Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_G07
         (623 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81557-14|CAN99712.1|  321|Caenorhabditis elegans Hypothetical p...    34   0.095
Z81557-13|CAB04530.2|  303|Caenorhabditis elegans Hypothetical p...    34   0.095
Z93379-9|CAE11301.1|  354|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z75534-1|CAH04713.2|  326|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z93379-8|CAC35812.2|  354|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U46673-3|AAC48151.1|  506|Caenorhabditis elegans Aldehyde dehydr...    28   4.7  
AF036705-8|AAB95169.1|  685|Caenorhabditis elegans Hypothetical ...    28   4.7  

>Z81557-14|CAN99712.1|  321|Caenorhabditis elegans Hypothetical
           protein F59A1.11b protein.
          Length = 321

 Score = 33.9 bits (74), Expect = 0.095
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 128 HGVFVPMMLINPSADIPIVQVSVLSNQDAEQHYKLGQV 241
           + + +P+MLI P +D  I    +LS QD    +K GQV
Sbjct: 150 YSIAIPLMLIGPISDAVIAYPVILSGQDMNVFFKHGQV 187


>Z81557-13|CAB04530.2|  303|Caenorhabditis elegans Hypothetical
           protein F59A1.11a protein.
          Length = 303

 Score = 33.9 bits (74), Expect = 0.095
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 128 HGVFVPMMLINPSADIPIVQVSVLSNQDAEQHYKLGQV 241
           + + +P+MLI P +D  I    +LS QD    +K GQV
Sbjct: 150 YSIAIPLMLIGPISDAVIAYPVILSGQDMNVFFKHGQV 187


>Z93379-9|CAE11301.1|  354|Caenorhabditis elegans Hypothetical
           protein F21H7.14 protein.
          Length = 354

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -2

Query: 406 FPILLVLSSTNFIEIIIKLFIYNLTLVSAIHKLPHI 299
           FPI +++S+TN + ++I ++I    L +  H L HI
Sbjct: 197 FPIYILISNTNNLHLVIYVYIPFFALNTLAHFLFHI 232


>Z75534-1|CAH04713.2|  326|Caenorhabditis elegans Hypothetical
           protein F08A10.2 protein.
          Length = 326

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -2

Query: 409 FFPILLVLSSTNFIEIIIKLFIYNLTLVSAIHKL 308
           FFP    ++STNF ++I  L+I+   LV  IHKL
Sbjct: 128 FFPSWKSVASTNFKKLIKILYIF-FILVQIIHKL 160


>Z93379-8|CAC35812.2|  354|Caenorhabditis elegans Hypothetical
           protein F21H7.11 protein.
          Length = 354

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = -2

Query: 406 FPILLVLSSTNFIEIIIKLFIYNLTLVSAIHKLPHI 299
           FP+L+VLS     + +  +FI ++ L +A++ L H+
Sbjct: 194 FPVLIVLSDQKTAQFVTYIFIPSMFLQTALNILFHV 229


>U46673-3|AAC48151.1|  506|Caenorhabditis elegans Aldehyde
           dehydrogenase protein 10 protein.
          Length = 506

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 156 ISIIGTKTPWSQPLFGSSFDLIPAL 82
           + + G  +PW+ PL+  SF L PAL
Sbjct: 165 VGVAGLISPWNLPLYLLSFKLAPAL 189


>AF036705-8|AAB95169.1|  685|Caenorhabditis elegans Hypothetical
           protein F37C4.3 protein.
          Length = 685

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -2

Query: 418 YKTFFPILLVLSSTNFIEIIIKLFIYNLTLV 326
           Y+TF    L LSSTN   +++ LFI N+ ++
Sbjct: 359 YETFEKCYLKLSSTNVGLLVVLLFILNVVVI 389


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,554,617
Number of Sequences: 27780
Number of extensions: 311951
Number of successful extensions: 893
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)