BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_G10
(553 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094790-1|AAM11143.1| 184|Drosophila melanogaster LD17235p pro... 336 1e-92
AE013599-2887|AAF57560.1| 184|Drosophila melanogaster CG7726-PA... 336 1e-92
U15643-1|AAC46585.1| 184|Drosophila melanogaster ribosomal prot... 332 2e-91
BT022593-1|AAY55009.1| 163|Drosophila melanogaster IP06777p pro... 246 2e-65
AE014297-3325|AAF56134.2| 1033|Drosophila melanogaster CG17379-P... 28 9.7
>AY094790-1|AAM11143.1| 184|Drosophila melanogaster LD17235p
protein.
Length = 184
Score = 336 bits (825), Expect = 1e-92
Identities = 156/165 (94%), Positives = 162/165 (98%)
Frame = +3
Query: 57 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 236
MR+LHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH
Sbjct: 17 MRDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 76
Query: 237 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 416
CTVRGAKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHIDLGIKYDPSIGIYGLDFY
Sbjct: 77 CTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 136
Query: 417 VVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILN 551
VVLGRPG+NV HR+RK+G VGF HRLTKEDAMKWFQQKYDGIILN
Sbjct: 137 VVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGIILN 181
>AE013599-2887|AAF57560.1| 184|Drosophila melanogaster CG7726-PA
protein.
Length = 184
Score = 336 bits (825), Expect = 1e-92
Identities = 156/165 (94%), Positives = 162/165 (98%)
Frame = +3
Query: 57 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 236
MR+LHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH
Sbjct: 17 MRDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 76
Query: 237 CTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 416
CTVRGAKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHIDLGIKYDPSIGIYGLDFY
Sbjct: 77 CTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 136
Query: 417 VVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILN 551
VVLGRPG+NV HR+RK+G VGF HRLTKEDAMKWFQQKYDGIILN
Sbjct: 137 VVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGIILN 181
>U15643-1|AAC46585.1| 184|Drosophila melanogaster ribosomal protein
DL11 protein.
Length = 184
Score = 332 bits (815), Expect = 2e-91
Identities = 154/163 (94%), Positives = 160/163 (98%)
Frame = +3
Query: 63 NLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 242
+LHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT
Sbjct: 19 DLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 78
Query: 243 VRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVV 422
VRGAKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVV
Sbjct: 79 VRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVV 138
Query: 423 LGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIILN 551
LGRPG+NV HR+RK+G VGF HRLTKEDAMKWFQQKYDGIILN
Sbjct: 139 LGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGIILN 181
>BT022593-1|AAY55009.1| 163|Drosophila melanogaster IP06777p
protein.
Length = 163
Score = 246 bits (601), Expect = 2e-65
Identities = 113/123 (91%), Positives = 118/123 (95%)
Frame = +3
Query: 183 RYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHI 362
R VRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRR+NFS+TGNFGFGIQEHI
Sbjct: 38 RRCVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHI 97
Query: 363 DLGIKYDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGI 542
DLGIKYDPSIGIYGLDFYVVLGRPG+NV HR+RK+G VGF HRLTKEDAMKWFQQKYDGI
Sbjct: 98 DLGIKYDPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGI 157
Query: 543 ILN 551
ILN
Sbjct: 158 ILN 160
>AE014297-3325|AAF56134.2| 1033|Drosophila melanogaster CG17379-PA
protein.
Length = 1033
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = -1
Query: 403 P*IPIDGSYLIPKSMCSWIPKPKLPVAEKLSRLNSYSLTFNPLSRISSALAPRTVQWTAI 224
P +P G Y P + SW +PV E++ YS+ F+P++ + +A + T
Sbjct: 134 PQVPYTG-YSYPIELMSWCLM--MPVPEEVPHSQLYSMVFSPMAFGITIVAMVLISLTLS 190
Query: 223 FSLR 212
+LR
Sbjct: 191 MALR 194
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,472,825
Number of Sequences: 53049
Number of extensions: 569027
Number of successful extensions: 1312
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1312
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2110522698
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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