Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_G07
         (623 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   2.4  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   4.2  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   5.6  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   5.6  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 246 ESSEKKVSLY*DRVCHTII 302
           + SEK++ LY  RV HT +
Sbjct: 74  DKSEKRIPLYVCRVLHTTV 92


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 523 ARHCSSSTSDNNQRH 479
           ARH S S + NN +H
Sbjct: 432 ARHSSKSDNQNNNQH 446


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 197 LSNQDAEQHYKLGQVLRE 250
           L+N    + Y+LGQ LRE
Sbjct: 41  LTNSGKMREYQLGQFLRE 58


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 197 LSNQDAEQHYKLGQVLRE 250
           L+N    + Y+LGQ LRE
Sbjct: 56  LTNSGKMREYQLGQFLRE 73


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,387
Number of Sequences: 438
Number of extensions: 3916
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)