SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_G07
         (623 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK095895-1|BAC04644.1|  238|Homo sapiens protein ( Homo sapiens ...    37   0.067
AY358128-1|AAQ88495.1|  717|Homo sapiens IGSF9 protein.                33   0.82 
AL513485-5|CAI14606.1| 1163|Homo sapiens immunoglobulin superfam...    33   0.82 
AL513485-4|CAI14605.1| 1179|Homo sapiens immunoglobulin superfam...    33   0.82 
AB037776-1|BAA92593.1| 1189|Homo sapiens KIAA1355 protein protein.     33   0.82 
BC030141-1|AAH30141.1| 1163|Homo sapiens immunoglobulin superfam...    30   7.6  

>AK095895-1|BAC04644.1|  238|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38576 fis, clone HCHON2007482. ).
          Length = 238

 Score = 36.7 bits (81), Expect = 0.067
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +2

Query: 404 KEGFISWRQQPGATEAHPVRAAEHFMPLIVIAGAGGTMPGERIFNW 541
           + G + WR + GA+ + P  AA   +P  + A  GG  PG R   W
Sbjct: 35  RAGSLLWRGKEGASGSEPSSAARRSLPAQLAAPGGGARPGSRGVTW 80


>AY358128-1|AAQ88495.1|  717|Homo sapiens IGSF9 protein.
          Length = 717

 Score = 33.1 bits (72), Expect = 0.82
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = +2

Query: 11  ESYTYEYKAPGDPELAERIHESLKSAGIKSKLDPKRG 121
           E+Y ++ + PGD EL E +H  L S+ ++ + +P+ G
Sbjct: 622 ENYEWDSEFPGDMELLETLHLGLASSRLRPEAEPELG 658


>AL513485-5|CAI14606.1| 1163|Homo sapiens immunoglobulin superfamily,
            member 9 protein.
          Length = 1163

 Score = 33.1 bits (72), Expect = 0.82
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = +2

Query: 11   ESYTYEYKAPGDPELAERIHESLKSAGIKSKLDPKRG 121
            E+Y ++ + PGD EL E +H  L S+ ++ + +P+ G
Sbjct: 1068 ENYEWDSEFPGDMELLETLHLGLASSRLRPEAEPELG 1104


>AL513485-4|CAI14605.1| 1179|Homo sapiens immunoglobulin superfamily,
            member 9 protein.
          Length = 1179

 Score = 33.1 bits (72), Expect = 0.82
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = +2

Query: 11   ESYTYEYKAPGDPELAERIHESLKSAGIKSKLDPKRG 121
            E+Y ++ + PGD EL E +H  L S+ ++ + +P+ G
Sbjct: 1084 ENYEWDSEFPGDMELLETLHLGLASSRLRPEAEPELG 1120


>AB037776-1|BAA92593.1| 1189|Homo sapiens KIAA1355 protein protein.
          Length = 1189

 Score = 33.1 bits (72), Expect = 0.82
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = +2

Query: 11   ESYTYEYKAPGDPELAERIHESLKSAGIKSKLDPKRG 121
            E+Y ++ + PGD EL E +H  L S+ ++ + +P+ G
Sbjct: 1094 ENYEWDSEFPGDMELLETLHLGLASSRLRPEAEPELG 1130


>BC030141-1|AAH30141.1| 1163|Homo sapiens immunoglobulin superfamily,
            member 9 protein.
          Length = 1163

 Score = 29.9 bits (64), Expect = 7.6
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = +2

Query: 11   ESYTYEYKAPGDPELAERIHESLKSAGIKSKLDPKRG 121
            E+Y ++ + PGD EL E +H  L S+ ++ + + + G
Sbjct: 1068 ENYEWDSEFPGDMELLETLHLGLASSRLRPEAETELG 1104


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,136,551
Number of Sequences: 237096
Number of extensions: 2041018
Number of successful extensions: 4441
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4441
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -