score = 50.8 bits (116), Expect = 2e-05
Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Frame = +3
Query: 54 VMRNLHIRKLCLNICVGESGDRLTRAAKVLEQL---TGQQPVFSKARYTVRSFGIRRNEK 224
VM+ + K+ +N+ VG++ + V+E+L +GQ PV +KA+ + +F +R
Sbjct: 27 VMQVPKVEKVVINMGVGDAIFNVKVLDDVVEELKLLSGQSPVITKAKKAISNFKLREGMP 86
Query: 225 IAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKYD 383
I T+RGA+ E L + +VR++ + +F GN+ G++E I I D
Sbjct: 87 IGAKVTLRGARKEAFLCKLTRLVFPRVRDFRGISGKSFDGRGNYALGLKEQIVFPEINID 146
Query: 384 PSIGIYGLDFYVV 422
I G+D +V
Sbjct: 147 KVKKIRGMDIIIV 159
>UniRef50_Q6B8W5 Cluster: Chloroplast 50S ribosomal protein L5; n=4;
Eukaryota|Rep: Chloroplast 50S ribosomal protein L5 -
Gracilaria tenuistipitata var. liui (Red alga)
Length = 179
Score = 50.4 bits (115), Expect = 3e-05
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 10/125 (8%)
Frame = +3
Query: 78 KLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVR 248
K+ +N +GE+ + L ++ + +TGQ+P +K++ + F IR N I + T+R
Sbjct: 34 KITINRGLGEAANNKQVLEKSMNEIAAITGQKPKITKSKKAIAGFKIRENIAIGLVVTLR 93
Query: 249 GAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 407
K + L + + ++R++ + F GN+ G++E I IKYD I GL
Sbjct: 94 RDKMYDFLNKLINLALPRIRDFRGISYKTFDGRGNYNLGLKEQIIFPEIKYDNVDKIRGL 153
Query: 408 DFYVV 422
D +V
Sbjct: 154 DITIV 158
>UniRef50_Q1ACG2 Cluster: Chloroplast 50S ribosomal protein L5; n=5;
Eukaryota|Rep: Chloroplast 50S ribosomal protein L5 -
Chara vulgaris (Common stonewort)
Length = 189
Score = 50.4 bits (115), Expect = 3e-05
Identities = 34/128 (26%), Positives = 64/128 (50%), Gaps = 10/128 (7%)
Frame = +3
Query: 69 HIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHC 239
+++K+ +N GE+ L K L + Q+P+ ++AR + F IR+ + V
Sbjct: 31 YLKKIVINCGFGEASQNSKFLEGTIKDLSIIASQKPIVTRARKAIAGFQIRKKMPVGVCV 90
Query: 240 TVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGI 398
T+RG L+R + ++++++ L +F GNF FGI+E + I YD I
Sbjct: 91 TLRGETMYAFLDRLIHLALPRIKDFQGLNWKSFDGYGNFHFGIREQLIFPEIHYDKIDKI 150
Query: 399 YGLDFYVV 422
G++ ++
Sbjct: 151 RGMNISII 158
>UniRef50_A5CCK0 Cluster: 50S ribosomal protein L5; n=1; Orientia
tsutsugamushi Boryong|Rep: 50S ribosomal protein L5 -
Orientia tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 189
Score = 50.0 bits (114), Expect = 4e-05
Identities = 28/104 (26%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Frame = +3
Query: 72 IRKLCLNICVGES---GDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 242
I+K+ + +CVG++ + K + +TGQ+P KA+ ++ +F +R+ IA T
Sbjct: 36 IKKIVVTMCVGDAVVDSKIIYYVKKCMAMITGQEPGLIKAKKSIAAFKLRKGMPIACKVT 95
Query: 243 VRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQE 356
+R +AE+ + R + ++++++ +F GNF FGI++
Sbjct: 96 LRKKRAEDFIRRLVFEVFPRIKDFKGFSIKSFDREGNFSFGIKD 139
>UniRef50_P73308 Cluster: 50S ribosomal protein L5; n=227; cellular
organisms|Rep: 50S ribosomal protein L5 - Synechocystis
sp. (strain PCC 6803)
Length = 180
Score = 50.0 bits (114), Expect = 4e-05
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Frame = +3
Query: 60 RNLH----IRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 218
+N+H + K+ +N +GE+ L + L +TGQ+PV ++AR + F IR
Sbjct: 24 KNIHQVPKLTKVTVNRGLGEASQNAKALESSLTELATITGQKPVVTRARKAIAGFKIREG 83
Query: 219 EKIAVHCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIK 377
+ V T+R + L+R + ++R++ + ++F GN+ GI+E + I
Sbjct: 84 MPVGVMVTLRSERMYAFLDRLINLALPRIRDFRGISPNSFDGRGNYSLGIREQLIFPEID 143
Query: 378 YDPSIGIYGLDFYVV 422
YD I G+D ++
Sbjct: 144 YDTIDQIRGMDVSII 158
>UniRef50_A5KRR2 Cluster: 50S ribosomal protein L5; n=1; candidate
division TM7 genomosp. GTL1|Rep: 50S ribosomal protein
L5 - candidate division TM7 genomosp. GTL1
Length = 194
Score = 48.4 bits (110), Expect = 1e-04
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Frame = +3
Query: 132 AKVLEQLTGQQPVFSKARYTVRSFGIRRN-EKIAVHCTVRGAKAEEILERGL-----KVR 293
+ L ++TGQQPV AR ++ SF IR +I V T+RGA+ E L+R + +VR
Sbjct: 64 SNTLRKITGQQPVDRMARKSIASFKIRSGMNRIGVSVTLRGARMYEFLDRLVNIALPRVR 123
Query: 294 EYE-LRRDNFSATGNFGFGI-QEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKT 467
++ + F +GN+ GI + I + ++ + ++GL V H R
Sbjct: 124 DFHGVGAKGFDHSGNYSLGITDQSIFAELAFEDTQVLHGLQVTFVFRTE--KPEHTRNLL 181
Query: 468 GKVGFP 485
K G P
Sbjct: 182 EKFGMP 187
>UniRef50_O04603 Cluster: 50S ribosomal protein L5, chloroplast
precursor; n=43; cellular organisms|Rep: 50S ribosomal
protein L5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 262
Score = 48.0 bits (109), Expect = 1e-04
Identities = 29/123 (23%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Frame = +3
Query: 72 IRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 242
++K+ +N +G++ L A K + +TGQ+P+ ++AR ++ +F IR ++ + + T
Sbjct: 86 VQKIVVNCGIGDAAQNDKGLEAAMKDIALITGQKPIKTRARASIATFKIREDQPLGIAVT 145
Query: 243 VRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEH-IDLGIKYDPSIGIY 401
+RG L+R + + R+++ + +F GN+ G+++ + I++D
Sbjct: 146 LRGDVMYSFLDRLINLALPRTRDFQGVSPSSFDGNGNYSIGVKDQGVFPEIRFDAVGKTR 205
Query: 402 GLD 410
G+D
Sbjct: 206 GMD 208
>UniRef50_Q9G893 Cluster: Ribosomal protein L5; n=1; Malawimonas
jakobiformis|Rep: Ribosomal protein L5 - Malawimonas
jakobiformis
Length = 174
Score = 47.2 bits (107), Expect = 3e-04
Identities = 35/132 (26%), Positives = 67/132 (50%), Gaps = 9/132 (6%)
Frame = +3
Query: 54 VMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAV 233
+M I+K+ +NI V +S +R+ VLE +TGQ+ KA+ ++ SF +R++ IA
Sbjct: 23 IMEIPSIKKISVNITV-DSKNRVIEPLMVLELITGQKAKVLKAKKSISSFNLRKDMYIAC 81
Query: 234 HCTVRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQE---HIDLGIKYDP 386
T++ + + + K+RE++ DN + N+ I+ ++ ++D
Sbjct: 82 KVTLQKKNMYNFINKLINIVLPKIREFKGFSVDNIDSQNNYTLSIKNMSIFPEIEYQFDI 141
Query: 387 SIGIYGLDFYVV 422
IYG+D +V
Sbjct: 142 FNKIYGMDITIV 153
>UniRef50_Q2GEC7 Cluster: 50S ribosomal protein L5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 50S ribosomal
protein L5 - Neorickettsia sennetsu (strain Miyayama)
Length = 177
Score = 46.0 bits (104), Expect = 6e-04
Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 10/125 (8%)
Frame = +3
Query: 78 KLCLNICVG-ESGDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVR 248
K+CL++ +G S D L A + L + GQ+ V + A+ ++ SF +R+ + T+R
Sbjct: 31 KVCLSVGLGGASSDSKLLASAVEDLSLIAGQKAVVTVAKKSISSFKLRKGFPVGCRVTLR 90
Query: 249 GAKAEEILERGLKV-----REYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 407
+ + + R L + ++++ NF GN FG+ EHI + +D + I G+
Sbjct: 91 KRRMFDFINRLLYMALPDQKDFKGFTMRNFDGHGNMAFGLTEHIVFPEVDFDKTYRIIGM 150
Query: 408 DFYVV 422
+ VV
Sbjct: 151 NVVVV 155
>UniRef50_Q42196 Cluster: 60S ribosomal protein L11; n=1;
Arabidopsis thaliana|Rep: 60S ribosomal protein L11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 64
Score = 44.8 bits (101), Expect = 0.001
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +3
Query: 453 RRRKTGKVGFPHRLTKEDAMKWFQQKYDGII 545
RRR + F HR+TK+DAMKWFQ KY+G+I
Sbjct: 18 RRRCRLVLVFQHRVTKDDAMKWFQVKYEGVI 48
>UniRef50_P56033 Cluster: 50S ribosomal protein L5; n=6;
Bacteria|Rep: 50S ribosomal protein L5 - Helicobacter
pylori (Campylobacter pylori)
Length = 181
Score = 44.8 bits (101), Expect = 0.001
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Frame = +3
Query: 132 AKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGL-----KVRE 296
A+ + + GQ+ V +KA+ +V F IR + T+R + LE+ + +V++
Sbjct: 54 AQTISLIAGQKAVITKAKKSVAGFKIREGMAVGAKVTLRNKRMYNFLEKLIVISLPRVKD 113
Query: 297 YE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVV 422
+ + R+ F GN+ FGI E + + YD + +G++ +V
Sbjct: 114 FRGISRNGFDGCGNYTFGINEQLIFPEVVYDDIMVSHGMNITMV 157
>UniRef50_O21252 Cluster: Mitochondrial 60S ribosomal protein L5;
n=3; cellular organisms|Rep: Mitochondrial 60S ribosomal
protein L5 - Reclinomonas americana
Length = 182
Score = 44.4 bits (100), Expect = 0.002
Identities = 32/129 (24%), Positives = 68/129 (52%), Gaps = 12/129 (9%)
Frame = +3
Query: 72 IRKLCLNICVGESGD---RLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 242
I K+ +N+ V E+ ++ +LE +TGQ+ + +KA+ ++ +F IR+ I V T
Sbjct: 31 IDKIIVNMGVKEAASDKKQILAPLLILELITGQKAIVTKAKKSISNFKIRKGFPIGVSVT 90
Query: 243 VRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHI---DLGIKYDPSIG 395
+RG E L + + K+R+++ + + + G+ GI++ + ++ +YD
Sbjct: 91 LRGNNMYEFLSKLITLVLPKIRDFKGVPFTSINKYGHLAIGIKDLLVFPEIESEYDKFNR 150
Query: 396 IYGLDFYVV 422
+YG + +V
Sbjct: 151 VYGANIVIV 159
>UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2;
Epsilonproteobacteria|Rep: 50S ribosomal protein L5 -
Thiomicrospira denitrificans (strain ATCC 33889 / DSM
1351)
Length = 181
Score = 44.4 bits (100), Expect = 0.002
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Frame = +3
Query: 150 LTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGL-----KVREYE-LRR 311
+ GQ+ A+ +V F +R + V T+RG K +R + +V+++ + R
Sbjct: 59 IAGQKASTVIAKKSVAGFKVREGMPVGVRVTLRGEKMYNFFDRLVSMALPRVKDFRGVPR 118
Query: 312 DNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVV 422
+ F GN+ FG+QE + + YD + I+G++ VV
Sbjct: 119 NGFDGRGNYNFGLQEQLIFPEVSYDSVMQIHGMNITVV 156
>UniRef50_Q6KI43 Cluster: 50S ribosomal protein L5; n=12;
Bacteria|Rep: 50S ribosomal protein L5 - Mycoplasma
mobile
Length = 182
Score = 43.6 bits (98), Expect = 0.003
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 10/127 (7%)
Frame = +3
Query: 72 IRKLCLNICVGESGDRLTRAAKVLEQLT---GQQPVFSKARYTVRSFGIRRNEKIAVHCT 242
I+K+ +N+ G +V+ +LT GQ P + A+ ++ SF IR + T
Sbjct: 31 IKKIVINMTAGNEVSNTKAVEEVINELTLITGQTPYKTHAKKSLASFKIREGMPMGGKVT 90
Query: 243 VRGAKAEEILERGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIY 401
+R K + L++ + ++R++ + +F GNF GI+E I I +D
Sbjct: 91 LRRDKMWDFLQKLIDIVIPRIRDFRGISPKSFDGRGNFALGIEEEIIFPEIDFDKIRRNK 150
Query: 402 GLDFYVV 422
GLD +V
Sbjct: 151 GLDVIIV 157
>UniRef50_A3GUR6 Cluster: 50S ribosomal protein L5; n=1; Vibrio
cholerae NCTC 8457|Rep: 50S ribosomal protein L5 -
Vibrio cholerae NCTC 8457
Length = 112
Score = 43.2 bits (97), Expect = 0.004
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +3
Query: 54 VMRNLHIRKLCLNICVGES-GDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEK 224
VM+ I K+ LN+ VGE+ D+ L AA + ++GQ+P+ +KAR +V F IR
Sbjct: 25 VMQVPRIEKITLNMGVGEAINDKKLLENAASDMAIISGQKPLITKARKSVAGFKIREGYP 84
Query: 225 IAVHCTVRGAK 257
I T+RG +
Sbjct: 85 IGCKVTLRGER 95
>UniRef50_P49547 Cluster: Chloroplast 50S ribosomal protein L5; n=4;
Bacillariophyta|Rep: Chloroplast 50S ribosomal protein
L5 - Odontella sinensis (Marine centric diatom)
Length = 238
Score = 43.2 bits (97), Expect = 0.004
Identities = 22/87 (25%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Frame = +3
Query: 120 LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGL----- 284
L ++ +TGQ+P+ ++A+ + F IR N ++ + T+RG+K L + +
Sbjct: 68 LKKSINEFTAITGQKPIITRAKKAIAGFKIRENMELGLTVTLRGSKMYSFLTKLIFFTFA 127
Query: 285 KVREYE-LRRDNFSATGNFGFGIQEHI 362
++R++ L +F GN+ G++E +
Sbjct: 128 QIRDFRGLSVRSFDKAGNYTLGLKEQL 154
>UniRef50_Q2EEW3 Cluster: Ribosomal protein L5; n=1; Helicosporidium
sp. ex Simulium jonesii|Rep: Ribosomal protein L5 -
Helicosporidium sp. subsp. Simulium jonesii (Green alga)
Length = 181
Score = 42.3 bits (95), Expect = 0.007
Identities = 29/119 (24%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Frame = +3
Query: 150 LTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGL-----KVREYE-LRR 311
+TGQ+P ++A+ + +F I++ + + T+RGAK L + + +R+++ +
Sbjct: 63 MTGQKPKLNRAKKHIAAFKIKKKMILGLSVTLRGAKMYAFLYKFINIILPNIRQFQGIEN 122
Query: 312 DNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFP 485
F + GN F I ++ + Y+P + G F V + NV+ + +GFP
Sbjct: 123 KQFDSLGNITFPIYSQSNIPELPYNPRVEKRG--FNVTINIKAKNVSEAKALCAYLGFP 179
>UniRef50_A7CZB2 Cluster: Ribosomal protein L5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L5 - Opitutaceae
bacterium TAV2
Length = 204
Score = 41.1 bits (92), Expect = 0.017
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Frame = +3
Query: 72 IRKLCLNICVGESGDRLTRAAKV---LEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 242
I K+ LN + D+ T+ A + L + GQ+PV +K+R V +F +R+ + + + T
Sbjct: 41 IVKINLNTGIDAEADK-TQIADIQRDLGNIAGQKPVLTKSRKAVSNFKLRQGQIVGAYVT 99
Query: 243 VRGAKAEEILERGLKV-----REYELRRDNFSATGNFGFGIQE 356
+RG E L R L V R++ GN+ GI +
Sbjct: 100 LRGNAMWEFLYRLLAVALPTIRDFRGVPAKLDGRGNYNLGISD 142
>UniRef50_A7P1Q7 Cluster: Chromosome chr19 scaffold_4, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_4, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 188
Score = 40.3 bits (90), Expect = 0.029
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +3
Query: 213 RNEKIAVHCTVRGAKAEEILERGLKVREYEL 305
R KIA + TV+G KA +LE GLKV+EYEL
Sbjct: 114 RYTKIACYVTVKGEKAMRLLESGLKVKEYEL 144
>UniRef50_Q8EUX5 Cluster: Putative uncharacterized protein MYPE7930;
n=3; Mycoplasma penetrans|Rep: Putative uncharacterized
protein MYPE7930 - Mycoplasma penetrans
Length = 1195
Score = 37.9 bits (84), Expect = 0.15
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = -3
Query: 482 ESNFAS-LTSSMSYIETWSTKNNVEIQTIDTNR-WIIFDTQIDVFLDTKAKVACGREVIT 309
ES+FA+ L +S+ + W+T ++V Q TN I+F ++T K A G ++
Sbjct: 881 ESDFANILENSLVFYNGWTTSSSVNYQITSTNNSQIVFSLSYKDNIETNLKKADGTNLVL 940
Query: 308 SQFIFSYFQSSLKDFLSLSTSNS 240
+ QSS + L+L++S S
Sbjct: 941 DSEWINGIQSSNNNVLNLASSYS 963
>UniRef50_Q9MAT2 Cluster: F13M7.17; n=1; Arabidopsis thaliana|Rep:
F13M7.17 - Arabidopsis thaliana (Mouse-ear cress)
Length = 665
Score = 36.7 bits (81), Expect = 0.36
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = +3
Query: 264 EILERGLKVREYELRR--DNFSATGNFGFGIQEH---IDLGIKYDPSIGIYGLDFYVVLG 428
E+LE+GLK EY + S +G G GI+ H +D GIK D +IG +D Y G
Sbjct: 283 EMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCG 342
>UniRef50_P33515 Cluster: Genome polyprotein [Contains: Capsid protein
C (Core protein); Envelope protein M (Matrix protein);
Major envelope protein E; Non- structural protein 1
(NS1); Non-structural protein 2A (NS2A); Flavivirin
protease NS2B regulatory subunit; Flavivirin protease NS3
catalytic subunit (EC 3.4.21.91); Non-structural protein
4A (NS4A); Non-structural protein 4B (NS4B); RNA-directed
RNA polymerase (EC 2.7.7.48) (NS5)]; n=34; root|Rep:
Genome polyprotein [Contains: Capsid protein C (Core
protein); Envelope protein M (Matrix protein); Major
envelope protein E; Non- structural protein 1 (NS1);
Non-structural protein 2A (NS2A); Flavivirin protease
NS2B regulatory subunit; Flavivirin protease NS3
catalytic subunit (EC 3.4.21.91); Non-structural protein
4A (NS4A); Non-structural protein 4B (NS4B); RNA-directed
RNA polymerase (EC 2.7.7.48) (NS5)] - Mosquito cell
fusing agent (CFA flavivirus)
Length = 3341
Score = 36.3 bits (80), Expect = 0.47
Identities = 28/83 (33%), Positives = 38/83 (45%)
Frame = -3
Query: 275 LKDFLSLSTSNSAMDSNLFITTNTKRPYSVSGL*EYRLLAGKLFQHLSGTS*PITRFSDT 96
L F STS L I T+T P + + +L A L G P+ +T
Sbjct: 1409 LLGFAVTSTSYFLGALYLLIATSTNLPVVIIRMLRMKLTASNRSDDLLGLGGPV----ET 1464
Query: 95 DVQAEFSDMKIPHNIFRIVFRSL 27
D+Q F D IP+ ++RIV RSL
Sbjct: 1465 DLQTSFQD--IPNGVYRIVVRSL 1485
>UniRef50_P46749 Cluster: Mitochondrial 60S ribosomal protein L5;
n=1; Prototheca wickerhamii|Rep: Mitochondrial 60S
ribosomal protein L5 - Prototheca wickerhamii
Length = 231
Score = 35.9 bits (79), Expect = 0.63
Identities = 17/69 (24%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +3
Query: 129 AAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELR 308
A LE +TGQ+P ++ A+ ++ +F +R+N+ + ++RG LE+ + + ++
Sbjct: 90 AFTALEMITGQKPKYTCAKKSISTFKLRQNQILGCKNSLRGNTMYRFLEKYISIVSTRIK 149
Query: 309 --RDNFSAT 329
+N+S++
Sbjct: 150 DWSENYSSS 158
>UniRef50_Q9LQE5 Cluster: F15O4.40; n=2; Arabidopsis thaliana|Rep:
F15O4.40 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1587
Score = 35.1 bits (77), Expect = 1.1
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = -3
Query: 440 ETWSTKNNVEIQTIDTNRWIIFDTQIDVFLDTKAKVACGREVITSQ---FIFSYFQSSLK 270
E+W T ++V + + +I D + VF+D +A+V+ G E+ + F+ S
Sbjct: 1271 ESWFTLSSVAFALVTKKKKMIMDDDVQVFIDEEAEVSSGAEMSADENEDVTGDSFEDSFI 1330
Query: 269 DFLSLSTSNSAMDS 228
D ++ T+N+ +S
Sbjct: 1331 DDGTMPTANTQAES 1344
>UniRef50_Q9G4D4 Cluster: Ribosomal protein L5; n=1;
Thraustochytrium aureum|Rep: Ribosomal protein L5 -
Thraustochytrium aureum
Length = 190
Score = 35.1 bits (77), Expect = 1.1
Identities = 13/47 (27%), Positives = 29/47 (61%)
Frame = +3
Query: 138 VLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILER 278
++E +TGQ+P S ++ +F IR+ + + ++ T+RG + +E+
Sbjct: 59 IIELITGQKPKISFSKKDNSNFNIRKGDLVGIYVTLRGPRIFSFIEK 105
>UniRef50_A1RXI7 Cluster: Methyltransferase type 11; n=1;
Thermofilum pendens Hrk 5|Rep: Methyltransferase type 11
- Thermofilum pendens (strain Hrk 5)
Length = 297
Score = 35.1 bits (77), Expect = 1.1
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = +3
Query: 141 LEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYE 302
+ +TG P+ S A VR G+ R EK+ CT G A LERG +V E
Sbjct: 121 MHNITGIDPL-SDAERKVRMLGVARGEKVLDVCTGLGYTAIRALERGAEVVSIE 173
>UniRef50_Q7XWI0 Cluster: OSJNBa0085C10.14 protein; n=25; Oryza
sativa|Rep: OSJNBa0085C10.14 protein - Oryza sativa
(Rice)
Length = 756
Score = 34.3 bits (75), Expect = 1.9
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Frame = -3
Query: 293 SYFQSSLKDFLS--LSTSNSAMD-SNLFITTNTKRPYSVSGL*EYRLLAG---KLFQHLS 132
++F + + FL +ST A+D SN+ TN K P +VS + + LAG + ++ S
Sbjct: 217 AFFMNLMNKFLGHVISTGGVAVDPSNVESVTNWKHPRTVSEIRSFLGLAGYNWRFIENFS 276
Query: 131 GTS*PITRFSDTDVQAEFSD 72
+ P+TR D++ ++S+
Sbjct: 277 KIAKPLTRLLQKDMKYKWSE 296
>UniRef50_Q5DZU7 Cluster: Putative uncharacterized protein; n=1;
Vibrio fischeri ES114|Rep: Putative uncharacterized
protein - Vibrio fischeri (strain ATCC 700601 / ES114)
Length = 120
Score = 33.9 bits (74), Expect = 2.5
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +3
Query: 174 SKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNF 338
+KA + ++ G+RRNE+ ++ + + E+G+ + E+E TG F
Sbjct: 21 AKAEFKIKGMGMRRNEEALIYRIPSHSTKAQYYEKGVTINEFEKAHQRLVNTGFF 75
>UniRef50_Q589Y5 Cluster: Serine protease; n=3; Obtectomera|Rep:
Serine protease - Bombyx mori (Silk moth)
Length = 392
Score = 33.9 bits (74), Expect = 2.5
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +3
Query: 213 RNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFG-IQEHIDLGI-KYDP 386
R+ A HCT R KAEE+ R + EY+++R N+S T NF I++H I Y
Sbjct: 193 RHVLTAAHCTRRW-KAEELFVR---LGEYDMKRTNYSRTYNFKVSEIRQHEAFQIANYKN 248
Query: 387 SIGIYGLD 410
I I L+
Sbjct: 249 DIAILKLE 256
>UniRef50_A2QJZ2 Cluster: Putative uncharacterized protein; n=1;
Aspergillus niger|Rep: Putative uncharacterized protein
- Aspergillus niger
Length = 166
Score = 33.9 bits (74), Expect = 2.5
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = -1
Query: 394 PIDGSYLIPKSMCSWIPKPKLPVAEKLSRLNSYSLTFNPLSRISSALAPRTVQWTAIFSL 215
P+ Y +P S+ P PK+PVA ++ ++ + N + AL PR + + ++
Sbjct: 26 PLSAHYRMPHEQPSFSPVPKIPVAWWVNLKERFAQSLNIHDQNDMAL-PRQLSSSNLYHN 84
Query: 214 RRIPKDLTVYLAF 176
+ PK LT+ +
Sbjct: 85 KSWPKSLTILTVY 97
>UniRef50_Q5LMB1 Cluster: Putative uncharacterized protein; n=1;
Silicibacter pomeroyi|Rep: Putative uncharacterized
protein - Silicibacter pomeroyi
Length = 177
Score = 33.5 bits (73), Expect = 3.3
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = -1
Query: 346 PKPKLPVAEKLSRLNSYSLTFNPLSRISSALAPRTVQWTAIFSLRRIPKDLTVYLAFENT 167
P+P+ + + L Y NPLSR S+ + R WT + + +P + AF
Sbjct: 11 PRPRARIGARCESL--YPARANPLSRRSNIMTRRRTGWTLVTAALLLPGMAMGFQAFNRF 68
Query: 166 GCWPVS 149
+PVS
Sbjct: 69 EVYPVS 74
>UniRef50_Q0DC29 Cluster: Os06g0493000 protein; n=8; Eukaryota|Rep:
Os06g0493000 protein - Oryza sativa subsp. japonica
(Rice)
Length = 1573
Score = 33.5 bits (73), Expect = 3.3
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = -3
Query: 440 ETWSTKNNVEIQTIDTNRWI----IFDTQIDVFLDTKAKVACGREVITSQFIFSYFQSSL 273
+ ++ K+N+E+ IDT R + D ID F + A V R +T Q+ YF S L
Sbjct: 331 QRFAAKSNIEV--IDTFRNLKQYGSVDVYIDKFEEVMALVKRNRPNLTEQYFLDYFISGL 388
Query: 272 KDFL 261
KD +
Sbjct: 389 KDHI 392
>UniRef50_A6D0I6 Cluster: Putative uncharacterized protein; n=1;
Vibrio shilonii AK1|Rep: Putative uncharacterized
protein - Vibrio shilonii AK1
Length = 353
Score = 33.1 bits (72), Expect = 4.4
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 300 ELRRDNFSATGNFGFGIQEHIDLGIKYDPSIG--IYGLDFYVVLGRPGFNVAHRRRKTGK 473
E ++D + T + F +++ D+ +YD IG ++G+ G PG +AH R +
Sbjct: 236 EFKKDFPNETLRYSFDAKDYRDIFSEYDLMIGYRVHGIGMCASQGTPGIMIAHDPRASTV 295
Query: 474 VGF 482
GF
Sbjct: 296 KGF 298
>UniRef50_UPI0000EBD5F1 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 247
Score = 32.7 bits (71), Expect = 5.8
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -1
Query: 331 PVAEK-LSRLNSYSLTFNPLSRISSALAPRTVQWTA 227
PV + + RL S+S F P S +SSAL PR W A
Sbjct: 62 PVTRRPVGRLGSFSGKFAPASSLSSALPPRRPSWLA 97
>UniRef50_A7HKR2 Cluster: Putative uncharacterized protein; n=1;
Fervidobacterium nodosum Rt17-B1|Rep: Putative
uncharacterized protein - Fervidobacterium nodosum
Rt17-B1
Length = 256
Score = 32.7 bits (71), Expect = 5.8
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = -3
Query: 446 YIETWSTKNNVEIQTIDTNRWIIFDTQIDVFLDTKAKVACGREVIT-SQFIFSYFQSSLK 270
YI ++ +V + I+ I+ D +I+ FL TK K+A GR+ ++ + I L
Sbjct: 114 YITSFVLAQSVSLNRIEQKTNILID-EIEKFLSTKGKIAKGRKSLSLAMKILKTRHEILS 172
Query: 269 DFLSLSTSNSAMDSNLF 219
D + L + A ++ L+
Sbjct: 173 DIMILDKPDLAWENELY 189
>UniRef50_A0RPV7 Cluster: Wbgx protein; n=3; Campylobacter|Rep: Wbgx
protein - Campylobacter fetus subsp. fetus (strain
82-40)
Length = 377
Score = 32.7 bits (71), Expect = 5.8
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 261 EEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYD 383
+E+ +R +R + + D+F GN G+ + + +D+G KYD
Sbjct: 199 DEMAKRARLIRNHAIVNDSFDKDGNLGY-VYDVVDIGQKYD 238
>UniRef50_Q2R3R6 Cluster: Transposon protein, putative, Pong
sub-class; n=2; Oryza sativa|Rep: Transposon protein,
putative, Pong sub-class - Oryza sativa subsp. japonica
(Rice)
Length = 596
Score = 32.7 bits (71), Expect = 5.8
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 219 EKIAVHCTVRGAKAEEILERGLK 287
EKIA + TVRG KA ++LE GLK
Sbjct: 280 EKIACYVTVRGEKAMQLLESGLK 302
>UniRef50_Q898I3 Cluster: Predicted transglutaminase/protease; n=1;
Clostridium tetani|Rep: Predicted
transglutaminase/protease - Clostridium tetani
Length = 296
Score = 32.3 bits (70), Expect = 7.7
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 6/113 (5%)
Frame = +3
Query: 219 EKIA---VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPS 389
EKIA V+ + G + E+ LK+ +Y ++R + G + +++HI GI D
Sbjct: 133 EKIAKDFVNKEIEGKNLSDA-EKALKINDYLVKRAAYHHEGVNTYYVEDHIAYGILSDRK 191
Query: 390 IGI---YGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 539
G+ Y F ++ + G + TG+ P++ K +A W K DG
Sbjct: 192 KGVCESYAKAFQLLAEKSGLTSIY---VTGQGKNPNK-DKGEAHAWNMVKIDG 240
>UniRef50_A7A6S7 Cluster: Putative uncharacterized protein; n=1;
Bifidobacterium adolescentis L2-32|Rep: Putative
uncharacterized protein - Bifidobacterium adolescentis
L2-32
Length = 257
Score = 32.3 bits (70), Expect = 7.7
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Frame = +3
Query: 87 LNICVGE-SGDRLTR--AAKVLEQLT-GQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGA 254
+N VGE +G+ + AA+ L+ LT QP S+A Y SFG R+ + C VR
Sbjct: 41 VNPTVGEMTGEYVATGSAAETLQSLTIDDQP--SRAGYDRDSFGFRQTDDDGNGCDVR-- 96
Query: 255 KAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIG 395
E++L R L Y + S +G+ G G + G+ DP G
Sbjct: 97 --EDVLARDLTDVRYIAGSGSSSDSGS-GSGAGCKVKSGVLSDPYTG 140
>UniRef50_Q0J370 Cluster: Os09g0251100 protein; n=5; Oryza
sativa|Rep: Os09g0251100 protein - Oryza sativa subsp.
japonica (Rice)
Length = 935
Score = 32.3 bits (70), Expect = 7.7
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = -1
Query: 349 IPKPKLPVAEKLSRLNSYSLTFNPLSRISSALAPRTVQWTAIFSLRR 209
+P P+ P +K + + ++L +P+ ++S+L PRT W A +S RR
Sbjct: 656 VPDPRFPTRDKCAGIPDFNLPPSPM--VASSLIPRT--WPASWSSRR 698
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 580,468,794
Number of Sequences: 1657284
Number of extensions: 12506667
Number of successful extensions: 33867
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 32888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33827
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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