Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_G03
(471 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 216 1e-57
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 215 3e-57
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 169 1e-43
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 140 1e-34
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 91 1e-19
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 86 2e-18
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 82 4e-17
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 80 1e-16
SPAC926.08c |||Brix doamin protein Rpf2 |Schizosaccharomyces pom... 27 1.9
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 26 3.3
SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|ch... 26 3.3
SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces... 25 5.8
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 216 bits (528), Expect = 1e-57
Identities = 108/153 (70%), Positives = 119/153 (77%)
Frame = +3
Query: 12 NKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTME 191
N RA+RRLRTACERAKRTLSSS QASIEIDSLFEGIDFYTSITRARFEEL ADLFR TME
Sbjct: 254 NARAVRRLRTACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRKTME 313
Query: 192 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXX 371
PVE+ LRD+K+DKA +++IVLVGGSTRIP+VQKL+ DFFNGKE KSINPDE
Sbjct: 314 PVERVLRDSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAAV 373
Query: 372 XXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
+L GD SE+ QD GIETAGG
Sbjct: 374 QAAVLTGDTSEKTQDLLLLDVAPLSMGIETAGG 406
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 215 bits (525), Expect = 3e-57
Identities = 107/153 (69%), Positives = 120/153 (78%)
Frame = +3
Query: 12 NKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTME 191
N RA+RRLRTACERAKRTLSSS QASIEIDSL+EGIDFYTSITRARFEEL ADLFR+TME
Sbjct: 254 NARAVRRLRTACERAKRTLSSSAQASIEIDSLYEGIDFYTSITRARFEELCADLFRNTME 313
Query: 192 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXX 371
PVEK LRD+K+DK+ +++IVLVGGSTRIP++QKL+ DFFNGKE KSINPDE
Sbjct: 314 PVEKVLRDSKIDKSSVNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVAYGAAV 373
Query: 372 XXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
IL GD SE+ QD GIETAGG
Sbjct: 374 QAAILVGDTSEKTQDLLLLDVAPLSLGIETAGG 406
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 169 bits (412), Expect = 1e-43
Identities = 83/151 (54%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Frame = +3
Query: 18 RALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV 197
RALRRLR+ACERAKR LSS TQ ++E+DSL GIDF +SITRARFE++NA F++T++PV
Sbjct: 260 RALRRLRSACERAKRALSSVTQTTVEVDSLSNGIDFSSSITRARFEDINATTFKATIDPV 319
Query: 198 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXX 377
K L+D+K+ KA +HDIVLVGGSTRIPKVQ+L+ DFF+G+ LNKSINPDE
Sbjct: 320 AKVLKDSKVPKADVHDIVLVGGSTRIPKVQRLVSDFFDGRALNKSINPDEAVAYGAAVQA 379
Query: 378 XIL-HGDKSEEVQDXXXXXXXXXXXGIETAG 467
+L + S++ QD G+ G
Sbjct: 380 AVLTNKADSDKTQDLLLLDVVPLSLGVAMEG 410
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 140 bits (338), Expect = 1e-34
Identities = 70/151 (46%), Positives = 99/151 (65%)
Frame = +3
Query: 18 RALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV 197
+A+ +L+ E+AKRTLSS IEI+S F G DF +++RA+FEE+N DLF+ T++PV
Sbjct: 288 KAMGKLKREVEKAKRTLSSQKSVRIEIESFFNGQDFSETLSRAKFEEINMDLFKKTLKPV 347
Query: 198 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXX 377
E+ L+D+ + K++I DIVLVGGSTRIPKVQ+LL+ FF GK+ +K INPDE
Sbjct: 348 EQVLKDSNLKKSEIDDIVLVGGSTRIPKVQELLESFF-GKKASKGINPDEAVAYGAAVQA 406
Query: 378 XILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
+L G++ + + GIET GG
Sbjct: 407 GVLSGEEGSD--NIVLLDVIPLTLGIETTGG 435
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 90.6 bits (215), Expect = 1e-19
Identities = 43/112 (38%), Positives = 71/112 (63%)
Frame = +3
Query: 12 NKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTME 191
N RAL RL R K LS++++A I+ L +GIDF ITR+ E L D+ + +E
Sbjct: 290 NHRALARLEKEALRVKHILSANSEAIASIEELADGIDFRLKITRSVLESLCKDMEDAAVE 349
Query: 192 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 347
P+ K+L+ A + ++I+ I+L GG++RIP +Q L D+ + +++K++N DE
Sbjct: 350 PINKALKKANLTFSEINSIILFGGASRIPFIQSTLADYVSSDKISKNVNADE 401
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 86.2 bits (204), Expect = 2e-18
Identities = 51/157 (32%), Positives = 86/157 (54%), Gaps = 4/157 (2%)
Frame = +3
Query: 12 NKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLFR 179
++ A++R+R A E+AK LSS ++ I + + I+RA+FE+L L R
Sbjct: 298 DRLAVQRIREAAEKAKCELSSLSKTDISLPFITADATGPKHINMEISRAQFEKLVDPLVR 357
Query: 180 STMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXX 359
T++P +++L+DA + ++I++++LVGG TR+P+V + ++ F +E KS+NPDE
Sbjct: 358 RTIDPCKRALKDANLQTSEINEVILVGGMTRMPRVVETVKSIFK-REPAKSVNPDEAVAI 416
Query: 360 XXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
+L G V+D GIET GG
Sbjct: 417 GAAIQGGVLSG----HVKDLVLLDVTPLSLGIETLGG 449
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 82.2 bits (194), Expect = 4e-17
Identities = 43/113 (38%), Positives = 69/113 (61%)
Frame = +3
Query: 9 SNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 188
SN +A RL TA ER K+ LS++ A + ++ + ID + I R+ FEEL L
Sbjct: 261 SNPKATFRLATAVERLKKVLSANANAPLNVEMIMNDIDASSFIKRSDFEELIKPLLERLT 320
Query: 189 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 347
P+EK+L A + K ++ I +VGG TR+P V++++ ++F GK L+ ++N DE
Sbjct: 321 PPIEKALELAGIKKEDLYSIEMVGGCTRVPIVKEVIANYF-GKGLSFTLNQDE 372
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 80.2 bits (189), Expect = 1e-16
Identities = 38/109 (34%), Positives = 64/109 (58%)
Frame = +3
Query: 6 RSNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRST 185
R N R+L +LR CE KR LS+ T AS +DSL +GIDF++SI R R++ +
Sbjct: 278 RKNARSLAKLRAQCEITKRVLSNGTTASAAVDSLADGIDFHSSINRLRYDLAASATLNRM 337
Query: 186 MEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKS 332
+ V +++ A M+ I +++L GG++ PK+ L++ F + + +S
Sbjct: 338 ADLVTEAVEKANMEPFDISEVILAGGASNTPKLTSLMESIFPEQTIIRS 386
>SPAC926.08c |||Brix doamin protein Rpf2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 26.6 bits (56), Expect = 1.9
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -2
Query: 161 QLLKTSTSDRRVEVDTLEE*IDFNAR 84
+LLKT T+ RVE++ + IDFN R
Sbjct: 207 KLLKTKTNLPRVELEEMGPRIDFNIR 232
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 25.8 bits (54), Expect = 3.3
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 257 HEYDVVNLGLVHLRIAEGLFDGLHCRSEQISVQLLKTSTSD 135
HEY+V+ L E LF G++ R E + ++L + D
Sbjct: 931 HEYNVIKGLLEEYYNVEKLFSGINKREEDVILRLRDENKDD 971
>SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 538
Score = 25.8 bits (54), Expect = 3.3
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +3
Query: 102 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 260
SL G+D+YT I E +A +S+ E +K D + D++ D + VG
Sbjct: 331 SLARGLDYYTGIIYEAVTEASAPKIKSSAE--KKKSADPEADRSN-DDSIGVG 380
>SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 25.0 bits (52), Expect = 5.8
Identities = 9/29 (31%), Positives = 12/29 (41%)
Frame = +1
Query: 178 DLQWSPSKSPSAMRRWTRPRFTTSYSWAG 264
D+ W P KS + P F + W G
Sbjct: 141 DIHWKPGKSLFRKNKKLPPNFFDYFQWTG 169
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,704,044
Number of Sequences: 5004
Number of extensions: 29493
Number of successful extensions: 103
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 100
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 180421690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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