Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_G10
         (553 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   2.9  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   5.0  
DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein O-fucosylt...    23   6.7  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 13/62 (20%), Positives = 30/62 (48%)
 Frame = +3

Query: 246  RGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVL 425
            R A   + LE    + +++L  +N  +  NF FG+     L ++++ +  +  ++ Y V 
Sbjct: 3256 RIAALSDELEESRHILQHKLYSNNSQSLNNFKFGLHTQEILPLQFNKASSMATINEYRVC 3315

Query: 426  GR 431
             +
Sbjct: 3316 SK 3317


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 426 GRPGFNVAHRRRKTGKVGFP 485
           G+PG+ +  ++   G  GFP
Sbjct: 498 GQPGYGIPGQKGNAGMAGFP 517


>DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein
           O-fucosyltransferase 2 protein.
          Length = 451

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -1

Query: 535 SYFC*NHFMASSFVKRWGNPTLPVLRLL*ATLKPGRPRTT 416
           +YF   +F A +F       +  +L  L    +PGRPR T
Sbjct: 190 AYFGYGNFTADAFTCLHFQGSAMLLHRLLERYRPGRPRAT 229


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,278
Number of Sequences: 2352
Number of extensions: 12535
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)