Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_G08
(699 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 96 5e-21
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 59 5e-10
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 56 5e-09
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 51 1e-07
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 33 0.030
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 33 0.052
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 32 0.069
SPAC23C11.01 |||ER membrane protein, ICE2 family|Schizosaccharom... 29 0.48
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 29 0.48
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 28 1.1
SPBC14F5.12c |cbh2||centromere binding protein Cbh2|Schizosaccha... 28 1.5
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 25 7.9
SPAPYUG7.06 |mug67||PPPDE peptidase family |Schizosaccharomyces ... 25 7.9
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 95.9 bits (228), Expect = 5e-21
Identities = 44/144 (30%), Positives = 84/144 (58%)
Frame = +2
Query: 29 DQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDENDPENSGKINF 208
D+++A R+AF +FD + G I ++ ++ ++GQ +ELQ +I+E D + +G I+F
Sbjct: 8 DEQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDF 67
Query: 209 DGFCNIASHFLEEEDAEAMQQELKEAFRLYDREGNGYITTSTLKEIXXXXXXXXXXXXXX 388
F + + +++ D E +E++EAF+++D++GNGYIT L +
Sbjct: 68 TEFLTMMARKMKDTDNE---EEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVA 124
Query: 389 GIIAEIDTDGSGTVDFDEFMEMMT 460
+I E DTDG G ++++EF +++
Sbjct: 125 DMIREADTDGDGVINYEEFSRVIS 148
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 59.3 bits (137), Expect = 5e-10
Identities = 32/137 (23%), Positives = 63/137 (45%)
Frame = +2
Query: 47 LRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDENDPENSGKINFDGFCNI 226
+ +AF++FD+ K ID ++ + +G + SE+ ++ + D G + + F +
Sbjct: 39 INEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQMEDFVRV 98
Query: 227 ASHFLEEEDAEAMQQELKEAFRLYDREGNGYITTSTLKEIXXXXXXXXXXXXXXGIIAEI 406
+ + E D +E+K AF L+D + G I+ L+ + +I E
Sbjct: 99 MTEKIVERDP---LEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEF 155
Query: 407 DTDGSGTVDFDEFMEMM 457
D D G ++ EF+ +M
Sbjct: 156 DLDQDGEINEQEFIAIM 172
Score = 36.3 bits (80), Expect = 0.004
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = +2
Query: 239 LEEEDAEAMQQELKEAFRLYDREGNGYITTSTLKEIXXXXXXXXXXXXXXGIIAEIDTDG 418
L E E +Q++ EAF+L+D + + I L+ I+ + D G
Sbjct: 27 LRVEITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTG 86
Query: 419 SGTVDFDEFMEMMT 460
G + ++F+ +MT
Sbjct: 87 KGYLQMEDFVRVMT 100
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 56.0 bits (129), Expect = 5e-09
Identities = 34/135 (25%), Positives = 67/135 (49%)
Frame = +2
Query: 47 LRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDENDPENSGKINFDGFCNI 226
+++AF ++D K G I + ++L ++G D+EL L +E I+ F +
Sbjct: 11 MKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL----GDAIDEKKFMSF 66
Query: 227 ASHFLEEEDAEAMQQELKEAFRLYDREGNGYITTSTLKEIXXXXXXXXXXXXXXGIIAEI 406
S+ L E ++E +E +AFR++D++ +GYI T+ + ++ E
Sbjct: 67 VSNKLRETESE---EEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEA 123
Query: 407 DTDGSGTVDFDEFME 451
D SG+ D+ +F++
Sbjct: 124 DPTNSGSFDYYDFVQ 138
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 272 ELKEAFRLYDREGNGYITTS 331
E+KEAF LYD + +G I TS
Sbjct: 10 EMKEAFVLYDIDKDGLIPTS 29
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 51.2 bits (117), Expect = 1e-07
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 5/150 (3%)
Frame = +2
Query: 29 DQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDENDPENSGKINF 208
++++ +RK F D +SG ID + +I + S L +++DE + G ++F
Sbjct: 20 NEEIERIRKRFIKIDANQSGSIDRNEFLSIPSVASNPLA-SRLFSVVDE---DGGGDVDF 75
Query: 209 DGFCNIASHFLEEEDAEAMQQELKEAFRLYDREGNGYITTSTL-----KEIXXXXXXXXX 373
F N S F + E ++LK AF++YD + +GYI+ L +
Sbjct: 76 QEFINSLSVFSVHGNKE---EKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQL 132
Query: 374 XXXXXGIIAEIDTDGSGTVDFDEFMEMMTG 463
I E+D D G + F+EF ++++G
Sbjct: 133 QQIVDKTIMEVDKDRDGKISFEEFKDIVSG 162
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 33.5 bits (73), Expect = 0.030
Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Frame = +2
Query: 41 AMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDENDPENSGKINFDGFC 220
A F +FD K+GYID + L+ + + +L D +N+G I++D
Sbjct: 63 AFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEML 122
Query: 221 NIASHFLE--------EEDAEAMQQELKEAFRLYDREGNGYIT 325
I + ED + ++ + + F + D+ +G +T
Sbjct: 123 RIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLT 165
Score = 25.4 bits (53), Expect = 7.9
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Frame = +2
Query: 26 DDQKMAMLRKAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSEL-QALIDENDPENSGKI 202
D +++ K F F SG+++ + I D S + + + D + +G I
Sbjct: 23 DKKELQQWYKGF--FKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYI 80
Query: 203 NFDGFCNIASHFLEEEDAEAMQQELKEAFRLYDREGNGYITTSTLKEI 346
+F F S E + +L AF+LYD + NG I+ + I
Sbjct: 81 DFKEFICALSVTSRGE----LNDKLIWAFQLYDLDNNGLISYDEMLRI 124
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 32.7 bits (71), Expect = 0.052
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +2
Query: 53 KAFQMFDTTKSGYIDVLKISTILNTMGQLFDDSELQALIDENDPENSGKINFDGFCNIAS 232
+AF +FD T GYID + +G+ +LQ ++D +GK++ + F +
Sbjct: 16 EAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLMLDL--AGTNGKVSREEFAELWI 73
Query: 233 H 235
H
Sbjct: 74 H 74
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 32.3 bits (70), Expect = 0.069
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 245 EEDAEAMQQELKEAFRLYDREGNGYITTSTLKE 343
++D M Q LKE Y+ E N IT+ TLKE
Sbjct: 522 KDDLTEMNQRLKEQIESYENEVNSEITSRTLKE 554
>SPAC23C11.01 |||ER membrane protein, ICE2
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 29.5 bits (63), Expect = 0.48
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +2
Query: 101 LKISTILNTMGQLFDDSELQALIDENDPENSGKINFDGFCNIASHF 238
+ +ST+ +T + DDS L+ +ID+ PE GK NI++HF
Sbjct: 12 ISVSTVEDTSFEAMDDSILE-IIDDEAPEIQGKPK----ANISTHF 52
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 29.5 bits (63), Expect = 0.48
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 269 QELKEAFRLYDREGNGYITTSTLK 340
QELKEAF L D++G+G I +K
Sbjct: 48 QELKEAFALLDKDGDGNIGREDVK 71
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +2
Query: 278 KEAFRLYDREGNGYITTSTLKEIXXXXXXXXXXXXXXGIIAEIDTDGSGTVDFDEFMEMM 457
K+AF L+DR G G I +++ ++ I EI++ VD ++F++++
Sbjct: 9 KQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAE----ITEIESTLPAEVDMEQFLQVL 64
>SPBC14F5.12c |cbh2||centromere binding protein
Cbh2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 27.9 bits (59), Expect = 1.5
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +2
Query: 95 DVLKISTILNTM-GQLFDDSELQALIDENDP--ENSGKINFDGFCNIASHFLEEEDAEAM 265
+ ++I+ L + G+ D ++ + + +P ENS N D +A+ FL+E + E
Sbjct: 402 ETIRIAVNLQELIGKYLGDKDIFQIENFINPIEENSADTNDDIVNQVAAQFLDEREFETD 461
Query: 266 QQELKEAFRLYDREGNGYITT 328
++E + + L ++ I T
Sbjct: 462 EEEEESQYLLSTKDAINAINT 482
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 25.4 bits (53), Expect = 7.9
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 123 TPWDNCSMIPNCRRSSMKMIQRTLEKLTSMVSAISLPISLK-KKTQKLC 266
TP S+ PN RRSS+++ + T +++I P L ++ Q+ C
Sbjct: 61 TPTMRPSLAPNTRRSSVRVSNASFISQTPNITSIKDPRPLSDRRYQQEC 109
>SPAPYUG7.06 |mug67||PPPDE peptidase family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 201
Score = 25.4 bits (53), Expect = 7.9
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 3/94 (3%)
Frame = +3
Query: 21 PMTIKRWRCSAKHSRCSTQRSPDIS-MF*RFQQS*TPWDNCSMIPNCRR-SSMKMIQRTL 194
P+ RWRCS C T PD+ + R Q T + NC ++ I+ T
Sbjct: 60 PLEGCRWRCSIALPNC-TLPKPDVDRILIRLSQEFTGLSYSLLERNCNHFTNAAAIELTG 118
Query: 195 EKLTSMVSAIS-LPISLKKKTQKLCNKN*KKLSD 293
+ S ++ IS + ++ T L K SD
Sbjct: 119 SPIPSFLNRISRIGLAFPTITNALLQHGQKNTSD 152
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,619,614
Number of Sequences: 5004
Number of extensions: 49839
Number of successful extensions: 156
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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