Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_G03
(471 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0109 - 22454539-22456268,22457069-22457279 221 2e-58
03_02_0546 - 9381989-9383733,9385838-9386054 221 2e-58
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229 220 5e-58
03_02_0540 + 9340379-9340592,9341250-9342988 219 7e-58
03_06_0484 + 34233042-34233258,34235317-34237049 218 2e-57
11_08_0075 + 28173220-28173433,28175348-28177083 217 3e-57
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84... 170 4e-43
11_01_0564 - 4447078-4448519,4449465-4449711 169 7e-43
03_02_0542 - 9348126-9349585,9352433-9352655 169 7e-43
11_01_0563 + 4423609-4423846,4424671-4426132,4428949-4429364,443... 161 2e-40
11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836 161 3e-40
05_04_0392 - 20889699-20891726 161 3e-40
08_01_0654 - 5639419-5641449 161 3e-40
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442... 160 5e-40
05_04_0052 - 17515344-17517353 159 1e-39
01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819 144 2e-35
12_02_0825 + 23476943-23476952,23477263-23477328,23477737-234778... 128 3e-30
05_03_0397 + 13488642-13488941,13489711-13489963,13490594-134906... 105 2e-23
01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165 103 5e-23
02_05_0916 - 32706039-32706332,32707483-32708103,32708450-327090... 93 8e-20
02_05_0491 + 29470575-29471351,29471574-29471806,29472697-294728... 92 2e-19
03_01_0093 - 745434-746057,746492-747112,747222-747791,747870-74... 92 2e-19
06_01_0770 - 5756200-5756741,5756790-5757286,5757356-5757782,575... 85 3e-17
01_01_0573 + 4253484-4254653,4255526-4255735,4255842-4255937,425... 83 1e-16
06_03_1137 + 27903012-27904196,27904330-27904542,27905775-279058... 81 3e-16
12_01_0346 + 2652181-2653566 81 4e-16
05_01_0550 + 4820086-4821255,4822112-4822321,4822429-4822524,482... 79 1e-15
05_07_0320 + 29235266-29235305,29235409-29236682 78 3e-15
03_02_0180 - 6211823-6213559 57 6e-09
06_03_0830 + 25159758-25162460 31 0.35
12_01_0727 + 6446283-6449300 30 0.82
12_01_0715 - 6230393-6231559,6233234-6234553 30 0.82
06_01_0847 - 6451525-6451678,6452870-6453066,6454300-6454591,645... 30 1.1
01_03_0103 - 12567986-12568141,12568307-12568442,12568751-125688... 29 1.9
12_01_0731 - 6516894-6517473,6517485-6519574 28 3.3
01_06_1527 - 38006174-38006815,38006920-38007420 28 4.4
01_06_0668 + 31058497-31059510,31059609-31059676,31060189-310602... 28 4.4
12_01_0740 + 6646471-6649407 27 5.8
12_01_0722 + 6355972-6359031 27 5.8
01_01_0472 - 3473096-3474288,3474833-3474938 27 5.8
10_07_0138 + 13325418-13325954 27 7.6
10_06_0081 - 10449655-10450140,10450249-10450430,10450703-10450709 27 7.6
04_03_0815 - 19949584-19950111,19950210-19950632 27 7.6
>05_05_0109 - 22454539-22456268,22457069-22457279
Length = 646
Score = 221 bits (541), Expect = 2e-58
Identities = 108/153 (70%), Positives = 120/153 (78%)
Frame = +3
Query: 12 NKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTME 191
N RALRRLRTACERAKRTLSS+ Q +IEIDSL+EGIDFYT+ITRARFEELN DLFR ME
Sbjct: 261 NPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCME 320
Query: 192 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXX 371
PVEK LRDAKMDK+ +HD+VLVGGSTRIPKVQ+LLQDFFNGKEL KSINPDE
Sbjct: 321 PVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAV 380
Query: 372 XXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
IL G+ +E+VQD G+ETAGG
Sbjct: 381 QAAILSGEGNEKVQDLLLLDVTPLSLGLETAGG 413
>03_02_0546 - 9381989-9383733,9385838-9386054
Length = 653
Score = 221 bits (540), Expect = 2e-58
Identities = 109/153 (71%), Positives = 119/153 (77%)
Frame = +3
Query: 12 NKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTME 191
N RALRRLRTACERAKRTLSS+ Q +IEIDSL+EGIDFY +ITRARFEELN DLFR ME
Sbjct: 263 NPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYATITRARFEELNMDLFRRCME 322
Query: 192 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXX 371
PVEK LRDAKMDKAQIHD+VLVGGSTRIPKVQ+LLQDFFNGKEL KSINPDE
Sbjct: 323 PVEKCLRDAKMDKAQIHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAV 382
Query: 372 XXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
IL G+ ++ VQD G+ETAGG
Sbjct: 383 QAAILSGEGNQRVQDLLLLDVTPLSLGLETAGG 415
>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
Length = 841
Score = 220 bits (537), Expect = 5e-58
Identities = 107/153 (69%), Positives = 120/153 (78%)
Frame = +3
Query: 12 NKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTME 191
N RALRRLRTACERAKRTLSS+ Q +IEIDSL+EGIDFY++ITRARFEELN DLFR ME
Sbjct: 454 NPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCME 513
Query: 192 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXX 371
PVEK LRDAKMDK+ +HD+VLVGGSTRIPKVQ+LLQDFFNGKEL KSINPDE
Sbjct: 514 PVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAV 573
Query: 372 XXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
IL G+ +E+VQD G+ETAGG
Sbjct: 574 QAAILSGEGNEKVQDLLLLDVTPLSLGLETAGG 606
>03_02_0540 + 9340379-9340592,9341250-9342988
Length = 650
Score = 219 bits (536), Expect = 7e-58
Identities = 107/153 (69%), Positives = 120/153 (78%)
Frame = +3
Query: 12 NKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTME 191
N RALRRLRTACERAKRTLSS+ Q +IEIDSL+EGIDFYT+ITRARFEELN DLFR ME
Sbjct: 262 NPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCME 321
Query: 192 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXX 371
PVEK LRDAKMDK+ +HD+VLVGGSTRIP+VQ+LLQDFFNGKEL KSINPDE
Sbjct: 322 PVEKCLRDAKMDKSTVHDVVLVGGSTRIPRVQQLLQDFFNGKELCKSINPDEAVAYGAAV 381
Query: 372 XXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
IL G+ +E+VQD G+ETAGG
Sbjct: 382 QAAILTGEGNEKVQDLLLLDVTPLSQGLETAGG 414
>03_06_0484 + 34233042-34233258,34235317-34237049
Length = 649
Score = 218 bits (532), Expect = 2e-57
Identities = 105/153 (68%), Positives = 120/153 (78%)
Frame = +3
Query: 12 NKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTME 191
N RALRRLRT+CERAKRTLSS+ Q +IEIDSLFEG+DFY++ITRARFEELN DLFR ME
Sbjct: 263 NPRALRRLRTSCERAKRTLSSTAQTTIEIDSLFEGVDFYSTITRARFEELNMDLFRKCME 322
Query: 192 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXX 371
PVEK LRDAKMDK+ +HD+VLVGGSTRIP+VQ+LLQDFFNGKEL KSINPDE
Sbjct: 323 PVEKCLRDAKMDKSTVHDVVLVGGSTRIPRVQQLLQDFFNGKELCKSINPDEAVAYGAAV 382
Query: 372 XXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
IL G+ +E+VQD G+ETAGG
Sbjct: 383 QAAILSGEGNEKVQDLLLLDVTPLSLGLETAGG 415
>11_08_0075 + 28173220-28173433,28175348-28177083
Length = 649
Score = 217 bits (531), Expect = 3e-57
Identities = 105/153 (68%), Positives = 120/153 (78%)
Frame = +3
Query: 12 NKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTME 191
N RALRRLRTACERAKRTLSS+ Q +IEIDSL+EGIDFY++ITRARFEELN DLFR ME
Sbjct: 262 NPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCME 321
Query: 192 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXX 371
PVEK LRDAKMDK+ +HD+VLVGGSTRIP+VQ+LLQDFFNGKEL K+INPDE
Sbjct: 322 PVEKCLRDAKMDKSSVHDVVLVGGSTRIPRVQQLLQDFFNGKELCKNINPDEAVAYGAAV 381
Query: 372 XXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
IL G+ +E+VQD G+ETAGG
Sbjct: 382 QAAILSGEGNEKVQDLLLLDVTPLSLGLETAGG 414
>02_01_0112 -
839048-839552,839638-839720,839828-839982,840078-840557,
840855-841097,841189-841403,841489-841756,842477-842525
Length = 665
Score = 170 bits (414), Expect = 4e-43
Identities = 83/153 (54%), Positives = 104/153 (67%)
Frame = +3
Query: 12 NKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTME 191
+ RAL +LR ERAKR LS+ Q +EI+SLF+G DF +TRARFEELN DLFR TM
Sbjct: 285 DNRALGKLRREAERAKRALSNQHQVRVEIESLFDGTDFSEPLTRARFEELNNDLFRKTMG 344
Query: 192 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXX 371
PV+K++ DA ++K+QIH+IVLVGGSTRIPKVQ+LL+D+F GKE NK +NPDE
Sbjct: 345 PVKKAMDDAGLEKSQIHEIVLVGGSTRIPKVQQLLRDYFEGKEPNKGVNPDEAVAYGAAV 404
Query: 372 XXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
IL G+ +E +D GIET GG
Sbjct: 405 QGSILSGEGGDETKDILLLDVAPLTLGIETVGG 437
>11_01_0564 - 4447078-4448519,4449465-4449711
Length = 562
Score = 169 bits (412), Expect = 7e-43
Identities = 85/152 (55%), Positives = 106/152 (69%), Gaps = 1/152 (0%)
Frame = +3
Query: 9 SNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 188
SN++ALRRLRTACERAKR LSS+ Q +IE+DSL +GIDF ++TR+RFEELN DLF M
Sbjct: 279 SNQKALRRLRTACERAKRMLSSTMQTTIEVDSLHQGIDFRVTLTRSRFEELNKDLFSKCM 338
Query: 189 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 368
E +E LRDAK+DK + D+VLVGGSTRIPKVQK+L +FF+GKEL +SINPDE
Sbjct: 339 EAMENCLRDAKVDKWSVDDVVLVGGSTRIPKVQKMLSEFFDGKELCRSINPDEAVAYGAA 398
Query: 369 XXXXILHGDKSEE-VQDXXXXXXXXXXXGIET 461
IL G ++ + D G+ET
Sbjct: 399 IQASILCGGTDDKRLVDMLLREVTPLSLGVET 430
>03_02_0542 - 9348126-9349585,9352433-9352655
Length = 560
Score = 169 bits (412), Expect = 7e-43
Identities = 84/156 (53%), Positives = 108/156 (69%), Gaps = 1/156 (0%)
Frame = +3
Query: 6 RSNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRST 185
R ++RALRRLRTACE+AKR LSS+ Q +IEIDSL G+DF+ ++TRA+FEELN DLF
Sbjct: 271 RGDQRALRRLRTACEKAKRMLSSTAQTTIEIDSLHGGVDFHATVTRAKFEELNMDLFLEC 330
Query: 186 MEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXX 365
M+ V++ LRDA DK + D+VLVGGSTRIPKV+ LLQD F+GK L +SINPDE
Sbjct: 331 MDTVKQCLRDAGTDKGTVDDVVLVGGSTRIPKVRSLLQDLFDGKALCRSINPDEAVAHGA 390
Query: 366 XXXXXILHGDKSE-EVQDXXXXXXXXXXXGIETAGG 470
+L+GD +E +++D GIE GG
Sbjct: 391 AVKAALLNGDANEKDLRDVVLLDVTPLSLGIEVFGG 426
>11_01_0563 + 4423609-4423846,4424671-4426132,4428949-4429364,
4430555-4432052,4432199-4432217,4432469-4432675,
4432814-4433065
Length = 1363
Score = 161 bits (392), Expect = 2e-40
Identities = 74/133 (55%), Positives = 97/133 (72%)
Frame = +3
Query: 6 RSNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRST 185
RSN++A+RRLR+ACERAKR LS + Q SIE+DSL +G+DF ++R+RFEELN +LF
Sbjct: 916 RSNQKAIRRLRSACERAKRLLSFTAQTSIEVDSLHDGVDFCAKMSRSRFEELNKELFGRC 975
Query: 186 MEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXX 365
++ VEK L DAKMDK +HD+VLVGGS+RIPK+Q +L DFF K+L S+NPDE
Sbjct: 976 VKAVEKCLEDAKMDKGDVHDVVLVGGSSRIPKLQSMLHDFFQEKKLRHSVNPDEAVAYGA 1035
Query: 366 XXXXXILHGDKSE 404
IL+GD +
Sbjct: 1036 AIQASILNGDADD 1048
Score = 156 bits (378), Expect = 1e-38
Identities = 72/132 (54%), Positives = 98/132 (74%)
Frame = +3
Query: 9 SNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 188
SN++A+RRLRTACERAKR LS +T ASIE+DSL +GIDF ++R+RFEELN +LF +
Sbjct: 285 SNQKAIRRLRTACERAKRMLSFTTLASIEVDSLHDGIDFCGKMSRSRFEELNKELFGKCV 344
Query: 189 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 368
+ V+K L DAKMDK + D+VLVGGS+RIPK+Q ++ DFF+ K+L +++NPDE
Sbjct: 345 KAVKKCLEDAKMDKNAVDDVVLVGGSSRIPKLQSMIHDFFDEKKLRRNVNPDEAVAYGAA 404
Query: 369 XXXXILHGDKSE 404
+L+GD E
Sbjct: 405 IQASVLNGDADE 416
>11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836
Length = 526
Score = 161 bits (391), Expect = 3e-40
Identities = 75/136 (55%), Positives = 97/136 (71%)
Frame = +3
Query: 9 SNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTM 188
SN++A+RRLR+ACERAKR LS + Q SIE+DSL +G+DF ++R+RFEELN +LF +
Sbjct: 226 SNQKAIRRLRSACERAKRLLSFTAQTSIEVDSLHDGVDFCAKMSRSRFEELNKELFGKCV 285
Query: 189 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXX 368
+ VEK L DAKMDK+ +HD+VLVGGS+RIPKVQ +L DFF K+L S+NPDE
Sbjct: 286 KAVEKCLEDAKMDKSAVHDVVLVGGSSRIPKVQSMLHDFFQEKKLRHSVNPDEAVAYGAA 345
Query: 369 XXXXILHGDKSEEVQD 416
IL+GD D
Sbjct: 346 IQASILNGDSDNADAD 361
>05_04_0392 - 20889699-20891726
Length = 675
Score = 161 bits (391), Expect = 3e-40
Identities = 77/151 (50%), Positives = 98/151 (64%)
Frame = +3
Query: 18 RALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV 197
RAL +LR CERAKR LS+ Q +EI+SLF+G+DF ++RARFEELN DLF+ TM PV
Sbjct: 299 RALGKLRRECERAKRALSNQHQVRVEIESLFDGVDFSEPLSRARFEELNGDLFKKTMVPV 358
Query: 198 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXX 377
K++ DA + K I +IVLVGGSTRIPKVQ+LL+D+F GKE N+ +NPDE
Sbjct: 359 RKAMADAGLGKGDIDEIVLVGGSTRIPKVQQLLKDYFGGKEPNRGVNPDEAVAYGAAVQA 418
Query: 378 XILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
I+ G E + G+ETAGG
Sbjct: 419 SIISGHVDENTESMILLDVAPLTLGLETAGG 449
>08_01_0654 - 5639419-5641449
Length = 676
Score = 161 bits (390), Expect = 3e-40
Identities = 75/151 (49%), Positives = 99/151 (65%)
Frame = +3
Query: 18 RALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV 197
RAL +LR CERAKR LS+ Q +E++SLF+G+D ++RARFEELN+DLF+ TM PV
Sbjct: 299 RALGKLRRECERAKRALSNQHQVRVEVESLFDGVDLSEPLSRARFEELNSDLFKKTMVPV 358
Query: 198 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXX 377
K++ DA++ K I +IVLVGGSTRIPKVQ+LL+D+F GKE N+ +NPDE
Sbjct: 359 RKAMADARLSKGDIDEIVLVGGSTRIPKVQQLLKDYFGGKEPNRGVNPDEAVAYGAAVQA 418
Query: 378 XILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
I+ G E + G+ETAGG
Sbjct: 419 SIISGHVDENTESMILLDVAPLTLGLETAGG 449
>03_05_0877 +
28443481-28443538,28443641-28443911,28444028-28444242,
28444329-28445057,28445143-28445297,28445384-28445965
Length = 669
Score = 160 bits (389), Expect = 5e-40
Identities = 78/151 (51%), Positives = 100/151 (66%)
Frame = +3
Query: 18 RALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV 197
RAL +LR CERAKR LS Q +EI++LF G+DF ++TRA+FEELN DLF+ T+ PV
Sbjct: 293 RALGKLRRECERAKRALSRQHQVRVEIEALFVGVDFSETLTRAKFEELNMDLFKKTLGPV 352
Query: 198 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXX 377
K++ DAK+ K+ I +IVLVGGSTRIPKVQ+LL++ F+GKE K INPDE
Sbjct: 353 RKAIADAKLKKSDIDEIVLVGGSTRIPKVQELLKEMFDGKEPTKGINPDEAVAYGAAVQG 412
Query: 378 XILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
I+ G+ E +D GIETAGG
Sbjct: 413 SIISGEGGAETKDILLLDVTPLTLGIETAGG 443
>05_04_0052 - 17515344-17517353
Length = 669
Score = 159 bits (385), Expect = 1e-39
Identities = 75/151 (49%), Positives = 99/151 (65%)
Frame = +3
Query: 18 RALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV 197
RAL +LR CERAKR LS Q +E++SLF+G+D ++RARFEELN DLFR TM PV
Sbjct: 295 RALGKLRRECERAKRALSIQHQVRVEVESLFDGVDLSEPLSRARFEELNNDLFRKTMAPV 354
Query: 198 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXX 377
K++ DA++ A I +IVLVGGSTRIPKV++LL+D+F GK+ N+ +NPDE
Sbjct: 355 RKAMADARLSNADIDEIVLVGGSTRIPKVRQLLRDYFGGKQPNQGVNPDEAVAYGAAIQA 414
Query: 378 XILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
I+ GD + +D G+ETAGG
Sbjct: 415 NIVGGDTDNKTRDMVVLDVTPLTLGLETAGG 445
>01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819
Length = 539
Score = 144 bits (350), Expect = 2e-35
Identities = 69/153 (45%), Positives = 99/153 (64%)
Frame = +3
Query: 12 NKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTME 191
N RA+ RLR ACE+AKRTLSS++ A+IE++ L +G DFY++ITR +F+ELN DLF ++
Sbjct: 261 NARAILRLRAACEQAKRTLSSASWAAIELERLHDGADFYSTITRDQFDELNLDLFCKCLD 320
Query: 192 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXX 371
P++K L AKMD++ + D+V VGGSTRIP+V++L+QD F+GKEL K I+ DE
Sbjct: 321 PIKKCLTGAKMDRSSVDDVVFVGGSTRIPRVRRLIQDLFDGKELRKDISSDEAAACGAAT 380
Query: 372 XXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
+ + + D G+ AGG
Sbjct: 381 MASL---GSDDSLVDLFLFDATPHSLGVAAAGG 410
>12_02_0825 +
23476943-23476952,23477263-23477328,23477737-23477885,
23478148-23478212,23479247-23479710,23479724-23480208
Length = 412
Score = 128 bits (308), Expect = 3e-30
Identities = 74/134 (55%), Positives = 88/134 (65%), Gaps = 2/134 (1%)
Frame = +3
Query: 12 NKRALRRLRTACERAKRTLSSSTQA--SIEIDSLFEGIDFYTSITRARFEELNADLFRST 185
N R + RLRTACE AKRTLS +IEIDSL+EGIDFY++IT ARFEEL DLFR
Sbjct: 285 NPRPVGRLRTACEWAKRTLSPPLPRPPTIEIDSLYEGIDFYSNITCARFEELTMDLFRKC 344
Query: 186 MEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXX 365
M + +D + +A +LVGGSTRIP+VQ+LLQDFFNGKEL K+INPDE
Sbjct: 345 M----RGYQDGQ--RAACTMFILVGGSTRIPRVQQLLQDFFNGKELCKNINPDEAVAYGA 398
Query: 366 XXXXXILHGDKSEE 407
IL + EE
Sbjct: 399 AVQAPILVWRRPEE 412
>05_03_0397 +
13488642-13488941,13489711-13489963,13490594-13490673,
13491251-13491393,13491512-13491610,13491785-13491974,
13492504-13492902,13492993-13493400
Length = 623
Score = 105 bits (252), Expect = 2e-23
Identities = 63/157 (40%), Positives = 87/157 (55%), Gaps = 4/157 (2%)
Frame = +3
Query: 12 NKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLFR 179
+K+AL+RL A E+AK LSS TQ +I + + D T++TRA+FEEL +DL
Sbjct: 232 DKQALQRLTEAAEKAKMELSSLTQTNISLPFITATADGPKHIETTLTRAKFEELCSDLLD 291
Query: 180 STMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXX 359
PV+ +LRDAK+ I +++LVGGSTRIP VQ L++ GK+ N ++NPDE
Sbjct: 292 RLRTPVDNALRDAKLSFKDIDEVILVGGSTRIPAVQDLVKK-MTGKDPNVTVNPDEVVAL 350
Query: 360 XXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
+L GD V D G+ET GG
Sbjct: 351 GAAVQAGVLSGD----VSDIVLLDVTPLSLGLETLGG 383
>01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165
Length = 648
Score = 103 bits (248), Expect = 5e-23
Identities = 56/135 (41%), Positives = 82/135 (60%), Gaps = 5/135 (3%)
Frame = +3
Query: 81 QASIEIDSLFEG-IDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLV 257
Q +EI++L +G +D ++TRA+FEELN DLF TM P+ K++ DA ++K I++I+ V
Sbjct: 303 QVRVEIEALLDGGVDLSETLTRAQFEELNDDLFARTMAPLRKTMADAGLEKGDINEIIHV 362
Query: 258 GGSTRIPKVQKLLQDFFNG-KELNKSINPDEXXXXXXXXXXXILHGDKSEE---VQDXXX 425
GGSTRIPKVQ+L++D+F+G KE+ K NPDE + GD ++ +
Sbjct: 363 GGSTRIPKVQQLIRDYFDGKKEIVKVNNPDETVAYGAAVIGRHVAGDDDDKPTMLGPLDL 422
Query: 426 XXXXXXXXGIETAGG 470
IETAGG
Sbjct: 423 PSFLSDTISIETAGG 437
>02_05_0916 -
32706039-32706332,32707483-32708103,32708450-32709070,
32709183-32709752,32709840-32709918,32710002-32710075,
32711336-32711398
Length = 773
Score = 93.5 bits (222), Expect = 8e-20
Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 4/157 (2%)
Frame = +3
Query: 12 NKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLFR 179
++ AL+RLR A E+AK LSS+ Q I + + ++TR++FE L L
Sbjct: 300 DRLALQRLREAAEKAKIELSSTAQTEINLPFITADASGAKHLNITLTRSKFESLVNSLIE 359
Query: 180 STMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXX 359
T EP + L+DA + ++ +++LVGG TR+PKVQ+++ + F GK +K +NPDE
Sbjct: 360 RTREPCKNCLKDAGITTKEVDEVLLVGGMTRVPKVQEIVSEIF-GKSPSKGVNPDEAVAM 418
Query: 360 XXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
IL GD V++ GIET GG
Sbjct: 419 GAAIQGGILRGD----VKELLLLDVTPLSLGIETLGG 451
>02_05_0491 +
29470575-29471351,29471574-29471806,29472697-29472856,
29473149-29473394,29473492-29473628,29473874-29474207,
29474283-29474444,29474717-29474791,29474866-29474966,
29475042-29475111,29475210-29475266,29475357-29475418,
29475505-29475577,29475663-29475884
Length = 902
Score = 92.3 bits (219), Expect = 2e-19
Identities = 42/114 (36%), Positives = 74/114 (64%)
Frame = +3
Query: 6 RSNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRST 185
R + +A+ +L+ +R K LS++T A I ++SL+ +DF ++ITR +FEEL +L+
Sbjct: 297 RQSPKAMAKLKKQVKRTKEILSANTAAPISVESLYNDLDFRSTITREKFEELCEELWEQA 356
Query: 186 MEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 347
+ PV++ L + M I+ + L+GG+TR+PK+Q LQ+F +L+K ++ DE
Sbjct: 357 LTPVKEVLAHSGMKIDDIYAVELIGGATRVPKLQAKLQEFLGRSDLDKHLDADE 410
>03_01_0093 -
745434-746057,746492-747112,747222-747791,747870-747948,
748258-748331,748385-748387
Length = 656
Score = 91.9 bits (218), Expect = 2e-19
Identities = 55/157 (35%), Positives = 82/157 (52%), Gaps = 4/157 (2%)
Frame = +3
Query: 12 NKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLFR 179
++ AL+RLR A E+AK LSS+ Q I + + ++TR++FE L L
Sbjct: 280 DRLALQRLREAAEKAKIELSSTAQTEINLPFITADSSGAKHLNITLTRSKFESLVNSLIE 339
Query: 180 STMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXX 359
T +P + L+DA + + +++LVGG TR+PKVQ+++ + F GK +K +NPDE
Sbjct: 340 RTRDPCKSCLKDAGITTKDVDEVLLVGGMTRVPKVQEVVSEIF-GKAPSKGVNPDEAVAM 398
Query: 360 XXXXXXXILHGDKSEEVQDXXXXXXXXXXXGIETAGG 470
IL GD V+D GIET GG
Sbjct: 399 GAAIQGGILRGD----VKDLLLLDVTPLSLGIETLGG 431
>06_01_0770 -
5756200-5756741,5756790-5757286,5757356-5757782,
5757854-5757911
Length = 507
Score = 85.0 bits (201), Expect = 3e-17
Identities = 43/104 (41%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
Frame = +3
Query: 6 RSNKRALRRLRTACERAKRTLSSSTQASIEIDSLFE-GIDFYTSITRARFEELNADLFRS 182
R ++A+ RLR ACE AK+ LS + +++DSL + G F ++TRA+FEELN DL
Sbjct: 352 RQEEKAMVRLRVACEHAKKALSEQQETLVQMDSLLDDGAVFSATLTRAKFEELNHDLLDR 411
Query: 183 TMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNG 314
M V++ + + + ++++VGGS RIPKV++L++D+FNG
Sbjct: 412 AMALVKEVVVTTGGVEV-VDEVLVVGGSARIPKVRQLVKDYFNG 454
>01_01_0573 +
4253484-4254653,4255526-4255735,4255842-4255937,
4256034-4256255,4256829-4257023,4257097-4257243,
4257323-4257472,4257762-4257892,4257978-4258194
Length = 845
Score = 82.6 bits (195), Expect = 1e-16
Identities = 40/112 (35%), Positives = 67/112 (59%)
Frame = +3
Query: 12 NKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTME 191
N RA RLR ACE+ K+ LS++ ++ + I+ L + D I R FE+++A +
Sbjct: 257 NARACIRLRVACEKLKKVLSANPESPMHIECLMDEKDVRGFIKREEFEKISASILERVKG 316
Query: 192 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 347
P+EK+L +A + +H + +VG +R+P + K+L DFF GKE +++N E
Sbjct: 317 PLEKALAEAGLTTENVHFVEVVGSGSRVPAIIKILTDFF-GKEPRRTMNASE 367
>06_03_1137 +
27903012-27904196,27904330-27904542,27905775-27905867,
27905940-27906008,27906412-27906612,27906688-27906834,
27907524-27907652,27909001-27909131,27909240-27909333
Length = 753
Score = 81.4 bits (192), Expect = 3e-16
Identities = 39/112 (34%), Positives = 68/112 (60%)
Frame = +3
Query: 12 NKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTME 191
N +A RLR ACE+AK+ LS++ +A + I+ L E D I R FE+L A L +E
Sbjct: 262 NVKASMRLRAACEKAKKVLSANAEAVVNIECLMEEKDVRGMIRREEFEKLCAGLLERVVE 321
Query: 192 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 347
P +K++ +++ ++H + LVG +R+P + ++L FF +E ++++N E
Sbjct: 322 PCKKAMEGSRIGFDRLHSVELVGSGSRVPAIARILAGFFR-REPSRTLNASE 372
>12_01_0346 + 2652181-2653566
Length = 461
Score = 81.0 bits (191), Expect = 4e-16
Identities = 44/103 (42%), Positives = 69/103 (66%), Gaps = 6/103 (5%)
Frame = +3
Query: 30 RLRTACERAKRTLSSS--TQASIEIDSLFEG-IDFYTSITRARFEELNADLFRSTMEPVE 200
+L++ CE AKRTLSS Q ++ +L G F S+TRA+FEELN DLF + V+
Sbjct: 299 KLKSQCELAKRTLSSHDVAQVNLHATNLANGAFSFSGSLTRAQFEELNHDLFEKVISLVD 358
Query: 201 KSLRDAKMDKAQ---IHDIVLVGGSTRIPKVQKLLQDFFNGKE 320
++ +A+ A I ++VLVGGST+IP++++L++++F GKE
Sbjct: 359 AAMAEARRAVAGFDVIDEVVLVGGSTKIPRIRELIKNYFAGKE 401
>05_01_0550 +
4820086-4821255,4822112-4822321,4822429-4822524,
4822610-4822828,4823201-4823395,4823466-4823612,
4823712-4823861,4825015-4825145,4825234-4825477
Length = 853
Score = 79.4 bits (187), Expect = 1e-15
Identities = 37/112 (33%), Positives = 68/112 (60%)
Frame = +3
Query: 12 NKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTME 191
N RA RLR ACE+ K+ LS++ +A + I+ L + D I R FE++++ + +
Sbjct: 257 NARACVRLRVACEKLKKMLSANPEAPLNIECLMDEKDVRGFIKREEFEQISSPVLQRVKA 316
Query: 192 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 347
P+EK+L +A + +H + +VG +R+P + +++ +FF GKE +++N E
Sbjct: 317 PLEKALAEAGLTTENVHFVEVVGSGSRVPAIIRIITEFF-GKEPRRTMNASE 367
>05_07_0320 + 29235266-29235305,29235409-29236682
Length = 437
Score = 78.2 bits (184), Expect = 3e-15
Identities = 47/117 (40%), Positives = 72/117 (61%), Gaps = 3/117 (2%)
Frame = +3
Query: 6 RSNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS-ITRARFEELNADLFRS 182
R++ ALRRL CERAK+ LS + + + L + D ++ +TR++ EEL DL
Sbjct: 295 RADAAALRRLTAECERAKKALSYQQETVVTM-RLDDDDDLFSEPLTRSKLEELIGDLVGR 353
Query: 183 TMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELN--KSINPDE 347
++ VE S + D + +I+LVGGSTRIP V+ L++D+F+GKE + K + PDE
Sbjct: 354 AVDLVE-SCDASGGDVVGVDEILLVGGSTRIPMVRDLVKDYFHGKEASNEKGVEPDE 409
>03_02_0180 - 6211823-6213559
Length = 578
Score = 57.2 bits (132), Expect = 6e-09
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 2/158 (1%)
Frame = +3
Query: 3 TRSNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRS 182
T +++ LR A + A L++ I +D L G + R FE++N +F
Sbjct: 290 TMDRIKSIGLLRMATQDAIHKLATQEHVEINVD-LGAGHKVSKILDRGEFEKVNQSIFEK 348
Query: 183 TMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXX 362
+++ L DAK+ I+D++LVGG +RIPK++ ++ + I+P E
Sbjct: 349 CEGIIKQCLADAKLTPEDINDVILVGGCSRIPKIRSVVLGLCKKDDSYSGIDPLEAAVSG 408
Query: 363 XXXXXXILHG--DKSEEVQDXXXXXXXXXXXGIETAGG 470
I G D S + D GI GG
Sbjct: 409 AALEGAIASGVSDPSGSL-DLLTIQATPMNLGIRADGG 445
>06_03_0830 + 25159758-25162460
Length = 900
Score = 31.5 bits (68), Expect = 0.35
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -1
Query: 162 SAPQNEHE*STCRSRYPRRVNRFQCSPEWKRTVSSSPSHRPCV 34
+ P ++ E + S P NR QC+ +W SSS S +P V
Sbjct: 636 NCPCDDEEAAITTSNVPSFWNRQQCNGDWSHPSSSSSSRQPAV 678
>12_01_0727 + 6446283-6449300
Length = 1005
Score = 30.3 bits (65), Expect = 0.82
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = -2
Query: 404 LRLVAVQNCSLYGGSVCDGLVRVDGLVQLLTVEEILQELLHFRNASGPAHEYDVVNLGLV 225
L+++++ CSL G +C L L L +E LHF SGP E+ L
Sbjct: 233 LQVISMPYCSL-SGPICRSL---SSLRSLSVIE------LHFNQLSGPVPEFLAALSNLT 282
Query: 224 HLRIAEGLFDGL 189
L+++ +F+G+
Sbjct: 283 VLQLSNNMFEGV 294
>12_01_0715 - 6230393-6231559,6233234-6234553
Length = 828
Score = 30.3 bits (65), Expect = 0.82
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = -2
Query: 404 LRLVAVQNCSLYGGSVCDGLVRVDGLVQLLTVEEILQELLHFRNASGPAHEYDVVNLGLV 225
LR++++ CSL G +C L L L +E LH+ + SGP E+ L
Sbjct: 236 LRVISMPYCSL-SGPICHSL---SALRSLSVIE------LHYNHLSGPVPEFLAALPSLS 285
Query: 224 HLRIAEGLFDGL 189
L+++ +F+G+
Sbjct: 286 VLQLSNNMFEGV 297
>06_01_0847 -
6451525-6451678,6452870-6453066,6454300-6454591,
6454622-6454654,6454869-6455102,6455204-6455259,
6455552-6456754
Length = 722
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/48 (27%), Positives = 28/48 (58%)
Frame = +3
Query: 147 RFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQK 290
++ E+N D+F S +E + + + K +D+ L+GG T + K+++
Sbjct: 269 KYVEINIDIFPSRKMELENNTGSSTVPKVYFNDL-LIGGLTELKKMEE 315
>01_03_0103 - 12567986-12568141,12568307-12568442,12568751-12568824,
12568932-12569175,12569480-12569766,12570618-12571103,
12571348-12571459,12571540-12571745,12573071-12573276,
12573831-12574162,12574284-12574825,12574967-12576308,
12576386-12576457,12578438-12578505,12579011-12580174
Length = 1808
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = -2
Query: 362 SVCDGLVRVDGLVQLLTVEEILQELL 285
++ DGL ++GLV +L V+ IL+ELL
Sbjct: 1216 ALMDGLSALEGLVSILPVKTILRELL 1241
>12_01_0731 - 6516894-6517473,6517485-6519574
Length = 889
Score = 28.3 bits (60), Expect = 3.3
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = -2
Query: 404 LRLVAVQNCSLYGGSVCDGLVRVDGLVQLLTVEEILQELLHFRNASGPAHEYDVVNLGLV 225
LR++++ CSL G +C L L L +E L + + SGP E+ L
Sbjct: 240 LRVISMPYCSL-SGPICHSL---SALRSLSVIE------LQYNHLSGPVPEFLAALPNLS 289
Query: 224 HLRIAEGLFDGL 189
L++A +F+G+
Sbjct: 290 VLQLANNMFEGV 301
>01_06_1527 - 38006174-38006815,38006920-38007420
Length = 380
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 144 HE*STCRSRYPRRVNRFQCSPEWKR 70
H+ TCR RY RR+ P+W++
Sbjct: 229 HKGKTCRGRYSRRMEPDITLPQWRK 253
>01_06_0668 +
31058497-31059510,31059609-31059676,31060189-31060270,
31060339-31060431,31060516-31060668,31060900-31060968,
31061091-31061184,31061594-31061677,31062133-31062221,
31062340-31062456,31062567-31062707,31062823-31063005
Length = 728
Score = 27.9 bits (59), Expect = 4.4
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +3
Query: 48 ERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEP--VEKSLRDAK 221
E + L+S T A + +DS G FY S T + +EL + + P +SL D
Sbjct: 427 EENRAMLTSRTVAYLNVDSAVYGAGFYASAT-PQLDELLKEASKQVQNPDNETQSLYDLW 485
Query: 222 M--DKAQIHDIVLVGG 263
M D + + I +GG
Sbjct: 486 MASDSSSMIKIGRIGG 501
>12_01_0740 + 6646471-6649407
Length = 978
Score = 27.5 bits (58), Expect = 5.8
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = -2
Query: 404 LRLVAVQNCSLYGGSVCDGLVRVDGLVQLLTVEEILQELLHFRNASGPAHEYDVVNLGLV 225
LR++++ CSL G +C L L L +E LH+ + SGP E L
Sbjct: 206 LRVISMPYCSL-SGPICHSL---SALRSLSVIE------LHYNHLSGPVPELLATLSNLT 255
Query: 224 HLRIAEGLFDGL 189
L+++ + +G+
Sbjct: 256 VLQLSNNMLEGV 267
>12_01_0722 + 6355972-6359031
Length = 1019
Score = 27.5 bits (58), Expect = 5.8
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = -2
Query: 404 LRLVAVQNCSLYGGSVCDGLVRVDGLVQLLTVEEILQELLHFRNASGPAHEYDVVNLGLV 225
LR++++ CSL G +C L L L +E LH+ + SGP E L
Sbjct: 247 LRVISMPYCSL-SGPICHSL---SALRSLSVIE------LHYNHLSGPVPELLATLSNLT 296
Query: 224 HLRIAEGLFDGL 189
L+++ + +G+
Sbjct: 297 VLQLSNNMLEGV 308
>01_01_0472 - 3473096-3474288,3474833-3474938
Length = 432
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 175 SDLQWSPSKSPSAMRRWTR 231
S+LQ SPS SP + WTR
Sbjct: 113 SELQRSPSPSPEPQKSWTR 131
>10_07_0138 + 13325418-13325954
Length = 178
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 135 STCRSRYPRRVNRFQCSPEWKRTVSSSPSH 46
S C R+ R R +CS W+R +S +H
Sbjct: 99 SRCSRRWRRSWRRRRCSRRWRRLWTSGDAH 128
>10_06_0081 - 10449655-10450140,10450249-10450430,10450703-10450709
Length = 224
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 198 EKSLRDAKMDKAQIHDIVLVGGST 269
+KSLR K D + +HD+ L GS+
Sbjct: 127 KKSLRQGKEDDSWVHDLTLDAGSS 150
>04_03_0815 - 19949584-19950111,19950210-19950632
Length = 316
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -1
Query: 450 RATTGSRRAAEDLAPPQTCRRAELQ 376
RATTG RAAE CR AEL+
Sbjct: 166 RATTGRVRAAEAELERARCRNAELE 190
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,624,112
Number of Sequences: 37544
Number of extensions: 243778
Number of successful extensions: 816
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 955200320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -